EY728858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: ACOR_RALEH (Acetoin catabolism regulatory protein OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoR PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 6.326e-27 Identity = 69/164 (42.07%), Postives = 92/164 (56.10%), Query Frame = -3 Query: 64 VEDGSFREDLYYRLNGLEIALPPLRERSDKSQLLDFLLAEETGD-QPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVI-----RQARPQPAVVEDRSDSPLD----DAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 525 V DG FREDLYYRLNG LPPLR R+D L+ LL E + + + L AR+ L WPGN+R+LR VL A+C DG I + DLP + A PQP + + +P D E + L+ L W++S A Q+GVSR TLYR++ ++GI Sbjct: 490 VADGRFREDLYYRLNGARFTLPPLRARTDLDWLVRKLLQEGSAEGSEITLSPAARERLHRHRWPGNLRELRNVLEYARAVCADGYIDVPDLPDSLAGPAPSAALPQPGPAQSPAAAPFDPHQLPPEGMLLMQYLRASGWNLSAVARQIGVSRMTLYRRMERYGI 653
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: PILR_PSEAE (Type 4 fimbriae expression regulatory protein pilR OS=Pseudomonas aeruginosa GN=pilR PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.179e-19 Identity = 57/160 (35.62%), Postives = 91/160 (56.88%), Query Frame = -3 Query: 64 GSFREDLYYRLNGLEIALPPLRERSDKSQLLD----FLLAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRI-----GLEDLPAVIRQARPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 516 G FR+DLYYRLN +E+ +PPLRER + LL LA +TG L A++ L + +PGNVR+L +L LC+D +I L D P ++ + +++ D L+D ER ++ ALE+ RW+ + A++LG++ ++ +L+K GI Sbjct: 286 GRFRQDLYYRLNVIELRVPPLRERREDIPLLAERILKRLAGDTGLPAARLTGDAQEKLKNYRFPGNVRELENMLERAYTLCEDDQIQPHDLRLADAPGASQEGAASLSEIDNLEDY-LEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGI 444
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: ANFA_AZOVI (Nitrogen fixation protein anfA OS=Azotobacter vinelandii GN=anfA PE=4 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.179e-19 Identity = 55/161 (34.16%), Postives = 86/161 (53.42%), Query Frame = -3 Query: 61 ERVEDGSFREDLYYRLNGLEIALPPLRER-SDKSQLLDFLLA---EETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGIA 531 E VE G+FREDLYYRLN I +PPLRER SD L D ++ E G + +PA L+++ WPGNVR+L V+ L DD I +LP ++ ++ + + E ++ AL+ H+ A++LG++R L ++ ++GI+ Sbjct: 365 EMVEQGTFREDLYYRLNVFPITVPPLRERGSDVIALADHFVSAFSRENGKNVKRISTPALNMLMSYHWPGNVRELENVMERAVILSDDDVIHSYNLPPSLQTSKESGTAFGLTLEEKIKAVECEMIVEALKNSSGHIGEAAKELGLARRMLGVRMERYGIS 525
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: ATOC_ECOLI (Acetoacetate metabolism regulatory protein atoC OS=Escherichia coli (strain K12) GN=atoC PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 6.341e-19 Identity = 60/164 (36.59%), Postives = 90/164 (54.88%), Query Frame = -3 Query: 64 VEDGSFREDLYYRLNGLEIALPPLRERSDKSQLL--DFL--LAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQ-----ARPQPAVVEDRS-DSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 525 V++G+FREDL+YRLN + + LPPLR+R + LL FL + E + +D A L A++WPGN+R+L V+ + I EDLP IRQ + A V +R+ + E+ ++ LEQQ + + TA LG+SR L KL+++GI Sbjct: 293 VKEGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNIRELSNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGEVKTAPVGERNLKEEIKRVEKRIIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGI 456
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: HOXA_RALEH (Hydrogenase transcriptional regulatory protein hoxA OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hoxA PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 1.845e-18 Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = -3 Query: 64 VEDGSFREDLYYRLNGLEIALPPLRERSDKSQLLDFLLAEETGDQ----PVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIG--------LEDLPAVIR-----QARPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 525 V G FREDLYYR+ G+ I++PPLRERS Q + L E+ + + A A++A+ WPGN+R+LR + AL I L P ++ Q PQ +++R LD E + L AL + RW+ +H A++LG+SR L +KL + G+ Sbjct: 313 VHAGRFREDLYYRIAGVTISMPPLRERSGDLQPIAAKLLEQVAQELARPGLYFGGDALAAMMAYPWPGNIRELRNEIYRAVALSSGEEIRAQLFSRKVLHGQPGTVKRGPHVQTFPQSGTLQER----LDAIEAVVLKEALLRHRWNKTHAAKELGLSRVGLRQKLLRFGL 479
