DR405034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405034 vs. ExPASy Swiss-Prot
Match: CI041_MOUSE (UPF0586 protein C9orf41 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.426e-46 Identity = 86/181 (47.51%), Postives = 119/181 (65.75%), Query Frame = 1 Query: 52 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPACAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRI 591 D+DK++ ++ VRDW+ GK ERD CYKPI++E+ FP R S LVPGAGLGRLA E++ LG+ QGNE+S++M+ S+F+LN ++ +YPWIH N+ +DQ+RP+ PD+ P FSM GDF E+Y S+ AWD + TCFFIDTAHN+++YI+ I RI Sbjct: 145 DMDKLKSTLKQFVRDWSETGKAERDACYKPIIKEIIKNFPKERWDPSKVNILVPGAGLGRLAWEVAMLGYACQGNEWSFFMLFSSNFVLNRCSEINKYKLYPWIHQFSNNRRSADQIRPILFPDVDPHSLPPGSNFSMTAGDFQEIY---SECNAWDCIATCFFIDTAHNVIDYIDTIWRI 322
BLAST of DR405034 vs. ExPASy Swiss-Prot
Match: CI041_RAT (UPF0586 protein C9orf41 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 5.844e-46 Identity = 86/181 (47.51%), Postives = 118/181 (65.19%), Query Frame = 1 Query: 52 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPACAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRI 591 D+DK++ ++ VRDW+ GK ERD CYKPI++E+ FP R S LVPGAGLGRLA EI+ LG+ QGNE+S++M+ S+F+LN ++ +YPWIH N+ +DQ+RP+ PD+ P FSM GDF E+Y S+ WD + TCFFIDTAHN+++YI+ I RI Sbjct: 145 DMDKLKSTLKQFVRDWSGTGKAERDACYKPIIKEIIKNFPKERWDPSKVNILVPGAGLGRLAWEIAMLGYACQGNEWSFFMLFSSNFVLNRCSEVDKYKLYPWIHQFSNNRRSADQIRPIFFPDVDPHSLPPGSNFSMTAGDFQEIY---SECNTWDCIATCFFIDTAHNVIDYIDTIWRI 322
BLAST of DR405034 vs. ExPASy Swiss-Prot
Match: CI041_HUMAN (UPF0586 protein C9orf41 OS=Homo sapiens GN=C9orf41 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.461e-45 Identity = 84/181 (46.41%), Postives = 118/181 (65.19%), Query Frame = 1 Query: 52 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPACAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRI 591 D+DK++ ++ VRDW+ GK ERD CY+PI++E+ FP R S LVPGAGLGRLA EI+ LG+ QGNE+S++M+ S+F+LN ++ +YPWIH N+ +DQ+RP+ PD+ P FSM GDF E+Y S+ WD + TCFFIDTAHN+++YI+ I +I Sbjct: 154 DMDKLKSTLKQFVRDWSETGKAERDACYQPIIKEILKNFPKERWDPSKVNILVPGAGLGRLAWEIAMLGYACQGNEWSFFMLFSSNFVLNRCSEINKYKLYPWIHQFSNNRRSADQIRPIFFPDVDPHSLPPGSNFSMTAGDFQEIY---SECNTWDCIATCFFIDTAHNVIDYIDTIWKI 331
BLAST of DR405034 vs. ExPASy Swiss-Prot
Match: U586_DROME (UPF0586 protein CG11596 OS=Drosophila melanogaster GN=CG11596 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.056e-39 Identity = 79/186 (42.47%), Postives = 117/186 (62.90%), Query Frame = 1 Query: 37 NVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPA-CLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPACAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRI 591 NV D+D+ + ++ I RDW+ EG ER+Q YKPI++ + A F + E LVPGAGLGRL E++ LG+ +GNEFSY+M+I S+F+LN + ++ +YPW+H N+L DQ+ PV PD+ P F + GDF+EVY P+ A++ V TCFFID A+N++++I I +I Sbjct: 119 NVRHGDMDQAQSTLKLIARDWSTEGALEREQSYKPIIDSIVAYFKHSDFELKDIKILVPGAGLGRLTYELACLGYSCEGNEFSYFMLIASNFVLNLCDNENKYVLYPWVHQYVNNLRREDQVAPVRFPDVCPLKNPPKGHFEIAAGDFLEVYKTPN---AYNCVATCFFIDCANNVIDFIRTIYKI 301
