CX301033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_DANRE (60S ribosomal protein L23 OS=Danio rerio GN=rpl23 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 2.727e-61 Identity = 110/136 (80.88%), Postives = 128/136 (94.12%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSI 482 +GRGG+ G KFR +LGLPVGAV+NCADNTGAK+L IISV GIKGRLN+LPSA VGD+VMA+ KKGKPELRKKVHPAV++RQRK++RRK+G+++YFEDNAGVIVNNKGEMKGSA+ GPVAKECADLWPRIASN+GSI Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_RAT (60S ribosomal protein L23 OS=Rattus norvegicus GN=Rpl23 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.076e-61 Identity = 109/136 (80.15%), Postives = 128/136 (94.12%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSI 482 +GRGG+ G KFR +LGLPVGAV+NCADNTGAK+L IISV GIKGRLN+LP+A VGD+VMA+ KKGKPELRKKVHPAV++RQRK++RRK+G+++YFEDNAGVIVNNKGEMKGSA+ GPVAKECADLWPRIASN+GSI Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_PIG (60S ribosomal protein L23 OS=Sus scrofa GN=RPL23 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.076e-61 Identity = 109/136 (80.15%), Postives = 128/136 (94.12%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSI 482 +GRGG+ G KFR +LGLPVGAV+NCADNTGAK+L IISV GIKGRLN+LP+A VGD+VMA+ KKGKPELRKKVHPAV++RQRK++RRK+G+++YFEDNAGVIVNNKGEMKGSA+ GPVAKECADLWPRIASN+GSI Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_MOUSE (60S ribosomal protein L23 OS=Mus musculus GN=Rpl23 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.076e-61 Identity = 109/136 (80.15%), Postives = 128/136 (94.12%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSI 482 +GRGG+ G KFR +LGLPVGAV+NCADNTGAK+L IISV GIKGRLN+LP+A VGD+VMA+ KKGKPELRKKVHPAV++RQRK++RRK+G+++YFEDNAGVIVNNKGEMKGSA+ GPVAKECADLWPRIASN+GSI Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_ICTPU (60S ribosomal protein L23 OS=Ictalurus punctatus GN=rpl23 PE=2 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 6.076e-61 Identity = 109/136 (80.15%), Postives = 128/136 (94.12%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSI 482 +GRGG+ G KFR +LGLPVGAV+NCADNTGAK+L IISV GIKGRLN+LP+A VGD+VMA+ KKGKPELRKKVHPAV++RQRK++RRK+G+++YFEDNAGVIVNNKGEMKGSA+ GPVAKECADLWPRIASN+GSI Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_HUMAN (60S ribosomal protein L23 OS=Homo sapiens GN=RPL23 PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.076e-61 Identity = 109/136 (80.15%), Postives = 128/136 (94.12%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSI 482 +GRGG+ G KFR +LGLPVGAV+NCADNTGAK+L IISV GIKGRLN+LP+A VGD+VMA+ KKGKPELRKKVHPAV++RQRK++RRK+G+++YFEDNAGVIVNNKGEMKGSA+ GPVAKECADLWPRIASN+GSI Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_BOVIN (60S ribosomal protein L23 OS=Bos taurus GN=RPL23 PE=2 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 6.076e-61 Identity = 109/136 (80.15%), Postives = 128/136 (94.12%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSI 482 +GRGG+ G KFR +LGLPVGAV+NCADNTGAK+L IISV GIKGRLN+LP+A VGD+VMA+ KKGKPELRKKVHPAV++RQRK++RRK+G+++YFEDNAGVIVNNKGEMKGSA+ GPVAKECADLWPRIASN+GSI Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_PONAB (60S ribosomal protein L23 OS=Pongo abelii GN=RPL23 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.768e-60 Identity = 108/136 (79.41%), Postives = 128/136 (94.12%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSI 482 +GRGG+ G KFR +LGLPVGAV+NCADNTGAK+L IISV GIKG+LN+LP+A VGD+VMA+ KKGKPELRKKVHPAV++RQRK++RRK+G+++YFEDNAGVIVNNKGEMKGSA+ GPVAKECADLWPRIASN+GSI Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGQLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_CANFA (60S ribosomal protein L23 OS=Canis familiaris GN=RPL23 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.687e-59 Identity = 106/136 (77.94%), Postives = 125/136 (91.91%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSI 482 +GRGG+ G KFR +LGLPVGAV+NCADNTGAK+L IISV GIKGRLN+LP+A VGD+VMA+ KKGKP LRKKVHPAV++RQRK++RRK+G+++YFEDNAGVIVNNKGEMKGSA+ GPV KECADLWP IASN+GSI Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPXLRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVXKECADLWPXIASNAGSI 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_CAEEL (60S ribosomal protein L23 OS=Caenorhabditis elegans GN=rpl-23 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.401e-57 Identity = 105/136 (77.21%), Postives = 122/136 (89.71%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSI 482 +GRGGA G KFR +LGLPVGAV+NCADNTGAK+L +ISVYGI+GRLN+LPSA VGD+ + S KKGKPELRKKV V++RQRK +RRK+G +IYFEDNAGVIVNNKGEMKGSA+ GPVAKECADLWPRIA+N+GSI Sbjct: 4 RGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVISVYGIRGRLNRLPSAGVGDMFVCSVKKGKPELRKKVLQGVVIRQRKQFRRKDGTFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIAANAGSI 139 The following BLAST results are available for this feature:
BLAST of CX301033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301033 ID=CX301033; Name=CX301033; organism=Citrus sinensis; type=EST; length=663bpback to top |