EY675209
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675209 vs. ExPASy Swiss-Prot
Match: ATX3H_ARATH (Ataxin-3 homolog OS=Arabidopsis thaliana GN=At3g54130 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 7.991e-71 Identity = 131/178 (73.60%), Postives = 148/178 (83.15%), Query Frame = 2 Query: 11 GDFSIHLLQKALEVWDLQVLPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKECPI-SSSDSSNGYGQWLSPEDAERITKSCNT----REGPKRIKLTQQHSDPFLSAEEADRLLEMEDEDLKAAIAASLL 529 GDFSI +LQKALEVWDLQV+PLNCP AEPAQIDPELE+AFICHLHDHWFCIRKVNGEWYNFDSL AAP+HLSKFYLSA+LDSLKG GWSIFIV+GNFP+ECP+ SSS++SN +GQWLSPEDAERI K+ ++ R + QQ + LS EE EMED+DLKAAIAASLL Sbjct: 80 GDFSIQVLQKALEVWDLQVIPLNCPDAEPAQIDPELESAFICHLHDHWFCIRKVNGEWYNFDSLLAAPQHLSKFYLSAFLDSLKGAGWSIFIVKGNFPQECPMSSSSEASNSFGQWLSPEDAERIRKNTSSGSSARNKRSNDNVNQQRRNQALSREEVQAFSEMEDDDLKAAIAASLL 257
BLAST of EY675209 vs. ExPASy Swiss-Prot
Match: ATX3_ORYSJ (Putative ataxin-3 homolog OS=Oryza sativa subsp. japonica GN=Os01g0851400 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 1.082e-59 Identity = 112/180 (62.22%), Postives = 137/180 (76.11%), Query Frame = 2 Query: 11 GDFSIHLLQKALEVWDLQVLPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKECPISSSDSSNGYGQWLSPEDAERITKSCNTREGPKRIKLTQQHSDPFLSAEEADRLLEM-------EDEDLKAAIAASLL 529 GDFSI +LQKALEVWDLQV+PL+ P DPELE AFICHL DHWFCIRKVNGEWYNF+SLY APEHLSKFYLSA++D+LKG GWSIF VRGNFPKECP+ +++ SNG+GQWL+P+DA RIT SCN +++ Q + L A++++ + EM E+ DL AAIAASL+ Sbjct: 86 GDFSIQVLQKALEVWDLQVIPLDSPDVGSCLFDPELETAFICHLQDHWFCIRKVNGEWYNFNSLYPAPEHLSKFYLSAFIDTLKGSGWSIFAVRGNFPKECPM-ATEGSNGFGQWLTPDDARRITSSCN------QVQTPTQQAGVSLVADQSEEMSEMDMIAAQQEEADLNAAIAASLM 258
BLAST of EY675209 vs. ExPASy Swiss-Prot
Match: ATX3_HUMAN (Ataxin-3 OS=Homo sapiens GN=ATXN3 PE=1 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 2.207e-20 Identity = 57/175 (32.57%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 8 SGDFSIHLLQKALEVWDLQVLPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKECPISSSDSSNGYGQWLSPEDAERITKSCNTREGPKRIKLTQQHS---DPFLSAEEADRLLEMEDEDLKAAIAAS 523 SG FSI ++ AL+VW L+++ N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ G+SIF+V+G+ P +C Q L +++ + E ++K + H + L A + +L+ ++EDL+ A+A S Sbjct: 72 SGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLP-DCEAD---------QLLQMIRVQQMHRPKLIGEELAQLKEQRVHKTDLERVLEANDGSGMLDEDEEDLQRALALS 236
BLAST of EY675209 vs. ExPASy Swiss-Prot
Match: ATX3_CHICK (Ataxin-3 OS=Gallus gallus GN=ATXN3 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 8.385e-20 Identity = 55/191 (28.80%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 8 SGDFSIHLLQKALEVWDLQVLPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFP----------------KECPISSSDSSNGYGQWLSPEDAERITKSCNTREGPKRIKLTQQHSDPFLSAEEADRLLEMEDEDLKAAIAASLLG 532 SG FSI ++ AL+VW L+++ N P + IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ G+SIF+V+G+ P + + +++ Q L D ++ + + +G + +++ L+ + +E E+ DL+ AI S+ G Sbjct: 72 SGFFSIQVISNALKVWGLELILFNSPEYQRLGIDPINEKSFICNYKEHWFTVRKLGKQWFNLNSLLMGPELISDTYLALFLAQLQQEGYSIFVVKGDLPDCEADQLLQMIRVQQVQRPKLIGEETAQSRDQRLPRSDVDQAIEVSHPFDGTGMLDEDEENFQRALALSRQEIDMEDEEADLRRAIQLSMQG 262
BLAST of EY675209 vs. ExPASy Swiss-Prot
