DY306104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306104 vs. ExPASy Swiss-Prot
Match: RPG1_ARATH (Protein RUPTURED POLLEN GRAIN 1 OS=Arabidopsis thaliana GN=RPG1 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.319e-32 Identity = 72/202 (35.64%), Postives = 119/202 (58.91%), Query Frame = 1 Query: 1 PAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYG--IVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVC-DVVFPGTTVLVTQIFFDRD-VQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTK-DLFIGIPNGSGFIPGAAQLVLYVMYWKPKSSSKKIQ 591 PAKTFW I +++S EEF +PY++ ++N WV+YG +V +S+LV+++NG G +E+ YV ++L++ R +L + +V+ +L+T D V+ G + F++ Y +P A+ VV TKSVEYMPFLLS + F+N +WT Y+++ K D ++ NG G +QL++Y MY+K K ++ Sbjct: 26 PAKTFWRIFKKKSVEEFSYVPYVATVMNCMLWVFYGLPVVHKDSILVSTINGVGLVIELFYVGVYLMYCGHKKNHRRNILGFLALEVILVVAIILITLFALKGDFVKQTFVGVICDVFNIAMYGAPSLAIIKVVKTKSVEYMPFLLSLVCFVNAGIWTTYSLIFKIDYYVLASNGIGTFLALSQLIVYFMYYKSTPKEKTVK 227
BLAST of DY306104 vs. ExPASy Swiss-Prot
Match: R1AP1_DROPS (RAG1-activating protein 1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=slv PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.767e-17 Identity = 54/185 (29.19%), Postives = 93/185 (50.27%), Query Frame = 1 Query: 25 VQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIGIPNGSGFIPGAAQLVLYVMYWKPKSSS 579 +Q++ST + +P+I L+ FW+ YG++ +V VN G+ L +IY +I+ +F R A V V+ V ++ RD I+++G ++ +++PL+ + V+ K+ E +P L F+ W +Y +L D FI IPN G + QL L+V+Y P+S S Sbjct: 32 IQKKSTGDSSGVPFICGFLSCSFWLRYGVLTEEQSIVL-VNIIGSTLFLIYTLIYYVFTVNK-RAFVRQFAFVLAVLIAVVVVYTNRLADQRDEMIRITGIFCCIVTVCFFAAPLATLLHVIRAKNSESLPLPLIATSFLVSLQWLIYGILISDSFIQIPNFLGCLLSMLQLSLFVVY-PPRSYS 213
BLAST of DY306104 vs. ExPASy Swiss-Prot
Match: R1AP1_DROME (RAG1-activating protein 1 homolog OS=Drosophila melanogaster GN=slv PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 5.034e-16 Identity = 55/186 (29.57%), Postives = 94/186 (50.54%), Query Frame = 1 Query: 25 VQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLA-GVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIGIPNGSGFIPGAAQLVLYVMYWKPKSSS 579 +Q++ST + +P+I L+ FW+ YG++ N + VN G+ L ++Y +I+ +F + R V G V V ++ RD I V+G + ++ +++PL+++ V+ K+ E +P L F+ W +Y +L D FI IPN G I QL L+V+Y P+S S Sbjct: 33 IQKKSTGDSSGVPFICGFLSCSFWLRYGVLT-NEQSIVLVNIIGSTLFLVYTLIYYVFT---VNKRACVKQFGFVLTVLVVVIVYTNRLEDQRDRMIHVTGIVCCIVTVCFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILSLLQLGLFVLY-PPRSYS 213
BLAST of DY306104 vs. ExPASy Swiss-Prot
Match: R1AP1_MOUSE (RAG1-activating protein 1 OS=Mus musculus GN=Rag1ap1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.263e-15 Identity = 50/195 (25.64%), Postives = 100/195 (51.28%), Query Frame = 1 Query: 19 HIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPM--MRGRTAVLAGVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIGIPNGSGFIPGAAQLVLYVMYWKPKSSSKKIQMM 597 H+ + RS + + +P+++ +N W+ YG++K + L+ VN GA L+ +Y++ +L ++P + +TA L V + + +LV D + +++ G F++ Y SPL+ + +V TKS + + F L+ A W++Y +D +I +PN G + +L L+ Y P +K +++ Sbjct: 32 HMQRTRSVDNIQFLPFLTTDVNNLSWLSYGVLKGDGTLII-VNSVGAVLQTLYILAYLHYSPQKHGVLLQTATLLAVLLLGYGYFWLLVP----DLEARLQQLGLFCSVFTISMYLSPLADLAKIVQTKSTQRLSFSLTIATLFCSASWSIYGFRLRDPYITVPNLPGILTSLIRLGLFCKY--PPEQDRKYRLL 219
BLAST of DY306104 vs. ExPASy Swiss-Prot
Match: R1AP1_XENLA (RAG1-activating protein 1 homolog OS=Xenopus laevis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.712e-14 Identity = 46/179 (25.70%), Postives = 92/179 (51.40%), Query Frame = 1 Query: 22 IVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIGIPNGSGFIPGAAQLVLYVMY 558 +V +RS E + +P+++ LN W +YG +K + L+ VN GA+L+ +Y+ +L+++P + VL + V+ G I D + ++ G F++ Y SPL+ + ++ +KS + + F L+ F+ + W +Y ++ DL+I +PN G + + L+ + Sbjct: 29 MVAQRSVENIQYLPFLTTDLNNLGWFYYGYLKGDGTLMI-VNVIGASLQSLYMGAYLLYSPERRYVGSQVLVSL-GVLLLGYCYFTLWIL-DLNSRLNQLGLFCSVFTISMYLSPLADLAQIIRSKSTKCLSFPLTVATFLTSSSWVLYGLVQSDLYITVPNFPGIVTSLVRFWLFSQF 204
