EY659648
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659648 vs. ExPASy Swiss-Prot
Match: RNF5_CAEEL (RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.688e-24 Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = 1 Query: 433 TSRSAQNPYSNNNSNSEAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGISSTDPRSKSIP 705 T ++ P S++N + E+ FECNIC D A+D +V+LCGHLFCWPCL +WL N + CPVCK+ I+ K+VP+YGRG S+DPR K P Sbjct: 5 TKAPSEEPTSSSNKD-ESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIYGRGGDSSDPRKKVPP 94
BLAST of EY659648 vs. ExPASy Swiss-Prot
Match: RN185_RAT (RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.702e-24 Identity = 52/107 (48.60%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 415 SSFGESTSRSAQN-----PYSNNNSNSEAGN----FECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRG-ISSTDPRSKSIP 705 +S G S S S +N P ++N E+G FECNIC D A+D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG DPR K+ P Sbjct: 2 ASKGPSASASTENSSAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKTPP 108
BLAST of EY659648 vs. ExPASy Swiss-Prot
Match: RN185_MOUSE (RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.702e-24 Identity = 52/107 (48.60%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 415 SSFGESTSRSAQN-----PYSNNNSNSEAGN----FECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRG-ISSTDPRSKSIP 705 +S G S S S +N P ++N E+G FECNIC D A+D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG DPR K+ P Sbjct: 2 ASKGPSASASTENSNAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKTPP 108
BLAST of EY659648 vs. ExPASy Swiss-Prot
Match: RN185_PONAB (RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.161e-23 Identity = 52/107 (48.60%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 415 SSFGESTSRSAQN-----PYSNNNSNSEAGN----FECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRG-ISSTDPRSKSIP 705 +S G S S S +N P ++N E+G FECNIC D A+D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG DPR K+ P Sbjct: 2 ASKGPSASSSPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKTPP 108
BLAST of EY659648 vs. ExPASy Swiss-Prot
Match: RN185_HUMAN (RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.161e-23 Identity = 52/107 (48.60%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 415 SSFGESTSRSAQN-----PYSNNNSNSEAGN----FECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRG-ISSTDPRSKSIP 705 +S G S S S +N P ++N E+G FECNIC D A+D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG DPR K+ P Sbjct: 2 ASKGPSASASPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKTPP 108
BLAST of EY659648 vs. ExPASy Swiss-Prot
Match: RN185_CHICK (RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.687e-23 Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = 1 Query: 415 SSFGESTSRSAQNPYSNNNSNSEAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRG-ISSTDPRSKSIP 705 SS TS S+ + + +N+N + FECNIC D A+D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG DPR K+ P Sbjct: 14 SSSTGGTSGSSSSNGAGDNTNQD-NTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKTPP 110
BLAST of EY659648 vs. ExPASy Swiss-Prot
Match: RN185_DANRE (RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.289e-23 Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 1 Query: 412 ASSFGESTSRSAQNPYSNNNSNSEAGN-------FECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRG-ISSTDPRSKSIP 705 A+S S+S S+ +N S E+G FECNIC D ++D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG DPR K+ P Sbjct: 5 AASESSSSSSSSSAGAANGQSAGESGGGGAQDSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKTPP 110
BLAST of EY659648 vs. ExPASy Swiss-Prot
Match: RNF5_RAT (E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.688e-21 Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 463 NNNSNSEAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGISS-TDPRSKSIP 705 N + FECNIC + A++ +V++CGHL+CWPCL++WL + +ECPVCKA I EK+VPLYGRG DPR K+ P Sbjct: 15 NRERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGSQKPQDPRLKTPP 96
BLAST of EY659648 vs. ExPASy Swiss-Prot
Match: RNF5_MOUSE (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.688e-21 Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 463 NNNSNSEAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGISS-TDPRSKSIP 705 N + FECNIC + A++ +V++CGHL+CWPCL++WL + +ECPVCKA I EK+VPLYGRG DPR K+ P Sbjct: 15 NRERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGSQKPQDPRLKTPP 96
BLAST of EY659648 vs. ExPASy Swiss-Prot
Match: RNF5_HUMAN (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.004e-20 Identity = 45/86 (52.33%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 454 PYSNNNSNSEAG-NFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGISS-TDPRSKSIP 705 P N AG FECNIC + A++ +V++CGHL+CWPCL++WL +ECPVCKA I EK+VPLYGRG DPR K+ P Sbjct: 11 PEGPNRERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVPLYGRGSQKPQDPRLKTPP 96 The following BLAST results are available for this feature:
BLAST of EY659648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659648 ID=EY659648; Name=EY659648; organism=Citrus sinensis; type=EST; length=881bpback to top |