CX300890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHOA_EMENI (GTP-binding protein rhoA OS=Emericella nidulans GN=rhoA PE=3 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 8.267e-80 Identity = 140/162 (86.42%), Postives = 150/162 (92.59%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGACGKTCLLIVFSKG FPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVIL+CF+VD+PDSL+NVQEKWISEVLHFCQGLPIILVGCK+DLR D KTIEEL K QKPV+ E+G V KIGAYKYLECSAR+ +GV+EVFE Sbjct: 11 VGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRHDPKTIEELNKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFE 172
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO1_SCHPO (GTP-binding protein rho1 OS=Schizosaccharomyces pombe GN=rho1 PE=1 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 2.940e-77 Identity = 135/162 (83.33%), Postives = 148/162 (91.36%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGACGKTCLLIVFSKG FPEVYVPTVFENYVADVEVDG+HVELALWDTAGQEDYDRLRPLSYPDSHVIL+CF+VD+PDSL+NVQEKWISEVLHFC LPI+LV CK DLR+D K IEEL+K Q PV+ EEG AVA KIGAYKYLECSA++ +GV+EVFE Sbjct: 12 VGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFE 173
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO5_SCHPO (GTP-binding protein rho5 OS=Schizosaccharomyces pombe GN=rho5 PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 5.016e-77 Identity = 134/162 (82.72%), Postives = 147/162 (90.74%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGACGKTCLLIVFSKG FPEVYVPTVFENYVADVEVDG+H+ELALWDTAGQEDYDRLRPLSYPDSHV+L+CFSVD P+SL+NVQEKWISEVLHFC LPI+LVGCK DLR+D KTIEEL+K QKP++ EEG VA KIGAYKYLECSA+ +GV EVFE Sbjct: 12 VGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFE 173
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO1_CANAL (GTP-binding protein RHO1 OS=Candida albicans GN=RHO1 PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.156e-73 Identity = 132/162 (81.48%), Postives = 145/162 (89.51%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGACGKTCLLIVFSKG FPEVYVPTVFENYVADVEVDG+ VELALWDTAGQEDYDRLRPLSYPDS+VIL+CFSVD+PDSL+NV EKWISEVLHFCQG+PIILVGCK DLRDD TIE L + +Q+PVS EG VA +IGA YLECSA++G GV+EVFE Sbjct: 15 VGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRKVELALWDTAGQEDYDRLRPLSYPDSNVILICFSVDSPDSLDNVLEKWISEVLHFCQGVPIILVGCKSDLRDDPHTIEALRQQQQQPVSTSEGQQVAQRIGAADYLECSAKTGRGVREVFE 176
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO1_YEAST (GTP-binding protein RHO1 OS=Saccharomyces cerevisiae GN=RHO1 PE=1 SV=3) HSP 1 Score: 273.092 bits (697), Expect = 7.495e-73 Identity = 128/162 (79.01%), Postives = 148/162 (91.36%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGACGKTCLLIVFSKG+FPEVYVPTVFENYVADVEVDG+ VELALWDTAGQEDYDRLRPLSYPDS+V+L+CFS+D PDSLENVQEKWI+EVLHFCQG+PIILVGCK DLR+D +TIE+L + Q+PV+ +EG +VA +IGA Y ECSA++G GV+EVFE Sbjct: 16 VGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFE 177
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO1_CAEEL (Ras-like GTP-binding protein rhoA OS=Caenorhabditis elegans GN=rho-1 PE=2 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 2.666e-70 Identity = 125/182 (68.68%), Postives = 146/182 (80.22%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFEHXXXXXXXXXXXXXXGCLIL 547 VGDGACGKTCLLIVFSK +FP+VYVPTVFENYVAD+EVDGK VELALWDTAGQEDYDRLRPLSYPD+ VIL+CFS+D+PDSLEN+ EKW EV HFC +PIILVG KRDLR D +T+ ELAK KQ+PV E+G A+A +IGA+ YLECSA++ DG++EVFE C+IL Sbjct: 11 VGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLRSDPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAALQQKKKKKSKCMIL 192
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO1_ASHGO (GTP-binding protein RHO1 OS=Ashbya gossypii GN=RHO1 PE=3 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 3.481e-70 Identity = 122/162 (75.31%), Postives = 146/162 (90.12%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGACGKTCLLIVF+KG+FP+VYVPTVF+NYVADVEVDG+ VELALWDTAGQEDYDRLRPLSYPDS+V+L+C+S+D PDSLENV EKWISEVL+FCQG+PIILVGCK DLR+D + IE+L + Q+PVSQ + VA +IGA +Y+ECSA++G GV+EVFE Sbjct: 17 VGDGACGKTCLLIVFAKGKFPQVYVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLYFCQGVPIILVGCKADLRNDPQVIEQLRQQGQQPVSQAQAQEVADQIGAVEYIECSAKTGFGVREVFE 178
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO1_KLULA (GTP-binding protein Rho1 OS=Kluyveromyces lactis GN=RHO1 PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 7.756e-70 Identity = 122/162 (75.31%), Postives = 143/162 (88.27%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGACGKTCLLIVF+KG+FP+VYVPTVF+NYVADVEVDG+ VELALWDTAGQEDYDRLRPLSYPDS+V+L+C+S+D PDSLENV EKWISEVLHFCQG+PIILVGCK DLR+D + +EEL +PVSQ + VA +IGA Y+ECSA++G GV+EVFE Sbjct: 18 VGDGACGKTCLLIVFAKGKFPQVYVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLHFCQGVPIILVGCKADLRNDPQVVEELRAQGLQPVSQAQAQEVADQIGAVDYIECSAKTGYGVREVFE 179
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO1_DROME (Ras-like GTP-binding protein Rho1 OS=Drosophila melanogaster GN=Rho1 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 2.947e-69 Identity = 126/182 (69.23%), Postives = 145/182 (79.67%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFEHXXXXXXXXXXXXXXGCLIL 547 VGDGACGKTCLLIVFSK +FPEVYVPTVFENYVAD+EVDGK VELALWDTAGQEDYDRLRPLSYPD+ VIL+CFSVD+PDSLEN+ EKW EV HFC +PIILVG K+DLR+D TI +LAK KQ+PV +EG A+A KI A+ YLECSA+S +GV++VFE CL+L Sbjct: 11 VGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKRKKTRCLLL 192
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO_APLCA (Ras-like GTP-binding protein RHO OS=Aplysia californica GN=RHO PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 6.566e-69 Identity = 124/182 (68.13%), Postives = 144/182 (79.12%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFEHXXXXXXXXXXXXXXGCLIL 547 VGDGACGKTCLLIVFSK +FPEVYVPTVFENYVAD+EVDGK VELALWDTAGQEDYDRLRPLSYPD+ VIL+CFS+D+PDSLEN+ EKW EV HFC +PIILVG K+DLR+D T EL K KQ+PV E+G A+A KI AY YLECSA++ +GV++VFE GC++L Sbjct: 11 VGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKKDLRNDESTKRELMKMKQEPVRPEDGRAMAEKINAYSYLECSAKTKEGVRDVFETATRAALQVKKKKKGGCVVL 192 The following BLAST results are available for this feature:
BLAST of CX300890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 427
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300890 ID=CX300890; Name=CX300890; organism=Citrus sinensis; type=EST; length=599bpback to top |