BLAST of DY306104 vs. ExPASy Swiss-Prot
Match: R1AP1_HUMAN (RAG1-activating protein 1 OS=Homo sapiens GN=RAG1AP1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.054e-13 Identity = 46/184 (25.00%), Postives = 95/184 (51.63%), Query Frame = 1 Query: 19 HIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPP--MMRGRTAVLAGVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIGIPNGSGFIPGAAQLVLYVMYWK 564 H+ RS + + +P+++ +N W+ YG +K + +L+ VN GAAL+ +Y++ +L + P ++ +TA L GV + + +LV + + +++ G F++ Y SPL+ + V+ TKS + + + L+ + A W +Y +D +I + N G + + + ++WK Sbjct: 32 HMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGILIV-VNTVGAALQTLYILAYLHYCPRKRVVLLQTATLLGVLLLGYGYFWLLVP----NPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRLRDPYIMVSNFPGIV---TSFIRFWLFWK 207
BLAST of DY306104 vs. ExPASy Swiss-Prot
Match: R1AP1_CAEEL (RAG1-activating protein 1 homolog OS=Caenorhabditis elegans GN=K02D7.5 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.989e-13 Identity = 41/170 (24.12%), Postives = 82/170 (48.24%), Query Frame = 1 Query: 46 EFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIGIPNGSGFIPGAAQLVLYVM 555 + +P++ +L FW+ YG++K + V++ VN G A Y + FLI++ P C ++ +T+ ++ + G + + F+++ + +PL+ + V+ + V +P + F+ + W +Y L D++I IPNG G QL L+V+ Sbjct: 39 DISGVPFLMGVLGGSFWLRYGLLKMDYVMII-VNVVGVACMAFYCVFFLIYSLPKK-------TFTCQLILVTSTIGGMVLWIALKPNLDYLGVICMTFNIMNFGAPLAGLGVVLKNREVSTLPLPMCVANFLVSSQWCLYGNLVSDIYIIIPNGIGMFLAIVQLALFVV 200
BLAST of DY306104 vs. ExPASy Swiss-Prot
Match: R1AP1_DICDI (RAG1-activating protein 1 homolog OS=Dictyostelium discoideum GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.210e-13 Identity = 48/188 (25.53%), Postives = 89/188 (47.34%), Query Frame = 1 Query: 1 PAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVLVT--QIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIGIPNGSGFIPGAAQLVLYVMY 558 P KT I+++++ + +IS +LN + W+ Y ++ N+ ++ VN G I YV + + R + + V T + ++ D D +I GFLS ++ ++SPL M V+ +K+ E M ++ + + G WT++ +L D++I +PN I QL L +Y Sbjct: 28 PLKTIRLIIEKKNVGTVAGLQFISSVLNCFLWISYALLTSNTTMLF-VNSIGMMFSIYYVFNYWKNINQVRASRDYLKKVMIACVLAITIISISYYNTVDDLDTRISRLGFLSSVVCVLMFASPLEKMAIVIQSKNSEGMIINVAILSLLCGLSWTIFGLLLNDIYIYLPNILASILSFVQLTLIKLY 214
BLAST of DY306104 vs. ExPASy Swiss-Prot
Match: R1AP1_DANRE (RAG1-activating protein 1 homolog OS=Danio rerio GN=rag1ap1 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13 Identity = 45/176 (25.57%), Postives = 84/176 (47.73%), Query Frame = 1 Query: 34 RSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIGIPNGSGFIPGAAQLVLYVMYW 561 +S + + +P+++ LN W++YG++K + ++ VN GA L+ +Y+ + + R T L V V V + + + Q+ G F++ Y SPL+ + ++ TKSVE + F L+ F WT+Y + D +I +PN G L+ + ++W Sbjct: 33 QSADNVQFLPFLTTCLNNLGWLYYGLLKGDGTVIF-VNIIGAFLQTVYIATYCHYTKEKRRVYTQTLLMVS--VLCVAWVYFSLVISPGEAQLSQLGLTCSVFTISMYLSPLADLLDIMRTKSVERLSFSLTVATFFTSTSWTLYGLQLGDYYIMVPNTPGIF---TSLIRFFLFW 202
BLAST of DY306104 vs. ExPASy Swiss-Prot
Match: R1AP1_CAEBR (RAG1-activating protein 1 homolog OS=Caenorhabditis briggsae GN=CBG13500 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.887e-13 Identity = 39/184 (21.20%), Postives = 88/184 (47.83%), Query Frame = 1 Query: 46 EFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIGIPNGSGFIPGAAQLVLYVMYWKPKSSSKKIQMM 597 + +P++ +L FW+ YG++K + ++ VN G +Y I FLI++ P C ++ +T+ ++ + G + + F+++ + +PL+ + V+ + V +P + F+ + W +Y L +D++I IPNG G QL L+++ + ++ ++ + Sbjct: 39 DISGVPFLMGVLGGSFWLRYGLLKMDYTMII-VNVVGVFCMAVYCIFFLIYSLPKK-------TFTCQLILVTSTITGMVVWIAFKPNLDYLGIICMTFNIMNFGAPLAGLGVVLRNREVSTLPLPMCVANFLVSSQWCLYGNLVQDIYIIIPNGIGMFLAIVQLSLFIVLPRRENEKSPLEQL 214 The following BLAST results are available for this feature:
BLAST of DY306104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306104 ID=DY306104; Name=DY306104; organism=Citrus sinensis; type=EST; length=966bpback to top |