DR908167
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908167 vs. ExPASy Swiss-Prot
Match: UFD1_DICDI (Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum GN=ufd1 PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.999e-60 Identity = 107/187 (57.22%), Postives = 143/187 (76.47%), Query Frame = 3 Query: 102 FEQSYRCYPASFI--EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPIASA 656 +EQ ++ +P SF+ EK +ESG KI++PPSAL+ L+ L+I YPMLFE+ N + + SHCGVLEFIAEEG+ Y+P WMM+NL L+EG+ + +KN TL KGT+VK+QP T +F+DISNPKA+LE +LR ++ LT D IM+ YNN KYY+ ++E KP+NAISIIE D VDFAPP+D KE P S+ Sbjct: 25 YEQKFKAFPISFLPKEKHSLESGGKILLPPSALNALSRLNIQYPMLFEISNPISGKKSHCGVLEFIAEEGICYLPLWMMQNLQLKEGEFIDIKNATLAKGTFVKIQPRTSNFIDISNPKAVLENSLRKFATLTKDDEIMIDYNNTKYYLKVVELKPANAISIIEADVSVDFAPPMDSKEATSPSTSS 211
BLAST of DR908167 vs. ExPASy Swiss-Prot
Match: UFD1_RAT (Ubiquitin fusion degradation protein 1 homolog OS=Rattus norvegicus GN=Ufd1l PE=1 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.770e-59 Identity = 106/191 (55.50%), Postives = 140/191 (73.30%), Query Frame = 3 Query: 102 FEQSYRCYPASFIEKPQ----IESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPIASASS 662 F YRC+ S + P +E G KIIMPPSALD+L+ L+I YPMLF+L N ++R++HCGVLEF+A+EG+ Y+P+WMM+NLLL+EG +V+V++V L TY K QP + DFLDI+NPKA+LE LRN++CLTTGD I + YN K Y + ++ETKP A+SIIE D VDF PL YKEPE+P+ S Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERPVQHEES 209
BLAST of DR908167 vs. ExPASy Swiss-Prot
Match: UFD1_MOUSE (Ubiquitin fusion degradation protein 1 homolog OS=Mus musculus GN=Ufd1l PE=1 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.871e-58 Identity = 104/191 (54.45%), Postives = 140/191 (73.30%), Query Frame = 3 Query: 102 FEQSYRCYPASFIEKPQ----IESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPIASASS 662 F YRC+ S + P +E G KIIMPPSALD+L+ L+I YPMLF+L N ++R++HCGVLEF+A+EG+ Y+P+WMM+NLLL+EG +V+V++V L TY K QP + DFLDI+NPKA+LE LRN++C+TTGD I + YN K Y + ++ETKP A+SIIE D VDF PL YKEP++P+ S Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACMTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPKRPVQHEES 209
BLAST of DR908167 vs. ExPASy Swiss-Prot
Match: UFD1_HUMAN (Ubiquitin fusion degradation protein 1 homolog OS=Homo sapiens GN=UFD1L PE=1 SV=3) HSP 1 Score: 224.942 bits (572), Expect = 3.192e-58 Identity = 105/191 (54.97%), Postives = 139/191 (72.77%), Query Frame = 3 Query: 102 FEQSYRCYPASFIEKPQ----IESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPIASASS 662 F YRC+ S + P +E G KIIMPPSALD+L+ L+I YPMLF+L N ++R++HCGVLEF+A+EG+ Y+P+WMM+NLLL+EG +V+V++V L TY K QP + DFLDI+NPKA+LE LRN++CLTTGD I + YN K Y + ++ETKP A+SIIE D VDF PL YKEPE+ + S Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQVQHEES 209
BLAST of DR908167 vs. ExPASy Swiss-Prot
