DR908084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908084 vs. ExPASy Swiss-Prot
Match: FUCO1_ORYSJ (Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica GN=Os04g0560400 PE=3 SV=2) HSP 1 Score: 289.656 bits (740), Expect = 2.995e-86 Identity = 132/221 (59.73%), Postives = 159/221 (71.95%), Query Frame = 1 Query: 1 LDANQWVNTAAEAGVSLMILTAKHHDGFCLWPSKFTEHSVTHSPWKHGRGDVVQELVNAAKARGVDVGLYLSPWDRHDPRYGHDLQYNEYYLAQLQELLTRYGDVREIWFDGAKGSNAPNMSYYFTDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGSTCWSTINRTSLSIGNGSIVDYLSTGDAKGTDWLPAECDVSIRKGWFWHKSEHPRN*VSFL 663 LDA QW AA G ++LTAKHHDGFCLWPS T +SV SPWK G GDVV EL AA+A G+ +GLYLSPWDRH+P YG + YNE+YL Q+ ELLTRYGDV E+W DGAKG +M Y F WFA++ +LQ + IFSDAGPD RWVG+E G AG TCWS N+++++IG+ I +Y GD G DW+PAECDVSIR GWFWH SE P+N + L Sbjct: 83 LDAGQWARAAAAGGFGRVVLTAKHHDGFCLWPSALTNYSVAASPWKGGAGDVVGELAAAARAEGIGLGLYLSPWDRHEPVYGDTVAYNEHYLGQMTELLTRYGDVEEVWLDGAKG-EGKDMDYMFDAWFALIHQLQQRVVIFSDAGPDTRWVGDEAGVAGYTCWSPFNKSTVTIGH-IIPEYSRCGDPFGQDWVPAECDVSIRPGWFWHASEKPKNATTLL 301 HSP 2 Score: 50.8322 bits (120), Expect = 2.995e-86 Identity = 20/31 (64.52%), Postives = 27/31 (87.10%), Query Frame = 3 Query: 639 PKKLSELLEIYYNSVGRNCVMLLNVPPNTTG 731 PK + LL+IYY SVGRNC+++LNVPPN++G Sbjct: 294 PKNATTLLDIYYKSVGRNCLLILNVPPNSSG 324
BLAST of DR908084 vs. ExPASy Swiss-Prot
Match: FUCO1_ARATH (Alpha-L-fucosidase 1 OS=Arabidopsis thaliana GN=FUC1 PE=1 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.971e-78 Identity = 128/221 (57.92%), Postives = 165/221 (74.66%), Query Frame = 1 Query: 1 LDANQWVNTAAEAGVSLMILTAKHHDGFCLWPSKFTEHSVTHSPWKHGRGDVVQELVNAAKARGVDVGLYLSPWDRHDPRYGHDLQYNEYYLAQLQELLTRYGDVREIWFDGAKGSNAPNMSYYFTDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGSTCWSTINRTSLSIGNGSIVDYLSTGDAKGTDWLPAECDVSIRKGWFWHKSEHPRN*VSFL 663 L+A+QWV A ++G S +ILTAKHHDGFCLWPS++T++SV S W++G GDVV L +AAK G+ +GLYLSPWDRH+ YG L+YNE+YL+Q+ ELLT+YG+++E+W DGAKG +M Y+F WF+++ +LQ IFSDAGPDVRW+G+E G AGSTCWS NRT+ IG+ + Y GD G DW+PAECDVSIR GWFWH SE P+ V L Sbjct: 81 LNASQWVQIAKDSGFSRVILTAKHHDGFCLWPSEYTDYSVKSSQWRNGAGDVVAGLASAAKEAGIGLGLYLSPWDRHEQCYGKTLEYNEFYLSQMTELLTKYGEIKEVWLDGAKGDGEKDMEYFFDTWFSLIHQLQPKAVIFSDAGPDVRWIGDEAGLAGSTCWSLFNRTNAKIGD-TEPSYSQEGDGYGQDWVPAECDVSIRPGWFWHASESPKPAVQLL 300 The following BLAST results are available for this feature:
BLAST of DR908084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908084 ID=DR908084; Name=DR908084; organism=Citrus sinensis; type=EST; length=732bpback to top |