EY650051
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RK1_ARATH (50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana GN=RPL1 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 4.630e-69 Identity = 125/143 (87.41%), Postives = 137/143 (95.80%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKLPS 441 +VG DDLIEQIKGGFMEFDKLIASPDMMVKVA LGKILGPRGLMPNPKAGTVT NIPQAIEEFKKGKVE+RADKTGIVHIPFGK +F+E+DLLINFLAAVKS+E NKPKGAKGVYWKSA+ICSSMGPSI+LNI+EM+D+K P+ Sbjct: 202 IVGSDDLIEQIKGGFMEFDKLIASPDMMVKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKVNFTEEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKPPT 344
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RK1_SPIOL (50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea GN=RPL1 PE=1 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.105e-62 Identity = 114/144 (79.17%), Postives = 129/144 (89.58%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKLPSN 444 +VGG++LIEQIKGGFM+FDKLIA+ DMM KVASLG+ILGPRGLMP PKAGTVT N+ QA+EEFKKGKVE+R DKTGIVHIPFGK +F E+DLLIN A +KS+E NKP GAKGVYWKSA+I SSMGPSIRLNI+EMLDYK PSN Sbjct: 208 IVGGEELIEQIKGGFMDFDKLIATSDMMAKVASLGRILGPRGLMPTPKAGTVTPNVAQAVEEFKKGKVEFRVDKTGIVHIPFGKLNFEEEDLLINLFATIKSVETNKPTGAKGVYWKSAHISSSMGPSIRLNIREMLDYKPPSN 351
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RK1_RHDSA (50S ribosomal protein L1, chloroplastic OS=Rhodomonas salina GN=rpl1 PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.982e-47 Identity = 89/138 (64.49%), Postives = 111/138 (80.43%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 426 L G +DLI+ I G ++FD+LIA+PDMM +A LGK+LGPRGLMP+PK+GTVT +I +AI+EFKKGK+EYRADK+GIVHI FGK DFS +DLL N A +SI+ N+P G KG YWKS YICS+MGPSI+L+I E D Sbjct: 93 LAGAEDLIQNIMKGDLDFDRLIATPDMMPAIAKLGKVLGPRGLMPSPKSGTVTADIKEAIDEFKKGKLEYRADKSGIVHILFGKTDFSVEDLLANLEAVQESIDKNRPSGVKGRYWKSFYICSTMGPSIQLDISEFRD 230
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RK1_GUITH (50S ribosomal protein L1, chloroplastic OS=Guillardia theta GN=rpl1 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 8.497e-47 Identity = 87/138 (63.04%), Postives = 111/138 (80.43%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 426 L G DL++ I G ++FD+LIA+PDMM +A LGK+LGPRGLMP+PK+GTVT+++ AIEEFKKGK+EYRADK+GIVHI FGK +FS +DLL+N A +SI+ N+P G KG YWKS YICS+MGPSI+L+I E D Sbjct: 93 LAGSTDLVQDIMKGMLDFDRLIATPDMMPLIAKLGKVLGPRGLMPSPKSGTVTSDVKSAIEEFKKGKLEYRADKSGIVHISFGKTNFSVNDLLLNLEAVQESIDKNRPAGVKGKYWKSFYICSTMGPSIQLDISEFRD 230
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_THEEB (50S ribosomal protein L1 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplA PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.603e-45 Identity = 84/141 (59.57%), Postives = 117/141 (82.98%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 435 +VG ++LI++I+ G M+FD LIA+PDMM +VA +G+ILGPRGLMP+PKAGTVT ++PQAI+EFK GKVE+RAD++GIVH+ FGKA FS +DLL+N A +SI+ N+P GAKG YW+S Y+ ++MGPSI+++I + + KL Sbjct: 93 VVGSEELIDEIQKGRMDFDLLIATPDMMPQVAKVGRILGPRGLMPSPKAGTVTFDLPQAIQEFKAGKVEFRADRSGIVHVLFGKASFSAEDLLVNLKALQESIDRNRPSGAKGRYWRSVYVAATMGPSIQVDINALRELKL 233
