EY659619
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 389.037 bits (998), Expect = 1.950e-107 Identity = 191/237 (80.59%), Postives = 205/237 (86.50%), Query Frame = 2 Query: 83 ETARQILGARSAQFPTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 E ARQI+G+R +Q T RK SFVVRAASTPPVKQGA+R LWFASKQSLSYLDG LPGD+GFDPLGLSDPEGTGGFIEPKWLAYGEVINGR+AMLGA GAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWA PGSMG+QYFLG EK LGGSGDPAYPGGPLFNPLG KDEK M++ KL+ +KNGRLA + L+ +GP Sbjct: 17 EAARQIIGSRISQSVT---RKASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGP 250
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 2.467e-102 Identity = 184/238 (77.31%), Postives = 198/238 (83.19%), Query Frame = 2 Query: 83 ETARQILGARSAQFPTGSSRKGSFVVRAASTPPVKQGA-DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 E RQ ARS G SRKG +VRAA+TPPVKQG DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGEVINGR+AMLGAVGAIAPE LGK GLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWA PGSMG+QYFLG EK GGSG+PAYPGGP FNPLG KDEK +++ KL+ +KNGRLA + L+ +GP Sbjct: 17 EAVRQSFRARSLPSSVGCSRKG--LVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGP 252
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 3.281e-33 Identity = 85/214 (39.72%), Postives = 111/214 (51.87%), Query Frame = 2 Query: 119 QFPTGSS----RKGSF--VVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLA 739 +F TGSS R SF + +A T K A + W S YL GSL GD GFDPLGL+ DPE KW E++NGR+AMLG G + PE+ K G+I W+ AG Y+A TLFV+E L + E RR+QD NPGS+ + F++Y G+ YPGG +FNPL A ++ E + + NGRLA Sbjct: 21 RFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL------KWFVQAELVNGRWAMLGVAGMLLPEVFTKIGII---NVPEWYD------AGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI--FKQYSLPKGEVGYPGG-IFNPLNFAPTQEAKE----KELANGRLA 212 HSP 2 Score: 42.743 bits (99), Expect = 3.281e-33 Identity = 18/32 (56.25%), Postives = 25/32 (78.12%), Query Frame = 1 Query: 730 KIGMLAILGYLVQGLVTGVGPYQNPLDHLADP 825 ++ MLA LG++VQ VTG GP++N L HL+DP Sbjct: 210 RLAMLAFLGFVVQHNVTGKGPFENLLQHLSDP 241
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.325e-31 Identity = 81/206 (39.32%), Postives = 105/206 (50.97%), Query Frame = 2 Query: 125 PTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLA 739 P G S SF V A K+G W S YL GSLPGD GFDPLGL+ DPE +W E++NGR+AMLG G + PE+ G+I W+ AG Y+A TLFV+E L + E RR+QD NPGS+ + F++Y +G+ YPGG +FNPL A + E + + NGRLA Sbjct: 38 PVGCSPSASFKVEA------KKGE----WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENL------RWFVQAELVNGRWAMLGVAGMLLPEVFTSIGII---NVPKWY------AAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPI--FKQYSLPAGEVGYPGG-IFNPLNFAPTLEAKE----KEIANGRLA 211 HSP 2 Score: 41.2022 bits (95), Expect = 1.325e-31 Identity = 16/32 (50.00%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 730 KIGMLAILGYLVQGLVTGVGPYQNPLDHLADP 825 ++ MLA LG+++Q VTG GP+ N L H++DP Sbjct: 209 RLAMLAFLGFIIQHNVTGKGPFDNLLQHISDP 240
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.629e-31 Identity = 90/239 (37.66%), Postives = 120/239 (50.21%), Query Frame = 2 Query: 98 ILGARSAQFPTGSS-RKGSFVV----RAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKF-MEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 I+GA A F G R F+ R+ + V DRPLWF +LDGSLPGD+GFDPLGL SDPE KW A E+++ R+AMLGA G PE L K G++ +W+ AG Y+ D TLFV+E+ L+G+AE RR+ D PG + K G D YPGG F+PLG +++ + + +KNGRLA F+ + GP Sbjct: 26 IVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVL---NTPSWY------TAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTG--TDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 247