Match: ATX3_RAT (Ataxin-3 OS=Rattus norvegicus GN=Atxn3 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.440e-19 Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 2 Query: 8 SGDFSIHLLQKALEVWDLQVLPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKECPISSSDSSNGYGQWLSPE-----------------DAERITKSCNTREGPKRIKLTQQHSDPFLSAEEADRLLEMEDEDLKAAIAASLLG 532 SG FSI ++ AL+VW L+++ N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ G+SIF+V+G+ P +C Q P+ D ER+ ++ +GP + L+ + +E E+ DL+ AI S+ G Sbjct: 72 SGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLP-DCEADQLLQMIKVQQMHRPKLIGEELAHLKEQSALKADLERVLEAA---DGPGMFDDDEDDLQRALAMSRQEIDMEDEEADLRRAIQLSMQG 259
BLAST of EY675209 vs. ExPASy Swiss-Prot
Match: ATX3_MOUSE (Ataxin-3 OS=Mus musculus GN=Atxn3 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 4.161e-19 Identity = 53/172 (30.81%), Postives = 92/172 (53.49%), Query Frame = 2 Query: 8 SGDFSIHLLQKALEVWDLQVLPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKECPISSSDSSNGYGQWLSPEDAERITKSCNTREGPKRIKLTQQHSDPFLSAEEADRLLEMEDEDLKAAIAAS 523 SG FSI ++ AL+VW L+++ N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ G+SIF+V+G+ P +C ++ Q + + R K + + L A + + + +++DL+ A+A S Sbjct: 72 SGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLP-DC------EADQLLQMIKVQQMHRPKLIGEELAHLKEQSALKADLERVLEAADGSGIFDEDEDDLQRALAIS 236
BLAST of EY675209 vs. ExPASy Swiss-Prot
Match: ATX3L_HUMAN (Putative ataxin-3-like protein OS=Homo sapiens GN=ATXN3L PE=5 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.748e-17 Identity = 58/187 (31.02%), Postives = 91/187 (48.66%), Query Frame = 2 Query: 8 SGDFSIHLLQKALEVWDLQVLPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKEC---------PISSSDSSNGYGQWLSPEDAERITKSC--NTREGPKRIKLTQQHSDPFLSAEEADRL-LEMEDEDLKAAIAASLLG 532 +G FSI ++ AL+ W L+++ N P + IDP E +FIC+ HWF IRK W+N +SL A PE +S L+ +L L+ +S+F+V+G+ P +C + D+ G+ L + R+ K+ E + Q + F A E R EDE L++ I S+ G Sbjct: 72 TGFFSIQVISNALKFWGLEIIHFNNPEYQKLGIDPINERSFICNYKQHWFTIRKFGKHWFNLNSLLAGPELISDTCLANFLARLQQQAYSVFVVKGDLP-DCEADQLLQIISVEEMDTPKLNGKKLVKQKEHRVYKTVLEKVSEESDESGTSDQDEEDFQRALELSRQETNREDEHLRSTIELSMQG 257
BLAST of EY675209 vs. ExPASy Swiss-Prot
Match: ATX3_CAEEL (Ataxin-3 homolog OS=Caenorhabditis elegans GN=atx-3 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.385e-14 Identity = 37/100 (37.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 8 SGDFSIHLLQKALEVWDLQVLPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFPK 307 SG FSI +L+KALE + L++ + P + +P A+IC+L +HWF +RK +W+ +S+ P+ LS Y+S +L + G+SIF+V+G P+ Sbjct: 70 SGYFSIQVLEKALETFSLKLTNIENPAMVDYKNNPLTARAYICNLREHWFVLRKFGNQWFELNSVNRGPKLLSDTYVSMFLHQVSSEGYSIFVVQGVLPR 169
BLAST of EY675209 vs. ExPASy Swiss-Prot
Match: ATX3_CAEBR (Ataxin-3 homolog OS=Caenorhabditis briggsae GN=atx-3 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.602e-13 Identity = 33/99 (33.33%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 8 SGDFSIHLLQKALEVWDLQVLPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFP 304 SG FSI +++KALE +DL+++ + P + +P A++ +L +HWF +RK +W+ +S+ P+ L+ Y+ YL +SIF+V+G P Sbjct: 71 SGFFSIQVIEKALETFDLKLINMENPAMAEFKANPLTARAYVLNLREHWFVLRKFGNQWFELNSVKNGPKLLTDTYVKEYLHQFAAENYSIFVVQGILP 169 The following BLAST results are available for this feature:
BLAST of EY675209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY675209 ID=EY675209; Name=EY675209; organism=Citrus sinensis; type=EST; length=1047bpback to top |