Match: UFD1_DROME (Ubiquitin fusion degradation protein 1 homolog OS=Drosophila melanogaster GN=Ufd1-like PE=1 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.529e-57 Identity = 108/214 (50.47%), Postives = 146/214 (68.22%), Query Frame = 3 Query: 42 FEYSFTVKMFFDGYGYHGTSFEQSYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPIASASSRATA 674 F +S MF +G +H +Y+C+ S + E+ +E G KIIMPPSALD L L+++YPMLF+L N R SH GVLEF+A+EG Y+P+WMMENLLL EGDI+ +++V+LP T+ K QPH+ DFLDI+NPKA+LE LRN++CLT GD I + YN K Y + ++ETKP NA+SIIE D V+F P+ YK+ + AS S + A Sbjct: 2 FHFSGFNMMFPEGRNFHA-----NYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFSKFQPHSTDFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKDHSETQASGSGQQGA 210
BLAST of DR908167 vs. ExPASy Swiss-Prot
Match: UFD1_SCHPO (Ubiquitin fusion degradation protein 1 OS=Schizosaccharomyces pombe GN=ufd1 PE=2 SV=4) HSP 1 Score: 197.593 bits (501), Expect = 5.457e-50 Identity = 91/183 (49.73%), Postives = 132/183 (72.13%), Query Frame = 3 Query: 102 FEQSYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNA---ISIIETDCEVDFAPPLDYKE 632 F+ YRCYP + I E+P + G K+I+PPSAL++L+ L++ YPMLF+ N AAE+ +H GVLEFIAEEG +Y+PYWMM L L+ GD+VRV N + +G+YVKLQP + +FLDI++ +A+LE LRN+S LT D + YN++ Y I +I+ +P ++ +S++ETD VDF PP+ Y+E Sbjct: 32 FDTRYRCYPVAMIPGEERPNVNYGGKVILPPSALEKLSRLNVSYPMLFDFENEAAEKKTHGGVLEFIAEEGRVYLPYWMMTTLSLEPGDLVRVINTDIAQGSYVKLQPQSVNFLDITDHRAVLENALRNFSTLTKSDIFEILYNDQVYQIKVIDVQPDDSRHVVSVVETDLVVDFDPPIGYEE 214
BLAST of DR908167 vs. ExPASy Swiss-Prot
Match: UFD1_YEAST (Ubiquitin fusion degradation protein 1 OS=Saccharomyces cerevisiae GN=UFD1 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.755e-48 Identity = 95/187 (50.80%), Postives = 128/187 (68.45%), Query Frame = 3 Query: 99 SFEQSYRCYPASF----IEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKP---SNAISIIETDCEVDFAPPLDYKEPE 638 +FE+ +RCYP + I K G KI +PPSAL +L+ L+I YPMLF+L N RV+H GVLEFIAEEG +Y+P WMME L +Q G ++++ + +P G +VKL+P + DFLDIS+PKA+LE LRN+S LT D I ++YN K + I I+E KP S +I +IETD DFAPP+ Y EP+ Sbjct: 20 TFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPESSSKSICVIETDLVTDFAPPVGYVEPD 206
BLAST of DR908167 vs. ExPASy Swiss-Prot
Match: UFD1_CAEEL (Ubiquitin fusion degradation protein 1 homolog OS=Caenorhabditis elegans GN=ufd-1 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.898e-41 Identity = 85/204 (41.67%), Postives = 127/204 (62.25%), Query Frame = 3 Query: 99 SFEQSYRCYPASFIEKP------QIESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPIASASSRATAKAEEAS 692 +++Q++ Y F+ +I G KI++P SAL+ L +I PMLF+L N A +RV+HCGVLEF A EG +P WMM+ L L +GD +R+++ TLPK T+ KL+P + +FL+I+NPKA+LE LR Y+CLT D I +Y + +++ KP+N++ IIE D +DF PP Y E + + A + A A +AS Sbjct: 20 NYDQTFVVYGPVFLPNATQSKISEINYGGKILLPSSALNLLMQYNIPMPMLFKLTNMAVQRVTHCGVLEFSAPEGQAILPLWMMQQLGLDDGDTIRIESATLPKATFAKLKPMSLEFLNITNPKAVLEVELRKYACLTKNDRIPTSYAGQTLEFLVVDLKPANSVCIIECDVNLDFDPPEGYVEQPRQVTPAVT-AKPPAPDAS 222 The following BLAST results are available for this feature:
BLAST of DR908167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908167 ID=DR908167; Name=DR908167; organism=Citrus sinensis; type=EST; length=705bpback to top |