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.633e-29 Identity = 87/239 (36.40%), Postives = 120/239 (50.21%), Query Frame = 2 Query: 98 ILGARSAQFPTG-----SSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKF-MEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 I+G A F G S + R+A+T V DRPLWF +LDGSLPGD+GFDPLGL SDPE +W E+++ R+AMLGA G PE+L K G++ +W+ AG Y+ D TLF++E+ L+G+AE RR+ D PG + K G D YPGG F+PLG +++ + + +KNGRLA F+ + GP Sbjct: 26 IVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESL------RWNQQAELVHCRWAMLGAAGIFIPELLTKIGIL---NTPSWY------TAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTG--TDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 247
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 9.276e-26 Identity = 70/178 (39.33%), Postives = 93/178 (52.25%), Query Frame = 2 Query: 209 WFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLA 739 W QS +YLDGSL GD GFDPL L+ DPE + +W +V+NGR+AMLG G + PE+L KAGL+ A W + G Y+A T + M+ + E RR+QD NPGS+ + F+ Y + YP G +FNPL A E K + + NGRLA Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPE------DLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLM---NAPEWLRL-----PGKETYFASSSTALRVHMS-STYVEIRRWQDIKNPGSVNQDPI--FKSYSLPPHECGYP-GRVFNPLNFAPLEN-----KEKELANGRLA 190 HSP 2 Score: 40.0466 bits (92), Expect = 9.276e-26 Identity = 18/32 (56.25%), Postives = 23/32 (71.88%), Query Frame = 1 Query: 730 KIGMLAILGYLVQGLVTGVGPYQNPLDHLADP 825 ++ MLA LG+LVQ V G GP++N HLADP Sbjct: 188 RLAMLAFLGFLVQHNVHGKGPFENLQQHLADP 219
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.305e-22 Identity = 71/175 (40.57%), Postives = 93/175 (53.14%), Query Frame = 2 Query: 236 YLDGSLPGDYGFDPLGLSD-PEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAG-TYNYWAD--PYTL---FVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLA 739 YL+G + GDYG+DP GL PE K+ A+ E+I+ R+AMLGA G I PE L K G A+ WF+TG + G T NY+ P L V E+ L+G AE+ R + L FE D +PGGP F+PLGLAKD + K++ +KNGRLA Sbjct: 84 YLNGEVAGDYGYDPFGLGKKPENFA-----KYQAF-ELIHARWAMLGAAGFIIPEALNKYGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNG-----------LDFE-------DKLHPGGP-FDPLGLAKDPEQGALLKVKEIKNGRLA 232 HSP 2 Score: 38.5058 bits (88), Expect = 9.305e-22 Identity = 15/32 (46.88%), Postives = 22/32 (68.75%), Query Frame = 1 Query: 730 KIGMLAILGYLVQGLVTGVGPYQNPLDHLADP 825 ++ M A+LG+ +Q VTG GP +N HL+DP Sbjct: 230 RLAMFAMLGFFIQAYVTGEGPVENLAKHLSDP 261
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.363e-20 Identity = 78/213 (36.62%), Postives = 107/213 (50.23%), Query Frame = 2 Query: 191 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 GADRP + S+Q+ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G I PE+L K G+ Q WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 50 GADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCIFPELLSKNGV--QFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGP----------------LGEGLDPLYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.876e-20 Identity = 82/249 (32.93%), Postives = 121/249 (48.59%), Query Frame = 2 Query: 83 ETARQILGARSAQFPTGSSRKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 E +R++LG A+ + V ++A + + GADRP + S ++ SYL+G GDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PE+L K+G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + K++ +KNGRLA + + + ++ GP Sbjct: 23 ELSRKVLGNVEARVTMRRT-----VSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPET---FARNREL---EVIHARWAMLGALGCLTPELLAKSGVKFGEA--VWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVTDPIYPGGS-FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241 The following BLAST results are available for this feature:
BLAST of EY659619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659619 ID=EY659619; Name=EY659619; organism=Citrus sinensis; type=EST; length=910bpback to top |