EY744240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744240 vs. ExPASy Swiss-Prot
Match: RL4_PRUAR (60S ribosomal protein L4 OS=Prunus armeniaca GN=RPL4 PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.909e-61 Identity = 126/207 (60.87%), Postives = 137/207 (66.18%), Query Frame = 2 Query: 11 GEMRNTRYISRKGPLVVYSAEGAKLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQRVXXXXXXXXXXXXPITXXXXXXXXXXXXXW*QTMISNSDYTDFENFPKWLGVS 631 G+MRN RYI+RKGPL+VY EGAKLVKAFRNIPG APGGHLGRF+VWTKSAFEKLD IYG FDK SEKK GYVLPR+KMVNADLARIINSDEVQSVV PI+ KRA YAKTARRMSLLAEA+RV PI+ W QTMIS+SDYT+F+NF KWLGVS Sbjct: 201 GKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINSDEVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLDKKRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVS 407
BLAST of EY744240 vs. ExPASy Swiss-Prot
Match: RL4A_ARATH (60S ribosomal protein L4-1 OS=Arabidopsis thaliana GN=RPL4A PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 9.476e-61 Identity = 121/207 (58.45%), Postives = 137/207 (66.18%), Query Frame = 2 Query: 11 GEMRNTRYISRKGPLVVYSAEGAKLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQRVXXXXXXXXXXXXPITXXXXXXXXXXXXXW*QTMISNSDYTDFENFPKWLGVS 631 G+MRN RYISRKGPLVVY EG+K+VKAFRN+PG APGGHLGRF++WTKSAFEKL+ IYG F+K SEKKKGYVLPRAKMVNADLARIINSDE+QSVV PIK + KRA YAKTA+RMSLLAEAQRV +T W +TMIS+SDYT+F+NF KWLG S Sbjct: 199 GKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGAS 405
BLAST of EY744240 vs. ExPASy Swiss-Prot
Match: RL4B_ARATH (60S ribosomal protein L4-2 OS=Arabidopsis thaliana GN=RPL4D PE=1 SV=2) HSP 1 Score: 230.72 bits (587), Expect = 8.022e-60 Identity = 122/207 (58.94%), Postives = 135/207 (65.22%), Query Frame = 2 Query: 11 GEMRNTRYISRKGPLVVYSAEGAKLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQRVXXXXXXXXXXXXPITXXXXXXXXXXXXXW*QTMISNSDYTDFENFPKWLGVS 631 G+MRN RYISRKGPLVV+ EGAK+VKAFRN+PG APGGHLGRF++WTKSAFEKL+ IYG F+K SEKKKGYVLPRAKMVNADLARIINSDEVQSVV PIK KRA YAKTA+RMSLLAEA RV +T W QTMIS+SDYT+F+NF KWLG S Sbjct: 200 GKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGAS 406
BLAST of EY744240 vs. ExPASy Swiss-Prot
Match: RL4_DICDI (60S ribosomal protein L4 OS=Dictyostelium discoideum GN=rpl4 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.631e-28 Identity = 64/120 (53.33%), Postives = 79/120 (65.83%), Query Frame = 2 Query: 8 SGEMRNTRYISRKGPLVVYSAEGAKLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKR 367 +G+ RN RY RKGPLVV S + + +A RNIPG APGGHLGRFI+WTKSAFE+LD +G F K S +KKGY LPR + NAD+ R++NSDE+Q+ VR K VKR Sbjct: 192 AGKARNRRYKVRKGPLVVVSGK-TTVSQALRNIPGVEVANVSRLNLLKLAPGGHLGRFIIWTKSAFEQLDSTFGTFAKSSAQKKGYTLPRPMIANADIVRLVNSDEIQAAVRASKVVVKR 310
BLAST of EY744240 vs. ExPASy Swiss-Prot
Match: RL4A_XENLA (60S ribosomal protein L4-A OS=Xenopus laevis GN=rpl4-A PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.131e-28 Identity = 67/155 (43.23%), Postives = 88/155 (56.77%), Query Frame = 2 Query: 11 GEMRNTRYISRKGPLVVYSAEGAKLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQRV 475 G+MRN R I R+GP V+Y+ E LVKAFRNIPG APGGH+GRF +WT+SAF KLD++YG + K ++ K Y LP KM N DL RI+ S E+Q +R +VKR YAKTARR ++L + + + Sbjct: 198 GKMRNRRRIQRRGPCVIYN-ENNGLVKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENI 351
