EY659857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659857 vs. ExPASy Swiss-Prot
Match: CPRF1_PETCR (Common plant regulatory factor 1 OS=Petroselinum crispum GN=CPRF1 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 7.872e-48 Identity = 105/229 (45.85%), Postives = 138/229 (60.26%), Query Frame = 3 Query: 51 KTSSPPPS---DEGYFHMYTDWAAMQAYYGPQVAIPPYHNSPIASGHAPQPYMWGPAHPMMPPYGTPYAAIYSTGGAHAHPAVPLGSHAHDHGVPTSTAAVTPLNTEAPTKTSGNADQGSAKKLKGLDGL*MSIGNASAESAEGGPQQMASQS-EAHRSTDGSDGNTLKAGQSRDKRTRQGTPIAGGHVNTDIQTTPVTADVNATADKVLPTDDAPTSVSGKPDGAVLS 725 K SSPPP D+ H+Y DWAAMQAYYGP+VA+PPY N +ASG +P PYMWGP P+MPPYG PYAA+Y+ GG +AHP VPL A +P++ + K+SG + G KKLKG D L MSIGN A+S+EG ++ SQS E S+DGS+ N+ +A + KR R P G V + Q++ V A ++K+L A V+GK G V+S Sbjct: 14 KLSSPPPPAAPDQSNSHVYPDWAAMQAYYGPRVALPPYFNPAVASGQSPHPYMWGPPQPVMPPYGVPYAALYAHGGVYAHPGVPL--------------AASPMSMDTHAKSSGTNEHGLIKKLKGHDDLAMSIGNGKADSSEGEMERTLSQSKETEGSSDGSNENSKRAAVNGRKRGRDEAPNMIGEVKIETQSS-VIPSPRAKSEKLLGITVATPMVAGKVVGTVVS 227
BLAST of EY659857 vs. ExPASy Swiss-Prot
Match: GBF3_ARATH (G-box-binding factor 3 OS=Arabidopsis thaliana GN=GBF3 PE=1 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 2.991e-47 Identity = 95/182 (52.20%), Postives = 119/182 (65.38%), Query Frame = 3 Query: 60 SPPPSDEGYFHMYTDWAAMQAYYGPQVAIPPYHNSPIA-SGHAPQPYMWGPAHPMMPPYGTPYAAIY-STGGAHAHPAVPLGSHAHDHGVPTSTAAVTPLNTEAPTKTSGNADQGSAKKLKGLDGL*MSIGNASAESAEGGPQQMASQSEAHRSTDGSDGNTLKAGQSRDKRTRQGTPIAGG 599 S PP D+ H+Y DWAAMQAYYGP+VA+PPY+NS +A SGH P PYMW P H MM PYG PYAA+Y GG +AHP +P+GS P T T L+ + PTK++GN D G KKLK DGL MS+GN + E+ ++ + SE STDGSDGNT A + + KR+R+GTP G Sbjct: 18 SSPPVDQTNVHVYPDWAAMQAYYGPRVAMPPYYNSAMAASGHPPPPYMWNPQH-MMSPYGAPYAAVYPHGGGVYAHPGIPMGSLPQGQKDPPLTTPGTLLSIDTPTKSTGNTDNGLMKKLKEFDGLAMSLGNGNPENGADEHKRSRNSSETDGSTDGSDGNTTGADEPKLKRSREGTPTKDG 198
BLAST of EY659857 vs. ExPASy Swiss-Prot
Match: GBF2_ARATH (G-box-binding factor 2 OS=Arabidopsis thaliana GN=GBF2 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.184e-41 Identity = 93/219 (42.47%), Postives = 122/219 (55.71%), Query Frame = 3 Query: 51 KTSSPPPSDEGYFHMYT-DWAAMQAYYGPQVAIPPYHNSPIASGHAPQPYMWGPAHPMMPPYGTPYAAIYSTGGAHAHPAVPLGSHAHDHGVPTSTAAVTPLNTEAPTKTSGNADQGSAKKLKGLDGL*MSIGNASAESAE--GGPQQMASQSEAHRSTDGSDGNTLKAGQSRDKRTRQGTPIAGGHVNTDIQTTPVTADVNATADKVLPTDDAPTSVS 