DY305549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFI_ARATH (Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 1.633e-71 Identity = 125/165 (75.76%), Postives = 141/165 (85.45%), Query Frame = 2 Query: 236 LYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQ-ELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 LY ELWK CAGPLVDVP+ ERVYYFPQGHMEQLEAST Q +LN PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ +EP +PDP P + RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHIFR Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFR 173 HSP 2 Score: 33.8834 bits (76), Expect = 1.633e-71 Identity = 21/44 (47.73%), Postives = 24/44 (54.55%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNFCGL--ENNK*PRGEKRGN 932 P+RHLLT GW V KRL AG F L EN + G +R N Sbjct: 176 PRRHLLTTGWS-TFVTSKRLVAGDTFVFLRGENGELRVGVRRAN 218
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFK_ARATH (Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3) HSP 1 Score: 260.766 bits (665), Expect = 3.623e-71 Identity = 126/169 (74.56%), Postives = 142/169 (84.02%), Query Frame = 2 Query: 221 SNSDDLYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 SN D+LY ELWKACAGPLV+VP+ GERV+YFPQGHMEQL ASTNQ + +Q IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + +P V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVA+DLHGYEWRFKHIFR Sbjct: 34 SNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFR 202 HSP 2 Score: 30.4166 bits (67), Expect = 3.623e-71 Identity = 15/26 (57.69%), Postives = 16/26 (61.54%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNF 884 P+RHLLT GW V KRL AG F Sbjct: 205 PRRHLLTTGWS-TFVTSKRLVAGDAF 229
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFG_ORYSJ (Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 8.763e-70 Identity = 121/168 (72.02%), Postives = 138/168 (82.14%), Query Frame = 2 Query: 221 SNSDDLYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 S+ D LYRELW ACAGPLV VP+QGE VYYFPQGHMEQLEAST+Q+L+Q +PLF LPSKILC+VVN+ L AE ++DEVYAQI L PE QNE T+P P P + + VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM Q+ P QELVA+DLHG EW F+HIFR Sbjct: 18 SSCDALYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCKVVNVELRAETDSDEVYAQIMLQPEADQNELTSPKPEPHEPEKCNVHSFCKTLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFR 185 HSP 2 Score: 31.9574 bits (71), Expect = 8.763e-70 Identity = 21/42 (50.00%), Postives = 24/42 (57.14%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNFCGL--ENNK*PRGEKR 926 P+RHLLT GW V V KRL AG F L EN + G +R Sbjct: 188 PRRHLLTTGWS-VFVSSKRLVAGDAFIFLRGENGELRVGVRR 228
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFR_ARATH (Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 2.314e-67 Identity = 120/169 (71.01%), Postives = 137/169 (81.07%), Query Frame = 2 Query: 221 SNSDDLYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELN-QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 S D LY ELWK CAGPLV+VP+ ERV+YFPQGHMEQL ASTNQ +N + IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + + HSF K+LTASDTSTHGGFSVLRKHATECLP LDM Q+TPTQELV +DLHG+EWRFKHIFR Sbjct: 17 SYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFR 185 HSP 2 Score: 30.0314 bits (66), Expect = 2.314e-67 Identity = 15/26 (57.69%), Postives = 16/26 (61.54%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNF 884 P+RHLLT GW V KRL AG F Sbjct: 188 PRRHLLTTGWS-TFVSSKRLVAGDAF 212
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFI_ORYSJ (Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 3.931e-67 Identity = 119/166 (71.69%), Postives = 135/166 (81.33%), Query Frame = 2 Query: 227 SDDLYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 SD L+RELW ACAGPLV VPK+GERVYYFPQGHMEQLEASTNQ+L+Q +P+F LPSKILC VVN+ L AE ++DEVYAQI L PE Q+E T+ DP D + HSF K LTASDTSTHGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFR Sbjct: 18 SDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFR 183 HSP 2 Score: 31.5722 bits (70), Expect = 3.931e-67 Identity = 16/26 (61.54%), Postives = 17/26 (65.38%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNF 884 P+RHLLT GW V V KRL AG F Sbjct: 186 PRRHLLTTGWS-VFVSSKRLVAGDAF 210
