EY659967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659967 vs. ExPASy Swiss-Prot
Match: PSMD2_RAT (26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus GN=Psmd2 PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 9.406e-72 Identity = 139/269 (51.67%), Postives = 183/269 (68.03%), Query Frame = 3 Query: 75 CAYAGTGNVLKVLNLLGHCAQHHEKGE-----------------------AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTHSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSVPXXXXXXXXCCWASRSAQDITGFQ 812 CAYAG+GNVLKV LL C++H + E A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++DTLS+ SHD EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQGL H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQPRML+T DE L+PL V + + ITGFQ Sbjct: 598 CAYAGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQ 866
BLAST of EY659967 vs. ExPASy Swiss-Prot
Match: PSMD2_PONAB (26S proteasome non-ATPase regulatory subunit 2 OS=Pongo abelii GN=PSMD2 PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 9.406e-72 Identity = 139/269 (51.67%), Postives = 183/269 (68.03%), Query Frame = 3 Query: 75 CAYAGTGNVLKVLNLLGHCAQHHEKGE-----------------------AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTHSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSVPXXXXXXXXCCWASRSAQDITGFQ 812 CAYAG+GNVLKV LL C++H + E A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++DTLS+ SHD EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQGL H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQPRML+T DE L+PL V + + ITGFQ Sbjct: 598 CAYAGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQ 866
BLAST of EY659967 vs. ExPASy Swiss-Prot
Match: PSMD2_MOUSE (26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus GN=Psmd2 PE=1 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 9.406e-72 Identity = 139/269 (51.67%), Postives = 183/269 (68.03%), Query Frame = 3 Query: 75 CAYAGTGNVLKVLNLLGHCAQHHEKGE-----------------------AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTHSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSVPXXXXXXXXCCWASRSAQDITGFQ 812 CAYAG+GNVLKV LL C++H + E A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++DTLS+ SHD EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQGL H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQPRML+T DE L+PL V + + ITGFQ Sbjct: 598 CAYAGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQ 866
BLAST of EY659967 vs. ExPASy Swiss-Prot
Match: PSMD2_HUMAN (26S proteasome non-ATPase regulatory subunit 2 OS=Homo sapiens GN=PSMD2 PE=1 SV=3) HSP 1 Score: 270.396 bits (690), Expect = 9.406e-72 Identity = 139/269 (51.67%), Postives = 183/269 (68.03%), Query Frame = 3 Query: 75 CAYAGTGNVLKVLNLLGHCAQHHEKGE-----------------------AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTHSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSVPXXXXXXXXCCWASRSAQDITGFQ 812 CAYAG+GNVLKV LL C++H + E A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++DTLS+ SHD EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQGL H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQPRML+T DE L+PL V + + ITGFQ Sbjct: 598 CAYAGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQ 866