698 K S ++ H+Y DWAAMQAYYGP+V IP Y+NS +A GHAP PYMW PMM PYG PY GG +AHP V +GS +++ TPL +AP ++GN+D G KKLK DGL MSI N SAE + + SE S++GSDGNT QSR KR +Q +P G ++ + P+ + N D + T PT++S Sbjct: 15 KPSQAAAPEQSNVHVYHHDWAAMQAYYGPRVGIPQYYNSNLAPGHAPPPYMWASPSPMMAPYGAPYPPFCPPGGVYAHPGVQMGSQPQGPVSQSASGVTTPLTIDAPANSAGNSDHGFMKKLKEFDGLAMSISNNKVGSAEHSSSEHRSSQSSENDGSSNGSDGNTTGGEQSRRKRRQQRSPSTGERPSSQ-NSLPLRGE-NEKPDVTMGTPVMPTAMS 231
BLAST of EY659857 vs. ExPASy Swiss-Prot
Match: TAF1_TOBAC (Transcriptional activator TAF-1 (Fragment) OS=Nicotiana tabacum GN=TAF1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.566e-16 Identity = 58/160 (36.25%), Postives = 81/160 (50.62%), Query Frame = 3 Query: 264 GGAHAHPAVPLGSHAHDHGVPTSTAAV-----TPLNTEAPTKTSGNADQGSAKKLKGLDGL*MSIGNASAESAEGGPQQMASQS-EAHRSTDGSDGNTLKAGQSRDKRTRQGTPIAGGHVNTDIQTTPVTADVNATADKVLPTDDAPTSVSGKPDGAVLS 725 GG +AHP VP+GSH HG+ TS A L+ +A K+S N+D+G L MS+GN SA++ EGG SQS + STDGSD N + KR+R+ TP G + ++ T ++N ++K + P V K G VLS Sbjct: 3 GGVYAHPGVPIGSHPPGHGMATSPAVSQAMDGASLSLDASAKSSENSDRGL---------LAMSLGNGSADNIEGGADHGNSQSGDTEDSTDGSDTNGAGVSERSKKRSRETTPDNSGDSKSHLRRCQPTGEINDDSEKAI-VAVRPGKVGEKVMGTVLS 152
BLAST of EY659857 vs. ExPASy Swiss-Prot
Match: GBF1_ARATH (G-box-binding factor 1 OS=Arabidopsis thaliana GN=GBF1 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.658e-16 Identity = 64/196 (32.65%), Postives = 86/196 (43.88%), Query Frame = 3 Query: 96 YTDWA-AMQAYYGPQVAIPPYHNSPIASGHAPQPYMWGPAHPMMPPYGT--PYAAIYSTGGAHAHPAVPLGSHAHDHGVPTSTAAVTPLNTEAPTKTSGNADQGSAKKLKGLDGL*MSIGNASAESAEGGPQQM-------ASQSEAHRSTDGSDGNTLKAGQSRDKRTRQGTPIAGGHVNTDIQTTPVTADVNAT 653 Y DW +MQAYYG P+ SP+ S +P PYMWG H MMPPYGT PY A+Y G +AHP++P+ P N+ PT DQ S KK KG S + AEGG + + AS S+ + SD N A Q R+ + G + D + T ++ + Sbjct: 27 YPDWQNSMQAYYGGGGTPNPFFPSPVGSP-SPHPYMWGAQHHMMPPYGTPVPYPAMYPPGAVYAHPSMPM-----------------PPNS-GPTNKEPAKDQASGKKSKG----------NSKKKAEGGDKALSGSGNDGASHSDESVTAGSSDENDENANQQEQGSIRKP---SFGQMLADASSQSTTGEIQGS 190 The following BLAST results are available for this feature:
BLAST of EY659857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659857 ID=EY659857; Name=EY659857; organism=Citrus sinensis; type=EST; length=781bpback to top |