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: NTRC_PROVU (Nitrogen regulation protein NR(I) OS=Proteus vulgaris GN=ntrC PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.368e-18 Identity = 65/184 (35.33%), Postives = 92/184 (50.00%), Query Frame = -3 Query: 64 ERVEDGSFREDLYYRLNGLEIALPPLRERS-DKSQLLDFLL---AEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVE--------------------DRSDSPLDDA----ERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 531 +RV +G FREDLY+RLN + I LPPLR+R+ D L + L A+E G + L + + ++ + W GNVRQL V R L + I +DLP+ IR A + + + ++ L+DA ER LL+AL + H A LG RNTL RKL++ GI Sbjct: 287 KRVNEGDFREDLYHRLNVIRIQLPPLRDRTEDIPSLARYFLQKTAKELGVETKSLHEQSLKTMMEYVWSGNVRQLENVCRWLTVMTASQEIMPQDLPSEIRLADEKAKNINRLTSQHWSQHLSLWADEALGEGKENILNDALPQFERTLLLSALAYTQGHKQDAARLLGWGRNTLTRKLKELGI 470
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: NIFA_AZOVI (Nif-specific regulatory protein OS=Azotobacter vinelandii GN=nifA PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.368e-18 Identity = 62/155 (40.00%), Postives = 87/155 (56.13%), Query Frame = -3 Query: 85 VEDGSFREDLYYRLNGLEIALPPLRER-SDKSQLLDFLLAEETGDQ--PVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRI--GLEDLPAVIRQARPQPAVVED--RSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVS-RNTLYR 525 VE G FREDLYYRLN + I +PPLRER +D +L +FLL + Q P+ + A + L++ WPGNVR+L L A + +DG I + L V ++ P A + + +D LDD ER ++ ALEQ W + A LG++ R YR Sbjct: 359 VEKGKFREDLYYRLNVMAIRIPPLRERTADIPELAEFLLGKIGRQQGRPLTVTDSAIRLLMSHRWPGNVRELENCLERSAIMSEDGTITRDVVSLTGVDNESPPLAAPLPEVNLADETLDDRER--VIAALEQAGWVQAKAARLLGMTPRQIAYR 511
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: NTRC_ECOLI (Nitrogen regulation protein NR(I) OS=Escherichia coli (strain K12) GN=glnG PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.040e-17 Identity = 61/183 (33.33%), Postives = 85/183 (46.45%), Query Frame = -3 Query: 64 ERVEDGSFREDLYYRLNGLEIALPPLRERSDKSQLL--DFL--LAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDS-----------------------PLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 531 +RV++G FREDL++RLN + + LPPLRER + L FL A E G + LL AL AWPGNVRQL R L + + ++DLP + ++ + + + DS + ER L AL + H A LG RNTL RKL++ G+ Sbjct: 286 QRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGM 468
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: NTRC_ECO57 (Nitrogen regulation protein NR(I) OS=Escherichia coli O157:H7 GN=glnG PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.040e-17 Identity = 61/183 (33.33%), Postives = 85/183 (46.45%), Query Frame = -3 Query: 64 ERVEDGSFREDLYYRLNGLEIALPPLRERSDKSQLL--DFL--LAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDS-----------------------PLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 531 +RV++G FREDL++RLN + + LPPLRER + L FL A E G + LL AL AWPGNVRQL R L + + ++DLP + ++ + + + DS + ER L AL + H A LG RNTL RKL++ G+ Sbjct: 286 QRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGM 468
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: NTRC_SALTY (Nitrogen regulation protein NR(I) OS=Salmonella typhimurium GN=glnG PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 7.751e-17 Identity = 63/182 (34.62%), Postives = 82/182 (45.05%), Query Frame = -3 Query: 64 RVEDGSFREDLYYRLNGLEIALPPLRERSDKSQLL--DFL--LAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDS-----------------------PLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 528 RV++G FREDL++RLN + I LPPLRER + L FL A E G + LL AL AWPGNVRQL R L + + ++DLP + +A + DS + ER L AL + H A LG RNTL RKL++ G+ Sbjct: 287 RVQEGKFREDLFHRLNVIRIHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETETALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFEASTPDSPSHLPPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGM 468 The following BLAST results are available for this feature:
BLAST of EY728858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728858 ID=EY728858; Name=EY728858; organism=Citrus sinensis; type=EST; length=533bpback to top |