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFA_ARATH (Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 241.891 bits (616), Expect = 1.239e-65 Identity = 116/166 (69.88%), Postives = 133/166 (80.12%), Query Frame = 2 Query: 227 SDDLYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 SD L RELW ACAGPLV +P++GERVYYFP+GHMEQLEAS +Q L Q++P F LPSKILC+V+NI AE ETDEVYAQITLLPE Q+EPT+PD + + VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA DLH EW F+HIFR Sbjct: 16 SDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFR 181 HSP 2 Score: 30.8018 bits (68), Expect = 1.239e-65 Identity = 20/42 (47.62%), Postives = 24/42 (57.14%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNFCGL--ENNK*PRGEKR 926 P+RHLLT GW V V K+L AG F L EN + G +R Sbjct: 184 PRRHLLTTGWS-VFVSSKKLVAGDAFIFLRGENEELRVGVRR 224
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFB_ARATH (Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 6.082e-65 Identity = 115/164 (70.12%), Postives = 134/164 (81.71%), Query Frame = 2 Query: 236 LYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP-ADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 LYRELW ACAGPLV VP+Q +RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+N+ L AE +TDEVYAQITLLPE +Q+E P PR +VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFR Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFR 221 HSP 2 Score: 29.6462 bits (65), Expect = 6.082e-65 Identity = 20/42 (47.62%), Postives = 23/42 (54.76%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNFCGL--ENNK*PRGEKR 926 P+RHLL GW V V KRL AG F L EN + G +R Sbjct: 224 PRRHLLQSGWS-VFVSSKRLVAGDAFIFLRGENGELRVGVRR 264
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFD_ORYSJ (Auxin response factor 4 OS=Oryza sativa subsp. japonica GN=ARF4 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.991e-64 Identity = 114/172 (66.28%), Postives = 132/172 (76.74%), Query Frame = 2 Query: 218 SSNSDDLYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP---RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 SS D LY ELW ACAGPLV VP+ G+ V+YFPQGH+EQ+EAS NQ + ++ L+ LPSK+LCRV+N+ L AEQ+TDEVYAQ+ L+PEP QNE P P RP V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLH +WRF+HIFR Sbjct: 15 SSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFR 186 HSP 2 Score: 29.6462 bits (65), Expect = 2.991e-64 Identity = 20/42 (47.62%), Postives = 23/42 (54.76%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNFCGL--ENNK*PRGEKR 926 P+RHLL GW V V KRL AG F L EN + G +R Sbjct: 189 PRRHLLQSGWS-VFVSSKRLVAGDAFIFLRGENGELRVGVRR 229
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSJ (Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23 PE=1 SV=2) HSP 1 Score: 234.572 bits (597), Expect = 4.248e-63 Identity = 114/171 (66.67%), Postives = 131/171 (76.61%), Query Frame = 2 Query: 230 DDLYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 D L+ ELW ACAGPLV VP+ GE+V+YFPQGH+EQ+EASTNQ QR+ L+ LP KILC V+N+ L AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFR Sbjct: 36 DALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFR 206 HSP 2 Score: 29.6462 bits (65), Expect = 4.248e-63 Identity = 20/42 (47.62%), Postives = 23/42 (54.76%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNFCGL--ENNK*PRGEKR 926 P+RHLL GW V V KRL AG F L EN + G +R Sbjct: 209 PRRHLLQSGWS-VFVSAKRLVAGDAFIFLRGENGELRVGVRR 249
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSI (Auxin response factor 23 OS=Oryza sativa subsp. indica GN=ARF23 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.222e-63 Identity = 114/171 (66.67%), Postives = 131/171 (76.61%), Query Frame = 2 Query: 230 DDLYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 D L+ ELW ACAGPLV VP+ GE+V+YFPQGH+EQ+EASTNQ QR+ L+ LP KILC V+N+ L AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFR Sbjct: 36 DALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPELKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFR 206 HSP 2 Score: 29.6462 bits (65), Expect = 7.222e-63 Identity = 20/42 (47.62%), Postives = 23/42 (54.76%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNFCGL--ENNK*PRGEKR 926 P+RHLL GW V V KRL AG F L EN + G +R Sbjct: 209 PRRHLLQSGWS-VFVSAKRLVAGDAFIFLRGENGELRVGVRR 249 The following BLAST results are available for this feature:
BLAST of DY305549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305549 ID=DY305549; Name=DY305549; organism=Citrus sinensis; type=EST; length=1296bpback to top |