CX300880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KCC1D_HUMAN (Calcium/calmodulin-dependent protein kinase type 1D OS=Homo sapiens GN=CAMK1D PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.809e-35 Identity = 71/147 (48.30%), Postives = 88/147 (59.86%), Query Frame = 2 Query: 2 ACGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYN---ARRRFRSAIRAVQITQLLRKLHPGAS 433 ACGTPGYVAPE+L Y K VD WSIGVI YILLCG+PPFYD+N+ KLF QI+ A Y F PYW +IS AKD + L+ DPNKR +Q HPW+ D A+ ++R A A + + +RKLH G+S Sbjct: 181 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALNKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKLHLGSS 327
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MYLKA_DICDI (Myosin light chain kinase A OS=Dictyostelium discoideum GN=mlkA PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.284e-33 Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 2 ACGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM 298 ACGTP YVAPE+L T Y K+VD+WSIGVI YILLCGFPPFY D ++F QI+ ANY FP+ YW IS AKD + KLL+VD +KRLNA L HPW+ Sbjct: 167 ACGTPSYVAPEVLNATGYDKEVDMWSIGVITYILLCGFPPFYGDTVPEIFEQIMEANYEFPEEYWGGISKEAKDFIGKLLVVDVSKRLNATNALNHPWL 265
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KCC4_MOUSE (Calcium/calmodulin-dependent protein kinase type IV OS=Mus musculus GN=Camk4 PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.284e-33 Identity = 81/215 (37.67%), Postives = 115/215 (53.49%), Query Frame = 2 Query: 5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKK-LFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM--HEDGXXXXXXXXXXXXXYNARRRFRSAIRAVQITQLLRKLHPG---------ASAKPVSILSAVESEETSGENTTQPNTSNHSNEGSEPATHANSFKS-PLESDS---EEDTNT 601 CGTPGY APEILRG AYG +VD+WS+G+I YILLCGF PFYD+ + +F +I+N Y F P+W +S AKDLV KL+++DP KRL Q L HPW+ +NARR+ ++A++AV + L AS+ P S A +S + G+ + + E A +S +E D+ EE+T++ Sbjct: 198 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVKKLIVLDPKKRLTTFQALQHPWVTGKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVASSRLGSASSSHTSIQENHKASSDPPSTQDAKDSTDLLGKKMQEEDQEEDQVEAEASADEMRKLQSEEVEKDAGVKEEETSS 412
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KCC1D_MOUSE (Calcium/calmodulin-dependent protein kinase type 1D OS=Mus musculus GN=Camk1d PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.284e-33 Identity = 69/147 (46.94%), Postives = 87/147 (59.18%), Query Frame = 2 Query: 2 ACGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYN---ARRRFRSAIRAVQITQLLRKLHPGAS 433 ACGTPGYVAPE+L Y K VD WSIGVI YILLCG+PPFYD+N+ KLF QI+ A Y F PYW +IS AKD + L+ DPNKR +Q HPW+ D A+ ++R A A + + +R+L G+S Sbjct: 181 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRRLQLGSS 327
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MYLKB_DICDI (Probable myosin light chain kinase DDB_G0271550 OS=Dictyostelium discoideum GN=DDB_G0271550 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.677e-33 Identity = 79/205 (38.54%), Postives = 109/205 (53.17%), Query Frame = 2 Query: 2 ACGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM---HEDGXXXXXXXXXXXXXYNARRRFRSA--IRAVQITQLLRKLHPGASAKPVSILSAVESEE-TSGENTTQPNTSNHSNEGSEPATHANSFKSPLESDSEEDTN 598 ACGTP YVAPEIL Y VD+WSIGVI YILLCGF PFY D + +LF +I++ Y FP+P W I+ LAKD +S+LLI++P +R A Q + HPW+ H D R R S I ++ +Q LH S + LS+ S TS N N SN+SN + + + N+ + +++ + N Sbjct: 180 ACGTPDYVAPEILECKPYDTSVDMWSIGVITYILLCGFAPFYADTHHELFQKILDLEYDFPEPEWNGITDLAKDFISQLLIINPEERWTASQCIKHPWLAENHGDKELKSLDSAISSMKDYVRNREASTSNILKMRASQSTPNLHSANSNTNTNSLSSSNSNNTTSNSNNNNNNNSNNSNNNNNNSNNNNNINNNNNNNNNNNNN 384