BLAST of EY744240 vs. ExPASy Swiss-Prot
Match: RL4B_XENLA (60S ribosomal protein L4-B (Fragment) OS=Xenopus laevis GN=rpl4-B PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.747e-28 Identity = 65/155 (41.94%), Postives = 88/155 (56.77%), Query Frame = 2 Query: 11 GEMRNTRYISRKGPLVVYSAEGAKLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQRV 475 G+MRN R I R+GP V+Y+ E ++KAFRNIPG APGGH+GRF +WT+SAF KLD++YG + K ++ K Y LP KM N DL RI+ S E+Q +R +VKR YAKTARR ++L + + + Sbjct: 193 GKMRNRRRIQRRGPCVIYN-ENNGIIKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENI 346
BLAST of EY744240 vs. ExPASy Swiss-Prot
Match: RL4_PONAB (60S ribosomal protein L4 OS=Pongo abelii GN=RPL4 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.057e-27 Identity = 62/153 (40.52%), Postives = 88/153 (57.52%), Query Frame = 2 Query: 11 GEMRNTRYISRKGPLVVYSAEGAKLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQ 469 G+MRN R I R+GP ++Y+ + ++KAFRNIPG APGGH+GRF +WT+SAF KLDE+YG + K + K Y LP KM+N DL+RI+ S E+Q +R + ++ R YAKT RR ++L +A+ Sbjct: 194 GKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQAR 345
BLAST of EY744240 vs. ExPASy Swiss-Prot
Match: RL4_HUMAN (60S ribosomal protein L4 OS=Homo sapiens GN=RPL4 PE=1 SV=5) HSP 1 Score: 124.02 bits (310), Expect = 1.057e-27 Identity = 62/153 (40.52%), Postives = 88/153 (57.52%), Query Frame = 2 Query: 11 GEMRNTRYISRKGPLVVYSAEGAKLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQ 469 G+MRN R I R+GP ++Y+ + ++KAFRNIPG APGGH+GRF +WT+SAF KLDE+YG + K + K Y LP KM+N DL+RI+ S E+Q +R + ++ R YAKT RR ++L +A+ Sbjct: 194 GKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQAR 345
BLAST of EY744240 vs. ExPASy Swiss-Prot
Match: RL4_RAT (60S ribosomal protein L4 OS=Rattus norvegicus GN=Rpl4 PE=1 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 1.804e-27 Identity = 62/153 (40.52%), Postives = 88/153 (57.52%), Query Frame = 2 Query: 11 GEMRNTRYISRKGPLVVYSAEGAKLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQ 469 G+MRN R I R+GP ++Y+ + ++KAFRNIPG APGGH+GRF +WT+SAF KLDE+YG + K + K Y LP KM+N DL+RI+ S E+Q +R + ++ R YAKT RR ++L +A+ Sbjct: 194 GKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQAR 345
BLAST of EY744240 vs. ExPASy Swiss-Prot
Match: RL4_MOUSE (60S ribosomal protein L4 OS=Mus musculus GN=Rpl4 PE=1 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 1.804e-27 Identity = 62/153 (40.52%), Postives = 88/153 (57.52%), Query Frame = 2 Query: 11 GEMRNTRYISRKGPLVVYSAEGAKLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQ 469 G+MRN R I R+GP ++Y+ + ++KAFRNIPG APGGH+GRF +WT+SAF KLDE+YG + K + K Y LP KM+N DL+RI+ S E+Q +R + ++ R YAKT RR ++L +A+ Sbjct: 194 GKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQAR 345 The following BLAST results are available for this feature:
BLAST of EY744240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744240 ID=EY744240; Name=EY744240; organism=Citrus sinensis; type=EST; length=857bpback to top |