BLAST of EY659967 vs. ExPASy Swiss-Prot
Match: PSMD2_BOVIN (26S proteasome non-ATPase regulatory subunit 2 OS=Bos taurus GN=PSMD2 PE=1 SV=2) HSP 1 Score: 270.396 bits (690), Expect = 9.406e-72 Identity = 139/269 (51.67%), Postives = 183/269 (68.03%), Query Frame = 3 Query: 75 CAYAGTGNVLKVLNLLGHCAQHHEKGE-----------------------AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTHSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSVPXXXXXXXXCCWASRSAQDITGFQ 812 CAYAG+GNVLKV LL C++H + E A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++DTLS+ SHD EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQGL H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQPRML+T DE L+PL V + + ITGFQ Sbjct: 598 CAYAGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQ 866
BLAST of EY659967 vs. ExPASy Swiss-Prot
Match: PSMD2_DICDI (26S proteasome non-ATPase regulatory subunit 2 OS=Dictyostelium discoideum GN=psmD2 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.832e-68 Identity = 133/247 (53.85%), Postives = 176/247 (71.26%), Query Frame = 3 Query: 72 SCAYAGTGNVLKVLNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTHSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSVPXXXXXXXXCCWASRSAQDITGFQ 812 +CAYAGTGNVLKV N+L C+ E + G AVL IA++AM EELG +M +R +HLLQ G +I+RA+PLALGLL SNP++ +MD LS+LSHD EVA A++SLGLIG+GTNNARI GMLR L+ +Y KD +L F VRIAQGL+H+GKG +T+NPYHSDR L+SP A+ G++ L A LD+K ++ + HY+ + +V +M PRML+T+DE+LKPL V + + ITGFQ Sbjct: 599 ACAYAGTGNVLKVQNMLHFCSDGQEN--PHHGLAVLSIALIAMGEELGSDMCLRMFDHLLQKGNVHIKRAIPLALGLLSPSNPRIAIMDILSKLSHDNDPEVAQGAILSLGLIGAGTNNARIGGMLRALAVFYGKDVHLFF-VRIAQGLLHLGKGTMTINPYHSDRTLMSPVAVGGLLALLHAGLDIKNILSTQSHYLFFSIVCSMYPRMLMTLDEDLKPLPVSVRVGQSVDIVGLAGKPKTITGFQ 842
BLAST of EY659967 vs. ExPASy Swiss-Prot
Match: RPN1_NEUCR (26S proteasome regulatory subunit rpn-1 OS=Neurospora crassa GN=rpn-1 PE=3 SV=2) HSP 1 Score: 256.529 bits (654), Expect = 1.406e-67 Identity = 131/252 (51.98%), Postives = 177/252 (70.24%), Query Frame = 3 Query: 75 CAYAGTGNVLKVLNLLGHCAQHHEKGEAYQGP------AVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTHSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSVPXXXXXXXXCCWASRSAQDITGFQ 812 CA+AGTG VLK+ LL C +H E GE +G AVLGI ++AM E++G EM +R HL+ YGE NIRRAVPLA+GL+ SNP++ V DTLSR SHD +EVA+ A+ ++GL+G+GTNNAR+A +LR L+SYY++D LF VRIAQGL+HMGKG L+++P+H+DR +LS A AG++ L A +D K I K HY+LY++V AM PRML+T+DE+LKPL+V + + ITG+Q Sbjct: 607 CAWAGTGAVLKIQELLHICNEHIEDGEEKKGEELLQAYAVLGIGLIAMGEDVGQEMVLRHFGHLMHYGEANIRRAVPLAMGLISPSNPQMKVYDTLSRYSHDNDNEVAINAIFAMGLLGAGTNNARLAQLLRQLASYYHRDQESLFMVRIAQGLLHMGKGTLSVSPFHTDRQVLSNVATAGLLAVLVAMIDAKQFITSKSHYLLYWIVTAMHPRMLVTLDEDLKPLTVNVRVGQAVDVVGQAGRPKTITGWQ 858
BLAST of EY659967 vs. ExPASy Swiss-Prot
