EY675147
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.886e-56 Identity = 99/140 (70.71%), Postives = 119/140 (85.00%), Query Frame = 3 Query: 90 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS 509 N S+ DPEI+DL+ KEK+RQ G+ELIASENFTS AV+E++GS TNKY+EG+PG RYYGGNE +D++ENLC RAL+TF+L+P +WGVNVQPYSGS ANFAA+T +L+PHDRIMGLDLPSGGHLTHGY T KKIS Sbjct: 31 NRSVSESDPEIYDLMMKEKQRQFTGLELIASENFTSRAVMESIGSCFTNKYAEGLPGARYYGGNEVVDQLENLCIKRALETFNLNPEEWGVNVQPYSGSTANFAAFTGLLKPHDRIMGLDLPSGGHLTHGYQTD-KKKIS 169 HSP 2 Score: 30.4166 bits (67), Expect = 1.886e-56 Identity = 16/59 (27.12%), Postives = 30/59 (50.85%), Query Frame = 2 Query: 497 EKNIGRTSIYFESLPYKVEFQILGILITISWEEKRRWKFLGQKLIILRGGGGFPRDGEY 673 +K I TSI+FES+PY+V + + + L + +++ G +PR+ +Y Sbjct: 165 KKKISATSIFFESMPYQVNETGY-----VDYNKMEANAALFRPKLLIAGASAYPREWDY 218
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3) HSP 1 Score: 207.223 bits (526), Expect = 2.085e-56 Identity = 100/141 (70.92%), Postives = 113/141 (80.14%), Query Frame = 3 Query: 87 GNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS 509 G SL DPE+ +L+++EK RQCRG+ELIASENF S A +EALGS L NKYSEG PG RYYGG E +DEIE LC+ RAL+ F LDP QWGVNVQPYSGSPAN A YTA+L+PHDRIMGLDLP GGHLTHG Y S K+IS Sbjct: 45 GQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHG-YMSDVKRIS 184 HSP 2 Score: 28.1054 bits (61), Expect = 2.085e-56 Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 500 KNIGRTSIYFESLPYKV 550 K I TSI+FES+PYK+ Sbjct: 181 KRISATSIFFESMPYKL 197 HSP 3 Score: 24.6386 bits (52), Expect = 2.085e-56 Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 1 Query: 556 PNTGYIDYNKLGGKKALEIFRPKV 627 P TG IDYN+L +FRP++ Sbjct: 199 PKTGLIDYNQLA--LTARLFRPRL 220
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.207e-55 Identity = 101/141 (71.63%), Postives = 113/141 (80.14%), Query Frame = 3 Query: 87 GNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS 509 G SL DPE+ +L+ +EK RQCRG+ELIASENF S A +EALGS L NKYSEG PG RYYGG E +DEIE LC+ RAL+ F LDP QWGVNVQPYSGSPAN AAYTA+L+PHDRIMGLDLP GGHLTHG Y S K+IS Sbjct: 45 GQESLSDSDPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHG-YMSDVKRIS 184 HSP 2 Score: 28.4906 bits (62), Expect = 1.207e-55 Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 2 Query: 500 KNIGRTSIYFESLPYKVEFQ 559 K I TSI+FES+PYK+ Q Sbjct: 181 KRISATSIFFESMPYKLNPQ 200
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYM_RABIT (Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 2.051e-55 Identity = 104/168 (61.90%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 18 PFFSFSVNPENGKKEKM---DPVNEW-GNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS 509 P +V ++GK + + W G SL DPE+ +L+++EK RQCRG+ELIASENF A +EALGS L NKYSEG PG RYYGG E +DEIE LC+ RAL+ F LDP QWGVNVQPYSGSPAN AAYTA+L+PHDRIMGLDLP GGHLTHG Y S K++S Sbjct: 18 PLVRTAVRAQHGKAAQTQTGEASRGWTGQESLSDTDPEMWELLQREKDRQCRGLELIASENFCIRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHG-YMSDVKRVS 184 HSP 2 Score: 28.4906 bits (62), Expect = 2.051e-55 Identity = 19/58 (32.76%), Postives = 31/58 (53.45%), Query Frame = 2 Query: 500 KNIGRTSIYFESLPYKVEFQILGILITISWEEKRRWKFLGQKLIILRGGGGFPRDGEY 673 K + TSI+FES+PYK+ Q G+ I +E+ L + +I+ G + R +Y Sbjct: 181 KRVSATSIFFESMPYKLNPQ-TGL---IDYEQLALTARLFRPRLIIAGTSAYARLIDY 234
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYC_MOUSE (Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1 PE=1 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 1.086e-54 Identity = 97/137 (70.80%), Postives = 111/137 (81.02%), Query Frame = 3 Query: 99 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS 509 L+ D E++ +I+KE RQ G+ELIASENF S AV+EALGS+L NKYSEG PG RYYGG EFIDE+E LC+ RALQ +HLDP WGVNVQPYSGSPANFA YTA++EPH RIMGLDLP GGHLTHG+ T KKIS Sbjct: 20 LKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSSLNNKYSEGYPGQRYYGGTEFIDELEMLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTD-KKKIS 155 HSP 2 Score: 29.6462 bits (65), Expect = 1.086e-54 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 497 EKNIGRTSIYFESLPYKV 550 +K I TSI+FES+PYKV Sbjct: 151 KKKISATSIFFESMPYKV 168 HSP 3 Score: 23.8682 bits (50), Expect = 1.086e-54 Identity = 10/24 (41.67%), Postives = 17/24 (70.83%), Query Frame = 1 Query: 556 PNTGYIDYNKLGGKKALEIFRPKV 627 P TGYI+Y++L ++ +F PK+ Sbjct: 170 PETGYINYDQL--EENASLFHPKL 191
