EY649897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS23_ARATH (40S ribosomal protein S2-3 OS=Arabidopsis thaliana GN=RPS2C PE=1 SV=2) HSP 1 Score: 272.707 bits (696), Expect = 1.034e-87 Identity = 134/155 (86.45%), Postives = 143/155 (92.26%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +KWVPVTKLGRLV G I+ +EQIYLHSLP+KEYQIID LIG LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVR GYWGNKIG+PHTVPC VTGKCGSVTVRM APRG+GIVAARVP+K Sbjct: 52 EKWVPVTKLGRLVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKK 206 HSP 2 Score: 57.3806 bits (137), Expect = 1.034e-87 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KKVLQFAGIDDV TSSRGSTKTLGNFVKA Sbjct: 205 KKVLQFAGIDDVFTSSRGSTKTLGNFVKA 233 HSP 3 Score: 37.3502 bits (85), Expect = 1.034e-87 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFWR 779 + TF+CL KTY FLTP+FW+ Sbjct: 232 KATFDCLQKTYGFLTPEFWK 251
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS22_ARATH (40S ribosomal protein S2-2 OS=Arabidopsis thaliana GN=RPS2B PE=2 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 1.756e-87 Identity = 134/154 (87.01%), Postives = 142/154 (92.21%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 KWVPVTKLGRLV + KI LEQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVR GYWGNKIG+PHTVPC VTGKCGSVTVRM APRG+GIVAARVP+K Sbjct: 52 KWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKK 205 HSP 2 Score: 57.3806 bits (137), Expect = 1.756e-87 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KKVLQFAGIDDV TSSRGSTKTLGNFVKA Sbjct: 204 KKVLQFAGIDDVFTSSRGSTKTLGNFVKA 232 HSP 3 Score: 37.3502 bits (85), Expect = 1.756e-87 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFWR 779 + TF+CL KTY FLTP+FW+ Sbjct: 231 KATFDCLQKTYGFLTPEFWK 250
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS21_ARATH (40S ribosomal protein S2-1 OS=Arabidopsis thaliana GN=RPS2A PE=2 SV=2) HSP 1 Score: 271.937 bits (694), Expect = 1.756e-87 Identity = 134/154 (87.01%), Postives = 142/154 (92.21%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 KWVPVTKLGRLV + KI LEQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVR GYWGNKIG+PHTVPC VTGKCGSVTVRM APRG+GIVAARVP+K Sbjct: 52 KWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKK 205 HSP 2 Score: 57.3806 bits (137), Expect = 1.756e-87 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KKVLQFAGIDDV TSSRGSTKTLGNFVKA Sbjct: 204 KKVLQFAGIDDVFTSSRGSTKTLGNFVKA 232 HSP 3 Score: 37.3502 bits (85), Expect = 1.756e-87 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFWR 779 + TF+CL KTY FLTP+FW+ Sbjct: 231 KATFDCLQKTYGFLTPEFWK 250
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS2_DROME (40S ribosomal protein S2 OS=Drosophila melanogaster GN=sop PE=1 SV=2) HSP 1 Score: 260.766 bits (665), Expect = 2.728e-78 Identity = 124/154 (80.52%), Postives = 141/154 (91.56%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +WVPVTKLGRLVREGKI+ LE+IYL+SLPIKE++IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GH+GLGVKCSKEVATAIRGAIILAKLSV+PVR GYWGNKIG+PHTVPC VTGKCGSV+VR+ APRG GIV+A VP+K Sbjct: 42 EWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKK 195 HSP 2 Score: 42.3578 bits (98), Expect = 2.728e-78 Identity = 20/29 (68.97%), Postives = 23/29 (79.31%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+L AGI+D TS+RGST TLGNF KA Sbjct: 194 KKLLTMAGIEDCYTSARGSTGTLGNFAKA 222 HSP 3 Score: 32.7278 bits (73), Expect = 2.728e-78 Identity = 11/24 (45.83%), Postives = 17/24 (70.83%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFWRRLGL 791 + T+ + KTYA+LTPD W+ + L Sbjct: 221 KATYAAIAKTYAYLTPDLWKEMPL 244
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS2_ICTPU (40S ribosomal protein S2 OS=Ictalurus punctatus GN=rps2 PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 5.822e-75 Identity = 121/154 (78.57%), Postives = 138/154 (89.61%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +WVPVTKLGRLV++ KI+ LE+IYL+SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS+IPVR GYWGNKIG+PHTVPC VTG+CGSV VR+ APRG GIV+A VP+K Sbjct: 44 EWVPVTKLGRLVKDMKIKSLEEIYLYSLPIKESEIIDFFLGSALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKK 197 HSP 2 Score: 42.743 bits (99), Expect = 5.822e-75 Identity = 20/29 (68.97%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+L AGIDD TS+RG T TLGNF KA Sbjct: 196 KKLLMMAGIDDCYTSARGCTATLGNFAKA 224 HSP 3 Score: 31.5722 bits (70), Expect = 5.822e-75 Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFWR 779 + TF+ + KTY++LTPD W+ Sbjct: 223 KATFDAISKTYSYLTPDLWK 242