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KCC1A_RAT (Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus GN=Camk1 PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 2.861e-33 Identity = 69/147 (46.94%), Postives = 86/147 (58.50%), Query Frame = 2 Query: 2 ACGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYN---ARRRFRSAIRAVQITQLLRKLHPGAS 433 ACGTPGYVAPE+L Y K VD WSIGVI YILLCG+PPFYD+N+ KLF QI+ A Y F PYW +IS AKD + L+ DP KR +Q L HPW+ D A+ +++ A A + + +RKL G S Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVVRHMRKLQLGTS 324
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KCC1A_MOUSE (Calcium/calmodulin-dependent protein kinase type 1 OS=Mus musculus GN=Camk1 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.861e-33 Identity = 69/147 (46.94%), Postives = 86/147 (58.50%), Query Frame = 2 Query: 2 ACGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYN---ARRRFRSAIRAVQITQLLRKLHPGAS 433 ACGTPGYVAPE+L Y K VD WSIGVI YILLCG+PPFYD+N+ KLF QI+ A Y F PYW +IS AKD + L+ DP KR +Q L HPW+ D A+ +++ A A + + +RKL G S Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVVRHMRKLQLGTS 324
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KCC1A_HUMAN (Calcium/calmodulin-dependent protein kinase type 1 OS=Homo sapiens GN=CAMK1 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.861e-33 Identity = 69/147 (46.94%), Postives = 86/147 (58.50%), Query Frame = 2 Query: 2 ACGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYN---ARRRFRSAIRAVQITQLLRKLHPGAS 433 ACGTPGYVAPE+L Y K VD WSIGVI YILLCG+PPFYD+N+ KLF QI+ A Y F PYW +IS AKD + L+ DP KR +Q L HPW+ D A+ +++ A A + + +RKL G S Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVVRHMRKLQLGTS 324
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KCC4_RAT (Calcium/calmodulin-dependent protein kinase type IV OS=Rattus norvegicus GN=Camk4 PE=1 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 6.373e-33 Identity = 77/200 (38.50%), Postives = 110/200 (55.00%), Query Frame = 2 Query: 5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKK-LFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM--HEDGXXXXXXXXXXXXXYNARRRFRSAIRAVQITQLLRKLHPGASAKPVSILSAVESEET-SGENTTQPNTSNHSNEGSEPATHANSFKSPLESDSEED 592 CGTPGY APEILRG AYG +VD+WS+G+I YILLCGF PFYD+ + +F +I+N Y F P+W +S AKDLV KL+++DP KRL Q L HPW+ +NARR+ ++A++AV + L + S ++ E++ G++ T P + E A A L+S+ E+ Sbjct: 198 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVKKLIVLDPKKRLTTFQALQHPWVTGKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVASSRLGSASSSHTNIQESNKASSEAQPAQDGKDKTDPLENKMQAGDHEAAKAAADETMKLQSEEVEE 397
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KCC4_HUMAN (Calcium/calmodulin-dependent protein kinase type IV OS=Homo sapiens GN=CAMK4 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.131e-32 Identity = 65/132 (49.24%), Postives = 86/132 (65.15%), Query Frame = 2 Query: 5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKK-LFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM--HEDGXXXXXXXXXXXXXYNARRRFRSAIRAV 391 CGTPGY APEILRG AYG +VD+WS+G+I YILLCGF PFYD+ + +F +I+N Y F P+W +S AKDLV KL+++DP KRL Q L HPW+ +NARR+ ++A++AV Sbjct: 202 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFVHMDTAQKKLQEFNARRKLKAAVKAV 333 The following BLAST results are available for this feature:
BLAST of CX300880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300880 ID=CX300880; Name=CX300880; organism=Citrus sinensis; type=EST; length=630bpback to top |