EY675312
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 9.335e-34 Identity = 71/116 (61.21%), Postives = 84/116 (72.41%), Query Frame = 2 Query: 5 RPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 R AML AL CVFP I S+ G+ +A WFKAG+ IFS+ GL YLGNP I A +ILAIWAC+ LMGFVE Y +GGG G+ L P+YPGGA+DP AD+PD FAELK E+ NGR Sbjct: 103 RWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGR 218 HSP 2 Score: 23.8682 bits (50), Expect = 9.335e-34 Identity = 13/33 (39.39%), Postives = 18/33 (54.55%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKDTEA 452 LAM S+ GF V AI K P++ + + D A Sbjct: 219 LAMFSMFGFFVQAIVTGKGPIENLFDHLADPVA 251
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.729e-33 Identity = 68/116 (58.62%), Postives = 83/116 (71.55%), Query Frame = 2 Query: 5 RPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 R AML AL CVFP I S+ G+ +A WFKAG+ IFS+ GL YLGNP + A +ILAIWAC+ LMGFVE Y +GGG G+ L +YPGGA+DP AD+P+ FAELK E+ NGR Sbjct: 103 RWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGR 218 HSP 2 Score: 25.7942 bits (55), Expect = 7.729e-33 Identity = 14/33 (42.42%), Postives = 18/33 (54.55%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKDTEA 452 LAM S+ GF V AI K P++ + I D A Sbjct: 219 LAMFSMFGFFVQAIVTGKGPIENLSDHINDPVA 251
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.911e-32 Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 2 TRPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 +R AML AL C FP + + G+ +A WFKAG+ IF++ GL YLGNP I A +ILAIWA + LMGFVE Y +GGG G+ L PLYPGGA+DP AD+PD FAELK EL NGR Sbjct: 102 SRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGR 218 HSP 2 Score: 24.6386 bits (52), Expect = 4.911e-32 Identity = 13/33 (39.39%), Postives = 18/33 (54.55%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKDTEA 452 LAM S+ GF V AI K P++ + + D A Sbjct: 219 LAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVA 251
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 6.397e-32 Identity = 68/117 (58.12%), Postives = 83/117 (70.94%), Query Frame = 2 Query: 2 TRPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 +R AML AL CVFP + S+ G+ +A WFKAG+ IFS+ GL YLGNP I A +ILAIWAC+ LMG VE Y I GG G+ + PLYPGG++DP AD+P+ FAELK EL NGR Sbjct: 99 SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGR 215 HSP 2 Score: 25.7942 bits (55), Expect = 6.397e-32 Identity = 14/30 (46.67%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V AI K PL+ + I D Sbjct: 216 LAMFSMFGFFVQAIVTGKGPLENLADHIAD 245
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 8.330e-32 Identity = 69/117 (58.97%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 2 TRPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 +R AML AL CVFP I S+ G+ +A WFKAG IFS+ GL YLGNP + A +ILAIWA + LMGFVE Y +GGG G+ L +YPGGA+DP AD+PD FAELK EL NGR Sbjct: 100 SRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGR 216 HSP 2 Score: 24.2534 bits (51), Expect = 8.330e-32 Identity = 13/33 (39.39%), Postives = 18/33 (54.55%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKDTEA 452 LAM S+ GF V AI K P++ + + D A Sbjct: 217 LAMFSMFGFFVQAIVTGKGPIENLFDHVADPVA 249
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 8.330e-32 Identity = 69/117 (58.97%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 2 TRPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 +R AML AL CVFP I S+ G+ +A WFKAG IFS+ GL YLGNP + A +ILAIWA + LMGFVE Y +GGG G+ L +YPGGA+DP AD+PD FAELK EL NGR Sbjct: 100 SRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGR 216 HSP 2 Score: 24.2534 bits (51), Expect = 8.330e-32 Identity = 13/33 (39.39%), Postives = 18/33 (54.55%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKDTEA 452 LAM S+ GF V AI K P++ + + D A Sbjct: 217 LAMFSMFGFFVQAIVTGKGPIENLFDHVADPVA 249
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.085e-31 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 2 TRPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 +R AML AL C+FP + S+ G+ +A WFKAG IFS+ GL YLGNP + A +ILAIWA + LMG +E Y +GGG G+ L PLYPGGA+DP AD+P+ FAELK E+ NGR Sbjct: 101 SRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGR 217 HSP 2 Score: 25.409 bits (54), Expect = 1.085e-31 Identity = 14/33 (42.42%), Postives = 18/33 (54.55%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKDTEA 452 LAM S+ GF V AI K P++ + I D A Sbjct: 218 LAMFSMFGFFVQAIVTGKGPIENLADHIADPVA 250
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.412e-31 Identity = 65/116 (56.03%), Postives = 83/116 (71.55%), Query Frame = 2 Query: 5 RPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 R AML AL CVFP +F++ G+ +A WFKAG+ IFS+ GL YLGNP + A +ILAIWAC+ LMG VE Y + GG G+ + PLYPGG++DP AD+P+ FAELK E+ NGR Sbjct: 104 RWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGR 219 HSP 2 Score: 25.0238 bits (53), Expect = 1.412e-31 Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V AI K PL+ + + D Sbjct: 220 LAMFSMFGFFVQAIVTGKGPLENLADHLAD 249
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.416e-31 Identity = 68/116 (58.62%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 5 RPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 R AML AL CVFP I S+ G+ +A WFKAG+ IFS+ GL YLGNP I A +ILAIWA + LMGFVE Y +GGG G+ L +YPGGA+DP AD+P+ FAELK E+ NGR Sbjct: 75 RWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGR 190 HSP 2 Score: 25.409 bits (54), Expect = 1.416e-31 Identity = 14/33 (42.42%), Postives = 18/33 (54.55%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKDTEA 452 LAM S+ GF V AI K P++ + I D A Sbjct: 191 LAMFSMFGFFVQAIVTGKGPIENLSDHIADPVA 223
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.839e-31 Identity = 68/116 (58.62%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 5 RPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 R AML AL CVFP I S+ G+ +A WFKAG+ IFS+ GL YLGNP I A +ILAIWA + LMGFVE Y +GGG G+ L +YPGGA+DP AD+P+ FAELK E+ NGR Sbjct: 103 RWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGR 218 HSP 2 Score: 24.6386 bits (52), Expect = 1.839e-31 Identity = 13/33 (39.39%), Postives = 18/33 (54.55%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKDTEA 452 LAM S+ GF V AI K P++ + + D A Sbjct: 219 LAMFSMFGFFVQAIVTGKGPIENLYDHVADPVA 251 The following BLAST results are available for this feature:
BLAST of EY675312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675312 ID=EY675312; Name=EY675312; organism=Citrus sinensis; type=EST; length=1025bpback to top |