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS2_URECA (40S ribosomal protein S2 OS=Urechis caupo GN=RPS2 PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 7.583e-75 Identity = 122/154 (79.22%), Postives = 138/154 (89.61%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +WVPVTKLGRLV++ KI+ LE+IYL SLPIKE++IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVR GYWGNKIG+PHTVPC VTGKCGSV VR+ APRG GIV+A VP+K Sbjct: 45 EWVPVTKLGRLVKDMKIKTLEEIYLFSLPIKEFEIIDFFLGDALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPAPRGTGIVSAPVPKK 198 HSP 2 Score: 42.743 bits (99), Expect = 7.583e-75 Identity = 20/29 (68.97%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+L AGIDD TS+RG T TLGNF KA Sbjct: 197 KKLLAMAGIDDCYTSARGQTATLGNFAKA 225 HSP 3 Score: 28.8758 bits (63), Expect = 7.583e-75 Identity = 9/20 (45.00%), Postives = 14/20 (70.00%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFWR 779 + T+ + TY++LTPD WR Sbjct: 224 KATYAAIAATYSYLTPDLWR 243
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS2_RAT (40S ribosomal protein S2 OS=Rattus norvegicus GN=Rps2 PE=1 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 2.181e-74 Identity = 119/154 (77.27%), Postives = 137/154 (88.96%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +W+PVTKLGRLV++ KI+ LE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVR GYWGNKIG+PHTVPC VTG+CGSV VR+ APRG GIV+A VP+K Sbjct: 59 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKK 212 HSP 2 Score: 42.743 bits (99), Expect = 2.181e-74 Identity = 20/29 (68.97%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+L AGIDD TS+RG T TLGNF KA Sbjct: 211 KKLLMMAGIDDCYTSARGCTATLGNFAKA 239 HSP 3 Score: 31.5722 bits (70), Expect = 2.181e-74 Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFWR 779 + TF+ + KTY++LTPD W+ Sbjct: 238 KATFDAISKTYSYLTPDLWK 257
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS2_MOUSE (40S ribosomal protein S2 OS=Mus musculus GN=Rps2 PE=1 SV=3) HSP 1 Score: 248.44 bits (633), Expect = 2.181e-74 Identity = 119/154 (77.27%), Postives = 137/154 (88.96%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +W+PVTKLGRLV++ KI+ LE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVR GYWGNKIG+PHTVPC VTG+CGSV VR+ APRG GIV+A VP+K Sbjct: 59 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKK 212 HSP 2 Score: 42.743 bits (99), Expect = 2.181e-74 Identity = 20/29 (68.97%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+L AGIDD TS+RG T TLGNF KA Sbjct: 211 KKLLMMAGIDDCYTSARGCTATLGNFAKA 239 HSP 3 Score: 31.5722 bits (70), Expect = 2.181e-74 Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFWR 779 + TF+ + KTY++LTPD W+ Sbjct: 238 KATFDAISKTYSYLTPDLWK 257
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS2_HUMAN (40S ribosomal protein S2 OS=Homo sapiens GN=RPS2 PE=1 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 3.699e-74 Identity = 119/154 (77.27%), Postives = 137/154 (88.96%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +W+PVTKLGRLV++ KI+ LE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVR GYWGNKIG+PHTVPC VTG+CGSV VR+ APRG GIV+A VP+K Sbjct: 59 EWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKK 212 HSP 2 Score: 42.743 bits (99), Expect = 3.699e-74 Identity = 20/29 (68.97%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+L AGIDD TS+RG T TLGNF KA Sbjct: 211 KKLLMMAGIDDCYTSARGCTATLGNFAKA 239 HSP 3 Score: 31.5722 bits (70), Expect = 3.699e-74 Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFWR 779 + TF+ + KTY++LTPD W+ Sbjct: 238 KATFDAISKTYSYLTPDLWK 257
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS2_BOVIN (40S ribosomal protein S2 OS=Bos taurus GN=RPS2 PE=2 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 3.699e-74 Identity = 119/154 (77.27%), Postives = 137/154 (88.96%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +W+PVTKLGRLV++ KI+ LE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVR GYWGNKIG+PHTVPC VTG+CGSV VR+ APRG GIV+A VP+K Sbjct: 59 EWLPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKK 212 HSP 2 Score: 42.743 bits (99), Expect = 3.699e-74 Identity = 20/29 (68.97%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+L AGIDD TS+RG T TLGNF KA Sbjct: 211 KKLLMMAGIDDCYTSARGCTATLGNFAKA 239 HSP 3 Score: 31.5722 bits (70), Expect = 3.699e-74 Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFWR 779 + TF+ + KTY++LTPD W+ Sbjct: 238 KATFDAISKTYSYLTPDLWK 257 The following BLAST results are available for this feature:
BLAST of EY649897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649897 ID=EY649897; Name=EY649897; organism=Citrus sinensis; type=EST; length=940bpback to top |