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYC_PONAB (Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.054e-54 Identity = 96/137 (70.07%), Postives = 110/137 (80.29%), Query Frame = 3 Query: 99 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS 509 L+ D E++++I+KE RQ G+EL ASENF S AV+EALGS L NKYSEG PG RYYGG EFIDE+E LC+ RALQ + LDP WGVNVQPYSGSPANFA YTA++EPH RIMGLDLP GGHLTHG+ T G KKIS Sbjct: 26 LKDSDVEVYNIIKKESNRQRVGLELFASENFASQAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMT-GKKKIS 161 HSP 2 Score: 29.6462 bits (65), Expect = 4.054e-54 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 497 EKNIGRTSIYFESLPYKV 550 +K I TSI+FES+PYKV Sbjct: 157 KKKISATSIFFESMPYKV 174 HSP 3 Score: 24.2534 bits (51), Expect = 4.054e-54 Identity = 10/24 (41.67%), Postives = 18/24 (75.00%), Query Frame = 1 Query: 556 PNTGYIDYNKLGGKKALEIFRPKV 627 P+TGYI+Y++L ++ +F PK+ Sbjct: 176 PDTGYINYDQL--EENARLFHPKL 197
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 8.395e-54 Identity = 100/159 (62.89%), Postives = 120/159 (75.47%), Query Frame = 3 Query: 42 PENGKKEKMDPVNEWG---NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS 509 P+ +K +P W NS LE +DPEI D+IE EK RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RYYGGNE+ID E LC+ RAL+ F LDP +WGVNVQP SGSP+NF YTA+L+PHDRIM LDLP GGHL+HGY T KKIS Sbjct: 34 PDEAVYDKENPRVTWPKQLNSPLEVIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTD-TKKIS 191 HSP 2 Score: 25.409 bits (54), Expect = 8.395e-54 Identity = 15/58 (25.86%), Postives = 31/58 (53.45%), Query Frame = 2 Query: 500 KNIGRTSIYFESLPYKVEFQILGILITISWEEKRRWKFLGQKLIILRGGGGFPRDGEY 673 K I SI+FE++PY+++ + G I +++ + L + +I+ G + R +Y Sbjct: 188 KKISAVSIFFETMPYRLD-ESTGY---IDYDQLEKSATLFRPKLIVAGASAYARLYDY 241
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 4.120e-53 Identity = 103/165 (62.42%), Postives = 120/165 (72.73%), Query Frame = 3 Query: 24 FSFSVNPENGKKEKMDPVNEWG---NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS 509 +S S P EK P W N+ LE VDPEI D+IE EK RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RYYGGNE+ID E LC+ RAL+ F LDP +WGVNVQP SGSPANF YTA+L+ HDRIM LDLP GGHL+HGY T KKIS Sbjct: 28 YSMSSLPSEAVYEKERPGVTWPKQLNAPLEVVDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKAHDRIMALDLPHGGHLSHGYQTD-TKKIS 191 HSP 2 Score: 24.6386 bits (52), Expect = 4.120e-53 Identity = 15/58 (25.86%), Postives = 30/58 (51.72%), Query Frame = 2 Query: 500 KNIGRTSIYFESLPYKVEFQILGILITISWEEKRRWKFLGQKLIILRGGGGFPRDGEY 673 K I SI+FE++PY++ + G I +++ + L + +I+ G + R +Y Sbjct: 188 KKISAVSIFFETMPYRLN-ESTGY---IDYDQLEKSATLFRPKLIVAGASAYARLYDY 241
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 9.126e-53 Identity = 96/140 (68.57%), Postives = 113/140 (80.71%), Query Frame = 3 Query: 90 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS 509 N+ LE VDPEI D+IE EK RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RYYGGNE+ID E LC+ RAL+ F LDP +WGVNVQP SGSPANF YTA+L+PH+RIM LDLP GGHL+HGY T KKIS Sbjct: 53 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTD-TKKIS 191 HSP 2 Score: 25.409 bits (54), Expect = 9.126e-53 Identity = 15/58 (25.86%), Postives = 31/58 (53.45%), Query Frame = 2 Query: 500 KNIGRTSIYFESLPYKVEFQILGILITISWEEKRRWKFLGQKLIILRGGGGFPRDGEY 673 K I SI+FE++PY+++ + G I +++ + L + +I+ G + R +Y Sbjct: 188 KKISAVSIFFETMPYRLD-ESTGY---IDYDQLEKSATLFRPKLIVAGASAYARLYDY 241
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 9.600e-53 Identity = 101/146 (69.18%), Postives = 118/146 (80.82%), Query Frame = 3 Query: 87 GNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISGELRF 524 GN+ L+ VD EI +L+ +EK RQ +G+ELIASENFTS AV+EALGS TNKY+EG PG+RYYGG E +DE+E LC+ RAL+ F LD ++WGVNVQPYSGSPANFA YTA+L PHDRIMGLDLPSGGHLTHGY T KKIS F Sbjct: 6 GNTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSRYYGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLDLPSGGHLTHGYQTD-KKKISASSIF 150 The following BLAST results are available for this feature:
BLAST of EY675147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675147 ID=EY675147; Name=EY675147; organism=Citrus sinensis; type=EST; length=1033bpback to top |