DY305476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CITSI (Cytochrome c biogenesis protein ccsA OS=Citrus sinensis GN=ccsA PE=3 SV=1) HSP 1 Score: 457.603 bits (1176), Expect = 3.892e-133 Identity = 225/249 (90.36%), Postives = 225/249 (90.36%), Query Frame = -1 Query: 78 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN 824 SDLYE IHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGY LVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN Sbjct: 69 SDLYESLIFLSWSLSIIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYAALLCGSLLSTALLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN 317 HSP 2 Score: 40.4318 bits (93), Expect = 3.892e-133 Identity = 24/52 (46.15%), Postives = 28/52 (53.85%), Query Frame = -2 Query: 815 GISIYLIPFY-SMIQRAIASSERGMTATAFCXXXXXXXXXXXLETFPIXVIY 967 GI+IYLI F I+ ASSERGMTATAFC FP+ +Y Sbjct: 21 GITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLY 72
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_EUCGG (Cytochrome c biogenesis protein ccsA OS=Eucalyptus globulus subsp. globulus GN=ccsA PE=3 SV=1) HSP 1 Score: 354.369 bits (908), Expect = 5.211e-98 Identity = 177/253 (69.96%), Postives = 195/253 (77.08%), Query Frame = -1 Query: 72 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN*H 824 SDLYE IH + FK ++N+LS ITAPS FTQGFATSG LT+MHQS I+VPALQ QWLMMHVSMM+LGY LVIT RK IR+F K+ NF+ N SF F EIQYMNE+ NV L + S+RNYYR Q+IQQLD+WSYRIISLGF+FLT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IYLHTRTN WE N AIVAS+GFLIIWICYFGVNLLGIGLHSYGSFN H Sbjct: 69 SDLYESLIFLSWSFSVIHMVPYFKKHKNYLSTITAPSTIFTQGFATSGLLTEMHQSEIVVPALQSQWLMMHVSMMILGYAALLCGSLLSVALLVITLRKAIRVFSKKNNFL--NESFSFVEIQYMNERSNVLLTTSFCSSRNYYRAQLIQQLDQWSYRIISLGFLFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTLFAIYLHTRTNKNWESFNCAIVASIGFLIIWICYFGVNLLGIGLHSYGSFNLH 319 HSP 2 Score: 26.5646 bits (57), Expect = 5.211e-98 Identity = 13/33 (39.39%), Postives = 16/33 (48.48%), Query Frame = -2 Query: 815 SSERGMTATAFCXXXXXXXXXXXLETFPIXVIY 913 SSE+GMTAT FC FP+ +Y Sbjct: 40 SSEKGMTATFFCITGLLVTRWIYSGHFPLSDLY 72
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_GOSHI (Cytochrome c biogenesis protein ccsA OS=Gossypium hirsutum GN=ccsA PE=3 SV=1) HSP 1 Score: 353.599 bits (906), Expect = 1.969e-97 Identity = 180/252 (71.43%), Postives = 194/252 (76.98%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKI--FDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + FK +N+LSAITAPSA FTQGFATSG LTKMHQS IL PALQ QWLMMHVSMMVLGY LVITFRK I++ + NF SF F +IQYMNE+ NV LN+ LS++NYYRYQ+ QQLDRWSYRIISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IY HTRTNT EGVNSA+VASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 71 SDLYESLIFLSWGFSLIHMVSYLKFKKRKNNLSAITAPSAIFTQGFATSGLLTKMHQSAILAPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKAIKIIGENNNF-----SFSFGKIQYMNERSNVLLNTYFLSSKNYYRYQLTQQLDRWSYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTVFAIYFHTRTNTNLEGVNSALVASMGFLIIWICYFGVNLLGIGLHSYGSF 317 HSP 2 Score: 25.409 bits (54), Expect = 1.969e-97 Identity = 13/53 (24.53%), Postives = 23/53 (43.40%), Query Frame = -2 Query: 815 ISIYLIPFYSMIQRAIA---SSERGMTATAFCXXXXXXXXXXXLETFPIXVIY 964 I+I+ + + ++ + SSE+GM T FC FP+ +Y Sbjct: 22 ITIHFLTLFLLVDEVVGLYDSSEKGMIVTFFCITGLLVTRWIYSGHFPLSDLY 74