BLAST of DR405034 vs. ExPASy Swiss-Prot
Match: YOI7_SCHPO (UPF0586 protein C1778.07 OS=Schizosaccharomyces pombe GN=SPBC1778.07 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.959e-37 Identity = 82/194 (42.27%), Postives = 119/194 (61.34%), Query Frame = 1 Query: 7 CDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKE-SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPA-CAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEII 582 C D + +V + + KV ++ I RDW+ E ER Y P +EEL++LFP+ S + S LVPG+GLGRLA +I+ GF QGNEFSY+M++ S FILN + ++ +YP+IHS N + DQ+R ++IPD P+ ++ FSM GDF+EVY ++ V TCFFIDT NI++Y++ I Sbjct: 85 CSDFDQNELFHVNVDMMQKVSSTLKQIARDWSTECVEERRTTYAPFIEELNSLFPSDSIDRSKIRVLVPGSGLGRLAFDIAVEGFACQGNEFSYFMLLTSHFILNCVKQENQFLVYPYIHSFSNHVMRDDQVRSLNIPDAVPSQYLRNSQNFSMAAGDFLEVYGTEESRDSFQVVATCFFIDTTKNILDYLDTI 278
BLAST of DR405034 vs. ExPASy Swiss-Prot
Match: U586_DICDI (UPF0586 protein OS=Dictyostelium discoideum GN=DDB_G0282239 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.482e-36 Identity = 84/190 (44.21%), Postives = 119/190 (62.63%), Query Frame = 1 Query: 55 VDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNR--SKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI---------HPACAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRI 591 +D+++ IR +VR+W+ EGK ERDQ ++PI ++L ++ + + S PGAGLGRL LEI+ LGF SQG E+S+ M+I S+F+LN E E+ I+P+IH N L D DQLR V+IPD+ +PA FSM GDF + + S +D + TCFFIDTA NI+EY++ IS+I Sbjct: 206 MDQLKSTIRQLVREWSEEGKLERDQAFEPIKQQLLEIYGHIPFQERSKIRVYSPGAGLGRLCLEIASLGFSSQGIEYSFMMLIVSNFMLNKVEKINEFKIHPYIHQTVNVLRDIDQLRTVTIPDVLSSELLPKNNPALE-----FSMSAGDFTKNIEENS----FDCICTCFFIDTAPNILEYVDCISKI 386
BLAST of DR405034 vs. ExPASy Swiss-Prot
Match: YNJ2_YEAST (UPF0586 protein YNL092W OS=Saccharomyces cerevisiae GN=YNL092W PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.549e-22 Identity = 63/201 (31.34%), Postives = 101/201 (50.25%), Query Frame = 1 Query: 52 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPACAGITEG-FSMCGGDFVEVY--------------------SDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRI 591 D+ K ++ + R+W+AE +ER+ ++ L L P ++ L+PG G GRL +++S +G+ +GNEFSY+M++ S ++LN + IYP+IH + DQL P+ +PDI + G S+C G FV+ Y S + D VVT FFIDT NI++Y++ I + Sbjct: 98 DMSKTCSLLTQVYREWSAEAISERNCLNSRLVPFLKTLSPPKAD-----ILIPGCGTGRLLVDLSRMGYNCEGNEFSYHMLLVSQYMLNAGLLQNQIIIYPFIHCFSHWKKIEDQLSPIKVPDIEAWSSNKGMGSMSICAGSFVDCYGRNQGTKISSHYTFSRRMQLSRAKAENSKDVVVTNFFIDTGSNILDYLDTIGHV 293 The following BLAST results are available for this feature:
BLAST of DR405034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR405034 ID=DR405034; Name=DR405034; organism=Citrus sinensis; type=EST; length=593bpback to top |