EY659795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AX_CICAR (Histone H2AX OS=Cicer arietinum GN=HIS2A PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.695e-52 Identity = 106/126 (84.13%), Postives = 107/126 (84.92%), Query Frame = 2 Query: 143 PKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQEF 520 PKASKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP GNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKG+IGSASQEF Sbjct: 14 PKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF 139
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AXB_ARATH (Probable histone H2AXb OS=Arabidopsis thaliana GN=At1g54690 PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.093e-49 Identity = 102/126 (80.95%), Postives = 103/126 (81.75%), Query Frame = 2 Query: 143 PKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQEF 520 PKA+KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP GNAARDNK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP KVGK KGDIGSASQEF Sbjct: 17 PKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKNKGDIGSASQEF 142
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AXA_ARATH (Probable histone H2AXa OS=Arabidopsis thaliana GN=At1g08880 PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 6.889e-49 Identity = 101/126 (80.16%), Postives = 103/126 (81.75%), Query Frame = 2 Query: 143 PKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQEF 520 PKA+KSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAP GNAARDNK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP KVGK KGDIGSASQEF Sbjct: 17 PKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKNKGDIGSASQEF 142
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AX_PICAB (Histone H2AX OS=Picea abies PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 2.895e-47 Identity = 98/125 (78.40%), Postives = 102/125 (81.60%), Query Frame = 2 Query: 146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQEF 520 K++KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP GNAARDNK NRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLPKK GK KG+IGSASQEF Sbjct: 14 KSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLPKKSGKDKGEIGSASQEF 138
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AXB_ORYSJ (Probable histone H2AXb OS=Oryza sativa subsp. japonica GN=Os12g0530000 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 5.459e-46 Identity = 97/125 (77.60%), Postives = 100/125 (80.00%), Query Frame = 2 Query: 146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQEF 520 K SKSVSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAP GNAARDNK NRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNIHQTLLPKK GK K DIGSASQEF Sbjct: 14 KGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGGKDKADIGSASQEF 138
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AXB_ORYSI (Probable histone H2AXb OS=Oryza sativa subsp. indica GN=OsI_037312 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 5.459e-46 Identity = 97/125 (77.60%), Postives = 100/125 (80.00%), Query Frame = 2 Query: 146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQEF 520 K SKSVSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAP GNAARDNK NRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNIHQTLLPKK GK K DIGSASQEF Sbjct: 14 KGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGGKDKADIGSASQEF 138
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AXA_ORYSJ (Probable histone H2AXa OS=Oryza sativa subsp. japonica GN=Os03g0721900 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.942e-43 Identity = 94/125 (75.20%), Postives = 99/125 (79.20%), Query Frame = 2 Query: 146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQEF 520 K +K+VSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAP GNAARDNK NRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNI Q LLPKK G GKGDIGSASQEF Sbjct: 14 KTTKAVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPKK-GGGKGDIGSASQEF 137
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AXA_ORYSI (Probable histone H2AXa OS=Oryza sativa subsp. indica GN=OsI_012923 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.942e-43 Identity = 94/125 (75.20%), Postives = 99/125 (79.20%), Query Frame = 2 Query: 146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQEF 520 K +K+VSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAP GNAARDNK NRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNI Q LLPKK G GKGDIGSASQEF Sbjct: 14 KTTKAVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPKK-GGGKGDIGSASQEF 137
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A3_ARATH (Probable histone H2A.3 OS=Arabidopsis thaliana GN=At4g27230 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 4.949e-39 Identity = 84/114 (73.68%), Postives = 85/114 (74.56%), Query Frame = 2 Query: 149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 490 A KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP GNAARDNK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K Sbjct: 13 AKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK 126
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A6_ARATH (Histone H2A.6 OS=Arabidopsis thaliana GN=RAT5 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.440e-38 Identity = 83/114 (72.81%), Postives = 85/114 (74.56%), Query Frame = 2 Query: 149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 490 A K+ SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP GNAARDNK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K Sbjct: 13 AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGASK 126 The following BLAST results are available for this feature:
BLAST of EY659795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659795 ID=EY659795; Name=EY659795; organism=Citrus sinensis; type=EST; length=572bpback to top |