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_ANASP (50S ribosomal protein L1 OS=Anabaena sp. (strain PCC 7120) GN=rplA PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.663e-45 Identity = 83/141 (58.87%), Postives = 115/141 (81.56%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 435 +VG ++LI++I+ G M+FDKLIA+PD+M +VA LGK+LGPRGLMP+PK GTVT ++ AI EFK GK+E+RAD+TGIVH+ FGKA FS +DLL+N A ++I+ N+P GAKG YW++ Y+ ++MGPSIR++I + DYKL Sbjct: 94 VVGSEELIDEIQKGRMDFDKLIATPDVMPQVAKLGKMLGPRGLMPSPKGGTVTFDVASAIAEFKAGKLEFRADRTGIVHVMFGKASFSPEDLLVNLKALQETIDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKL 234
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_SYNR3 (50S ribosomal protein L1 OS=Synechococcus sp. (strain RCC307) GN=rplA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.953e-45 Identity = 83/138 (60.14%), Postives = 108/138 (78.26%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 426 LVG ++L++ I GG M+FD LIA+PDMM KVA LG++LGPRGLMPNPK GTVTT++ AI EFK GK+E+RAD++GIVH+ FGKA FS DDLL N + ++++ NKP GAKG YWKS YI S+MGPS+ ++ + D Sbjct: 93 LVGDEELVDSIAGGQMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKTGTVTTDVTNAINEFKAGKLEFRADRSGIVHVQFGKASFSADDLLENLKSVQETVDRNKPSGAKGRYWKSLYITSTMGPSVEVDFSALQD 230
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_ANAVT (50S ribosomal protein L1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.357e-44 Identity = 83/139 (59.71%), Postives = 113/139 (81.29%), Query Frame = 1 Query: 19 GGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 435 G ++LI++I+ G M+FDKLIA+PD+M +VA LGK+LGPRGLMP+PK GTVT +I AI EFK GK+E+RAD+TGIVH+ FGKA FS +DLL+N A ++I+ N+P GAKG YW++ Y+ ++MGPSIR++I + DYKL Sbjct: 96 GSEELIDEIQKGRMDFDKLIATPDVMPQVAKLGKMLGPRGLMPSPKGGTVTFDIASAIAEFKAGKLEFRADRTGIVHVMFGKASFSPEDLLVNLKALQETIDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKL 234
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_MICAN (50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) GN=rplA PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.772e-44 Identity = 83/141 (58.87%), Postives = 112/141 (79.43%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 435 +VG ++LIE+I G M+F+ LIA+PDMM KVA LG+ LGPRGLMP+PK GTVTT++ AI EFK GK+E+RAD+TGIVH+ FGKA FS +DLL+N A ++++ N+P GAKG YW++ Y+ SSMGPSI+++I + D KL Sbjct: 94 IVGSEELIEEIAKGMMDFEVLIATPDMMPKVAKLGRQLGPRGLMPSPKGGTVTTDLTGAIAEFKAGKLEFRADRTGIVHVQFGKASFSAEDLLVNLKALQETVDRNRPSGAKGRYWRTVYVSSSMGPSIQVDISALRDLKL 234
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_SYNPW (50S ribosomal protein L1 OS=Synechococcus sp. (strain WH7803) GN=rplA PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.022e-44 Identity = 85/138 (61.59%), Postives = 107/138 (77.54%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 426 L G +DL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVTT++ AI EFK GK+E+RAD+TGIVH+ FGKA FSE +LL N ++I+ NKP GAKG YWKS Y+ S+MGPS+ ++I + D Sbjct: 93 LAGDEDLVETISKGEMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTTDLAAAINEFKAGKLEFRADRTGIVHVRFGKASFSEGNLLDNLKTLQETIDRNKPSGAKGRYWKSLYVTSTMGPSVEVDIAALQD 230 The following BLAST results are available for this feature:
BLAST of EY650051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650051 ID=EY650051; Name=EY650051; organism=Citrus sinensis; type=EST; length=762bpback to top |