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_GOSBA (Cytochrome c biogenesis protein ccsA OS=Gossypium barbadense GN=ccsA PE=3 SV=1) HSP 1 Score: 351.673 bits (901), Expect = 7.443e-97 Identity = 179/252 (71.03%), Postives = 193/252 (76.59%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKI--FDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + FK +N+LSAITAP A FTQGFATSG LTKMHQS IL PALQ QWLMMHVSMMVLGY LVITFRK I++ + NF SF F +IQYMNE+ NV LN+ LS++NYYRYQ+ QQLDRWSYRIISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IY HTRTNT EGVNSA+VASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 71 SDLYESLIFLSWGFSLIHMVSYLKFKKRKNNLSAITAPRAIFTQGFATSGLLTKMHQSAILAPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKAIKIIGENNNF-----SFSFGKIQYMNERSNVLLNTYFLSSKNYYRYQLTQQLDRWSYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTVFAIYFHTRTNTNLEGVNSALVASMGFLIIWICYFGVNLLGIGLHSYGSF 317 HSP 2 Score: 25.409 bits (54), Expect = 7.443e-97 Identity = 13/53 (24.53%), Postives = 23/53 (43.40%), Query Frame = -2 Query: 815 ISIYLIPFYSMIQRAIA---SSERGMTATAFCXXXXXXXXXXXLETFPIXVIY 964 I+I+ + + ++ + SSE+GM T FC FP+ +Y Sbjct: 22 ITIHFLTLFLLVDEVVGLYDSSEKGMIVTFFCITGLLVTRWIYSGHFPLSDLY 74
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_MANES (Cytochrome c biogenesis protein ccsA OS=Manihot esculenta GN=ccsA PE=3 SV=1) HSP 1 Score: 350.132 bits (897), Expect = 1.489e-95 Identity = 178/250 (71.20%), Postives = 193/250 (77.20%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + FK ++N LSAITAPS FFTQGFATSG LT MHQS ILVPALQ QWLMMHVSMM+LGY LVITFRK+IR+F K N + N SF FSEIQYM E+KNV N LS+RNYYR+Q+IQQLD W YRIIS+GFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IY H RTN K EG +SAIVAS+GFL+IWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWSFSIIHMVPYFKKHKNFLSAITAPSTFFTQGFATSGLLTDMHQSEILVPALQSQWLMMHVSMMILGYAALLCGSLFSVAFLVITFRKIIRIFDKSNNLL--NNSFFFSEIQYMAERKNVLRNISFLSSRNYYRFQLIQQLDDWGYRIISIGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYFHIRTNKKLEGFHSAIVASIGFLLIWICYFGVNLLGIGLHSYGSF 316
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_VITVI (Cytochrome c biogenesis protein ccsA OS=Vitis vinifera GN=ccsA PE=3 SV=1) HSP 1 Score: 346.28 bits (887), Expect = 6.836e-95 Identity = 177/250 (70.80%), Postives = 191/250 (76.40%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + FK ++NHLSA+TAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVLGY LVITFR+ IR+ K +F+ N SF F EIQYMN+ NV N+ LS RNYYR Q IQQLD WSYR+ISLGF+FLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLHTRTN + NSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWSFSIIHIVPYFKKHKNHLSALTAPSAIFTQGFATSGLLTEMHQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRQDIRILCKNNHFL--NKSFSFDEIQYMNKGNNVLQNTSFLSVRNYYRAQFIQQLDHWSYRVISLGFLFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNLQVANSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 316 HSP 2 Score: 24.2534 bits (51), Expect = 6.836e-95 Identity = 13/33 (39.39%), Postives = 16/33 (48.48%), Query Frame = -2 Query: 815 SSERGMTATAFCXXXXXXXXXXXLETFPIXVIY 913 SSE+GM AT FC L FP+ +Y Sbjct: 40 SSEKGMIATFFCITGLLVTRWIYLGHFPLSDLY 72
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_MORIN (Cytochrome c biogenesis protein ccsA OS=Morus indica GN=ccsA PE=3 SV=1) HSP 1 Score: 347.821 bits (891), Expect = 7.391e-95 Identity = 178/250 (71.20%), Postives = 192/250 (76.80%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + FK +N+L AITAPSA FTQGFATSG LT+MHQS ILVPALQ WLMMHVSMMVLGY LVITFRK I +F K NFV N SF EIQY+ EK N+ N+ LS+RNYYR+Q+IQQLD WSYRIISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IYLHTRTN +E VNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SNLYESLIFLSWSFSIIHMVPYFKKYKNYLKAITAPSAIFTQGFATSGLLTEMHQSEILVPALQSHWLMMHVSMMVLGYAALLCGSLLSLALLVITFRKFISIFSKSNNFV--NESFSLGEIQYVREKNNLLPNTSFLSSRNYYRFQLIQQLDLWSYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTLFSIYLHTRTNKNFESVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 316