Match: RPN1_SCHPO (26S proteasome regulatory subunit rpn1 OS=Schizosaccharomyces pombe GN=rpn1 PE=1 SV=2) HSP 1 Score: 229.95 bits (585), Expect = 8.043e-64 Identity = 111/227 (48.90%), Postives = 163/227 (71.81%), Query Frame = 3 Query: 75 CAYAGTGNVLKVLNLLGHCAQH-----HEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTHSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSV 740 C+YAGTGNVL + LL C++ E Q A LG+A +AM E++G EM +R +H++ YGE +IR+A+PLALGLL SNP++ + DTLSR SHD +VA A+ ++GL+G+GT+NAR+A +LR L+SYY+K++N LF VRIAQGL+++GKG +TLNPYH++R +L TA AG++T + A LD ++ H++LY + LA++PRML+T+ E+ + L V Sbjct: 597 CSYAGTGNVLHIQKLLHICSEPPSDDAKESETTIQTFAALGVATIAMGEDIGAEMVLRHFDHMMHYGEPSIRKAIPLALGLLSASNPQMRIFDTLSRYSHDNDLDVAYNAIFAMGLVGAGTSNARLAQLLRQLASYYHKESNALFMVRIAQGLLYLGKGTMTLNPYHTERQILGQTAFAGLMTVVLAMLDANTFVLDTSHWLLYAITLAIRPRMLITLGEDGQYLPV 823 HSP 2 Score: 36.1946 bits (82), Expect = 8.043e-64 Identity = 21/30 (70.00%), Postives = 21/30 (70.00%), Query Frame = 1 Query: 748 RVGQAVDVVGPAGRPKTSLGSRT-LNPVLL 834 RVGQAVDVVG AGRPK G T PVLL Sbjct: 826 RVGQAVDVVGQAGRPKVITGWVTHTTPVLL 855
BLAST of EY659967 vs. ExPASy Swiss-Prot
Match: RPN1_YEAST (26S proteasome regulatory subunit RPN1 OS=Saccharomyces cerevisiae GN=RPN1 PE=1 SV=3) HSP 1 Score: 171.014 bits (432), Expect = 7.379e-46 Identity = 80/190 (42.11%), Postives = 135/190 (71.05%), Query Frame = 3 Query: 171 AVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTHSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSV 740 AVLGIA++A+ E++G EM++R HL+ YG ++IRR VPLA+G++ +S+P++ V DTL+R SHD EV+M ++ ++GL G+GTNNAR+A +LR L+SYY ++ + LF R+AQGL+H+GKG +T++ + +D +L+ LA I+TT + ++ K+H + Y L ++P+ +L +++ +P+ V Sbjct: 739 AVLGIALIALGEDIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGIVSVSDPQMKVFDTLTRFSHDADLEVSMNSIFAMGLCGAGTNNARLAQLLRQLASYYSREQDALFITRLAQGLLHLGKGTMTMDVF-NDAHVLNKVTLASILTTAVGLVSPSFML--KHHQLFYMLNAGIRPKFILALNDEGEPIKV 925 HSP 2 Score: 35.039 bits (79), Expect = 7.379e-46 Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = 1 Query: 748 RVGQAVDVVGPAGRPKTSLGSRTLN-PVLLAAGDK 849 RVGQAV+ VG AGRPK G T + PVLL G++ Sbjct: 928 RVGQAVETVGQAGRPKKITGWITQSTPVLLNHGER 962
BLAST of EY659967 vs. ExPASy Swiss-Prot
Match: RPN1_CANGA (26S proteasome regulatory subunit RPN1 OS=Candida glabrata GN=RPN1 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.129e-45 Identity = 79/190 (41.58%), Postives = 133/190 (70.00%), Query Frame = 3 Query: 171 AVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTHSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSV 740 AV+GIA++ M EE+G EM++R HL+ YG ++IRR VPLA+GL+ +++P++ V DTL+R SHD +V+M ++ ++GL G GTNNAR+A +LR L+SYY ++ + LF R+AQGLVH+GKG +T++ + +D +L+ LA ++T L + ++ K+H + Y L ++P+ ++T++E + + V Sbjct: 729 AVIGIALITMGEEIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGLVSVADPQMKVFDTLTRFSHDPDLDVSMNSIFAMGLCGVGTNNARLAQLLRQLASYYSREQDALFITRLAQGLVHLGKGTMTMDIF-NDAHVLNKVTLASLLTVLVGLISPSFIL--KHHQLFYMLNSGVRPKFIITLNEEGEQIKV 915 HSP 2 Score: 36.5798 bits (83), Expect = 2.129e-45 Identity = 19/35 (54.29%), Postives = 25/35 (71.43%), Query Frame = 1 Query: 748 RVGQAVDVVGPAGRPKTSLGSRTLN-PVLLAAGDK 849 R+GQAV+ VG AG+PKT G T + PVLL G++ Sbjct: 918 RIGQAVETVGQAGKPKTITGWITQSTPVLLGHGER 952 The following BLAST results are available for this feature:
BLAST of EY659967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659967 ID=EY659967; Name=EY659967; organism=Citrus sinensis; type=EST; length=872bpback to top |