EY675125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675125 vs. ExPASy Swiss-Prot
Match: RAE2_MOUSE (Rab proteins geranylgeranyltransferase component A 2 OS=Mus musculus GN=Chml PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 2.074e-18 Identity = 59/165 (35.76%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 5 KLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENDVRISEEDLDSPFADFLTKMKLSHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGV 499 K+ VP SRA +F K L ++EK LM+F LD + +D ++ F+D+L KL+ ++ +L++IAM SE T DG+ + +GRF N I+P+YG GE+PQ FCR AV G +Y LR V L+ D++SG KG+ Sbjct: 271 KVEQVPCSRADVFNSKELSMVEKRMLMKFLTFC-----LDYEQHSDEY--QDFKQCSFSDYLKTKKLTPNLQHFILHSIAMT------SESSCTTLDGLQATKNFLQCLGRFGNT--PFIFPLYGHGEIPQCFCRMCAVFGGVYCLRHKVQCLVVDKDSGRCKGI 420
BLAST of EY675125 vs. ExPASy Swiss-Prot
Match: RAE1_MOUSE (Rab proteins geranylgeranyltransferase component A 1 OS=Mus musculus GN=Chm PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.673e-17 Identity = 56/161 (34.78%), Postives = 84/161 (52.17%), Query Frame = 2 Query: 17 VPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENDVRISEEDLDSPFADFLTKMKLSHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGV 499 VP SRA +F K L ++EK LM+F + E ++ + EE + F+++L KL+ ++ VL++IAM SE T DG+ + +GR+ N ++P+YGQGELPQ FCR AV G +Y LR V L+ D+ S K + Sbjct: 286 VPCSRADVFNSKQLTMVEKRMLMKFLTFCVEY----EDHPDEYKAYEE---TTFSEYLKTQKLTPNLQYFVLHSIAMT------SETTSSTVDGLKATKKFLQCLGRYGNT--PFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAI 431
BLAST of EY675125 vs. ExPASy Swiss-Prot
Match: RAE2_HUMAN (Rab proteins geranylgeranyltransferase component A 2 OS=Homo sapiens GN=CHML PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 1.138e-16 Identity = 56/165 (33.94%), Postives = 85/165 (51.52%), Query Frame = 2 Query: 5 KLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENDVRISEEDLDSPFADFLTKMKLSHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGV 499 K+ VP SRA +F K L ++EK LM+F + E ++ + + F+++L KL+ ++ VL++IAM SE T DG+N + +GRF N ++P+YGQGE+PQ FCR AV G +Y LR V + D+ SG K + Sbjct: 272 KVEQVPCSRADVFNSKELTMVEKRMLMKFLTFCLEY----EQHPDEYQAFRQ---CSFSEYLKTKKLTPNLQHFVLHSIAMT------SESSCTTIDGLNATKNFLQCLGRFGNT--PFLFPLYGQGEIPQGFCRMCAVFGGIYCLRHKVQCFVVDKESGRCKAI 421
BLAST of EY675125 vs. ExPASy Swiss-Prot
Match: RAE1_RAT (Rab proteins geranylgeranyltransferase component A 1 OS=Rattus norvegicus GN=Chm PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.536e-16 Identity = 57/161 (35.40%), Postives = 83/161 (51.55%), Query Frame = 2 Query: 17 VPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENDVRISEEDLDSPFADFLTKMKLSHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGV 499 VP SRA +F K L ++EK LM+F + E ++ R E + F+++L KL+ ++ VL++IAM SE T DG+ + +GR+ N ++P+YGQGELPQ FCR AV G +Y LR V L+ D+ S K V Sbjct: 271 VPCSRADVFNSKQLTMVEKRMLMKFLTFCVEY----EEHPDEYRAYE---GTTFSEYLKTQKLTPNLQYFVLHSIAMT------SETTSCTVDGLKATKKFLQCLGRYGNT--PFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAV 416
BLAST of EY675125 vs. ExPASy Swiss-Prot
Match: RAE1_HUMAN (Rab proteins geranylgeranyltransferase component A 1 OS=Homo sapiens GN=CHM PE=1 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 7.378e-16 Identity = 54/161 (33.54%), Postives = 81/161 (50.31%), Query Frame = 2 Query: 17 VPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENDVRISEEDLDSPFADFLTKMKLSHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGV 499 VP SRA +F K L ++EK LM+F + + + I+ F ++L KL+ ++ IV+++IAM SE T DG+ + +GR+ N ++P+YGQGELPQ FCR AV G +Y LR V L+ D+ S K + Sbjct: 274 VPCSRADVFNSKQLTMVEKRMLMKFLTFCMEYEKYPDEYKGYEEIT-------FYEYLKTQKLTPNLQYIVMHSIAMT------SETASSTIDGLKATKNFLHCLGRYGNT--PFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAI 419
BLAST of EY675125 vs. ExPASy Swiss-Prot
