CX070149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070149 vs. ExPASy Swiss-Prot
Match: DBR1_ARATH (Lariat debranching enzyme OS=Arabidopsis thaliana GN=DBR1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.412e-36 Identity = 79/144 (54.86%), Postives = 99/144 (68.75%), Query Frame = -2 Query: 353 DSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESREPTQSPATL 784 D VTKFLALDKCLP +KFLQ+ EIES GP+E+ YDEEWLAITR FNS+FPLT + N + + R+WVR +L+ER KPFEF RTVP Y+ SQ + + E PQNPQT S L+ L LP L +++ + E T PA+L Sbjct: 240 DGSVTKFLALDKCLPGKKFLQIIEIESEPGPFEVLYDEEWLAITRKFNSIFPLTRRYTNV-STAGTIQESREWVRKKLEERQFKPFEFARTVPAYNPSQRV-FDSIPEIPQNPQTLSLLELLGLPYLLDSSPVTGERTDIPASL 381
BLAST of CX070149 vs. ExPASy Swiss-Prot
Match: DBR1_ORYSJ (Lariat debranching enzyme OS=Oryza sativa subsp. japonica GN=DBR1 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.012e-34 Identity = 75/129 (58.14%), Postives = 88/129 (68.22%), Query Frame = -2 Query: 392 PVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENA 778 P TKFLALDKCLPRR FLQV +I SG GP+EIQYDEEWLAITR FN+VF LT Q D D QWVR++L RGAKP +FV+T YD S S + + +NPQTESFLQ L LP L +++ Sbjct: 242 PTTKFLALDKCLPRRGFLQVIDIPSGPGPHEIQYDEEWLAITRKFNNVFSLTRMPFTMLDEQVDTQDDLQWVRNKLNARGAKPIDFVQTAASYDPSCQASNPSITVHCRNPQTESFLQLLNLPYLLDSS 370
BLAST of CX070149 vs. ExPASy Swiss-Prot
Match: DBR1_DROME (Lariat debranching enzyme OS=Drosophila melanogaster GN=ldbr PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.217e-12 Identity = 50/136 (36.76%), Postives = 72/136 (52.94%), Query Frame = -2 Query: 431 PVTKFLALDKCLPRRKFLQVFEIESG--QGPYEIQYDEEWLAITRTFNSVFPLT--------------SQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYD-ASQSLSIGAFAENPQ---NPQTESF 778 PVTKFLALDKCLPRR FLQV E+ S +G ++YD EWLAI + N + + ++ +NF + ++ + V ++ Q+ P F RTVP +D A QS F + P+ NPQ+ +F Sbjct: 279 PVTKFLALDKCLPRRAFLQVVEVPSDPIEGTPRLEYDAEWLAILHSTNHLISVKENYYYLPGKKAGEFTERSNFTPTEEEL----EAVTAKFQKLQV-PENFERTVPAFDPAEQSDYKHMFVDQPKVQLNPQSNTF 409 The following BLAST results are available for this feature:
BLAST of CX070149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070149 ID=CX070149; Name=CX070149; organism=Citrus sinensis; type=EST; length=785bpback to top |