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CARPA (Cytochrome c biogenesis protein ccsA OS=Carica papaya GN=ccsA PE=3 SV=1) HSP 1 Score: 346.28 bits (887), Expect = 2.151e-94 Identity = 179/251 (71.31%), Postives = 194/251 (77.29%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + F K ++N+L+AIT PSA TQGFATSG L KM QS ILVPALQ QWLMMHVSMMVLGY LVITFRKVIR+F K NF+ N SF F +IQYMNE+ N+ LN+ LS+RNYYRYQ+IQQLD WSYRIISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLH RTN G+NSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SNLYESLIFLSWSFSIIHMVCYFNKKHKNNLNAITGPSAILTQGFATSGLLNKMSQSVILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKVIRIFGKSNNFL--NESFSFGKIQYMNERSNILLNTSFLSSRNYYRYQLIQQLDHWSYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHIRTNINLGGINSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 317
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_PLAOC (Cytochrome c biogenesis protein ccsA OS=Platanus occidentalis GN=ccsA PE=3 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 9.760e-94 Identity = 175/250 (70.00%), Postives = 193/250 (77.20%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + +N++NHLSAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVL Y LVI FRK I +F K N++ + GSF F E QY+NE+ N+ N+ LS RNYYRYQ+IQQLD WSYR+ISLGFIFLT GILSGAVWANEAWG+YWNWDPKETWAFITWTIF IYLHTRTN +G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWSFSIIHMVPKIRNHKNHLSAITAPSAIFTQGFATSGLLTEMHQSAILVPALQSQWLMMHVSMMVLSYAALLCGSLLSIALLVIRFRKNIEIFGK-DNYLLI-GSFSFGESQYVNERSNILRNTSFLSFRNYYRYQLIQQLDHWSYRVISLGFIFLTIGILSGAVWANEAWGAYWNWDPKETWAFITWTIFAIYLHTRTNKDLQGANSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 316 HSP 2 Score: 23.0978 bits (48), Expect = 9.760e-94 Identity = 17/64 (26.56%), Postives = 28/64 (43.75%), Query Frame = -2 Query: 815 IYLFVCFNGISIYL-IPFYSMIQRAIA----SSERGMTATAFCXXXXXXXXXXXLETFPIXVIY 991 I+ + F+ +SI + I +++ I SSE+GM AT C FP+ +Y Sbjct: 9 IFTHISFSIVSIVITIHLMTLLVDGIVGLYDSSEKGMIATFLCITGFLVTRWIYSRHFPLSDLY 72
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_BUXMI (Cytochrome c biogenesis protein ccsA OS=Buxus microphylla GN=ccsA PE=3 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 3.105e-93 Identity = 175/250 (70.00%), Postives = 192/250 (76.80%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH I FKN++NHLS +TAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVL Y LVITFRK I +F KR + + GSF F EIQY NE+ NV N LS RNY RYQ+I+QLD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLHTRTN ++G +SAIVAS+GF+IIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SNLYESLIFLSWSFSIIHMIPYFKNHKNHLSLVTAPSAIFTQGFATSGLLTEMHQSAILVPALQSQWLMMHVSMMVLSYGALLCGSLLSVALLVITFRKNIDIFGKRNHLLI--GSFSFGEIQYTNERSNVLRNVSFLSLRNYRRYQLIRQLDNWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFQGADSAIVASIGFIIIWICYFGVNLLGIGLHSYGSF 316 The following BLAST results are available for this feature:
BLAST of DY305476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305476 ID=DY305476; Name=DY305476; organism=Citrus sinensis; type=EST; length=1202bpback to top |