Match: RABEP_DROME (Rab proteins geranylgeranyltransferase component A OS=Drosophila melanogaster GN=Rep PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 9.635e-16 Identity = 58/186 (31.18%), Postives = 89/186 (47.85%), Query Frame = 2 Query: 5 KLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENDVRISEEDLDSPFADFLTKMKLSHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRIG--FQVKDILEPQSWVPKS 556 ++ SVP SR+ +F K+L ++EK LM+F D E+ S E F ++L +++ KI S V+ AIAM E G+ R + S+GR+ N ++P+YG GELPQ FCR AV G +Y L+ V + D NS + G + K+++ + P S Sbjct: 145 EIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACN-----DYGEDKCNEDSLEFRGRTFLEYLQAQRVTEKISSCVMQAIAMCGPSTSFEE-------GMQRTQRFLGSLGRYGNT--PFLFPMYGCGELPQCFCRLCAVYGGIYCLKRAVDDIALDSNSNEFLLSSAGKTLRAKNVVSAPGYTPVS 316
BLAST of EY675125 vs. ExPASy Swiss-Prot
Match: GDI1_SCHPO (Probable secretory pathway GDP dissociation inhibitor 1 OS=Schizosaccharomyces pombe GN=gdi1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.427e-13 Identity = 53/171 (30.99%), Postives = 84/171 (49.12%), Query Frame = 2 Query: 5 KLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENDVRISEEDLDSPFADFLTKMKLSHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRIGFQV 517 ++ VP + K + L EK + +F + V + D S D+ I + ++S F F L + + +A+A+ D + + +TR+ R+ LY SSI +F + IYP+YG GELPQ F R +A+ G Y+L PV ++ + G GVR G QV Sbjct: 114 RIAKVPGNEMEALKSPLMSLFEKRRAKKFLEWVNNYREDDPSTYKDINIDRDSMESVFKKF----GLQSGTQDFIGHAMALYLDDAYLKKPARETRE---RILLYASSIAKFGKS--PYIYPLYGLGELPQGFARLSAIYGGTYMLNQPVDEIVYG-DDGVAIGVRSGDQV 274
BLAST of EY675125 vs. ExPASy Swiss-Prot
Match: GDI1_YEAST (Rab GDP-dissociation inhibitor OS=Saccharomyces cerevisiae GN=GDI1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.789e-12 Identity = 42/166 (25.30%), Postives = 81/166 (48.80%), Query Frame = 2 Query: 5 KLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENDVRISEEDLDSPFADFLTKMKLSHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 502 K+ VP + +G+ EK ++ +F + + + D S + + + +D + F L + K + +A+A+ D + + R R+ LY S+ R+ + +YP+YG GELPQ F R +A+ G Y+L P+ +L +++G ++GV+ Sbjct: 123 KIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKF----GLGNSTKEFIGHAMALWTNDDYLQQ---PARPSFERILLYCQSVARYGKS--PYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVK 279
BLAST of EY675125 vs. ExPASy Swiss-Prot
Match: GDIA_BOVIN (Rab GDP dissociation inhibitor alpha OS=Bos taurus GN=GDI1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 8.441e-12 Identity = 52/187 (27.81%), Postives = 89/187 (47.59%), Query Frame = 2 Query: 5 KLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENDVRISE--EDLDSPFADFLTKMKLSHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRIGFQV---KDILEPQSWVP 550 K+ VP + +G+ EK + +F V +END + E + ++ D K L + +A+A+ D + + L+T INR+ LY+ S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + +G GV+ +V K ++ S+VP Sbjct: 115 KIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANF------DENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET---INRIKLYSESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVKSEGEVARCKQLICDPSYVP 288
BLAST of EY675125 vs. ExPASy Swiss-Prot
Match: GDIA_MOUSE (Rab GDP dissociation inhibitor alpha OS=Mus musculus GN=Gdi1 PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 1.102e-11 Identity = 51/187 (27.27%), Postives = 89/187 (47.59%), Query Frame = 2 Query: 5 KLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENDVRISE--EDLDSPFADFLTKMKLSHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRIGFQV---KDILEPQSWVP 550 K+ VP + +G+ EK + +F V +END + E + ++ D K L + +A+A+ D + + L+T INR+ LY+ S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + +G GV+ +V K ++ S++P Sbjct: 115 KIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANF------DENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET---INRIKLYSESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVKSEGEVARCKQLICDPSYIP 288 The following BLAST results are available for this feature:
BLAST of EY675125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675125 ID=EY675125; Name=EY675125; organism=Citrus sinensis; type=EST; length=1049bpback to top |