CX070143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070143 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.778e-26 Identity = 56/80 (70.00%), Postives = 69/80 (86.25%), Query Frame = -1 Query: 1 NANKAKMWEEEQDT---GGMDELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSM 231 ++ K+K+WEE+++ GMDELL VLGYKV+SS+MADVAQKLEQLEM MGT EDGI+HL+TDTVH NPSD++GWVQSM Sbjct: 22 SSGKSKIWEEDEEEKPDAGMDELLAVLGYKVKSSDMADVAQKLEQLEMAMGTTMEDGITHLSTDTVHKNPSDMAGWVQSM 101
BLAST of CX070143 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.064e-25 Identity = 64/103 (62.14%), Postives = 73/103 (70.87%), Query Frame = -1 Query: 1 MKRDHQHXXXXXXXXXXXXXXXSTGNANKAKMWEEEQDTGGMD-ELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSM 306 MKRDHQ ++ K K+WEE+ D GGMD ELL VLGYKVRSS+MADVAQKLE LE VMGTAQEDGIS L DTVH+NPSD+SGWVQ++ Sbjct: 1 MKRDHQEISGSGSNPAE-------SSSIKGKLWEEDPDAGGMDDELLAVLGYKVRSSDMADVAQKLEMLEKVMGTAQEDGISQLG-DTVHFNPSDLSGWVQNL 95
BLAST of CX070143 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.472e-24 Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = -1 Query: 1 NANKAKMWEEE-QDTGGMDELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSM 231 N KAK+WEEE Q GGMDELL VLGYKV+SS+MA+VAQKLEQLE M Q+ G+SHLA DTVHYNPSD+S WV+SM Sbjct: 28 NTGKAKLWEEEVQLDGGMDELLAVLGYKVKSSDMAEVAQKLEQLEEAMCQVQDTGLSHLAFDTVHYNPSDLSTWVESM 105
BLAST of CX070143 vs. ExPASy Swiss-Prot
Match: RGA2_BRACM (DELLA protein RGA2 OS=Brassica campestris GN=RGA2 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.699e-23 Identity = 58/104 (55.77%), Postives = 72/104 (69.23%), Query Frame = -1 Query: 1 MKRDHQHXXXXXXXXXXXXXXXSTGNANKAKMW--EEEQDTGGMDELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSM 306 MKRD +TG+++K KM +EE+D G MDELL VLGYKVRSSEMA+VA KLEQLE +MG QEDG+S+LATDTVHYNPS++ W+ +M Sbjct: 1 MKRDLHQFQGPPDTRFPNHGTANTGSSSKDKMMMVKEEEDGGNMDELLAVLGYKVRSSEMAEVALKLEQLETMMGNVQEDGLSNLATDTVHYNPSELYSWLDNM 104
BLAST of CX070143 vs. ExPASy Swiss-Prot
Match: GAIPB_CUCMA (DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.699e-23 Identity = 59/105 (56.19%), Postives = 70/105 (66.67%), Query Frame = -1 Query: 1 MKRDHQHXXXXXXXXXXXXXXXSTG--NANKAKMWEEE-QDTGGMDELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSM 306 MKR+H H N KAK+WEE+ Q GGMDELL VLGYKV+SS+MA+VAQKLEQLE M Q+ G+SHLA DTVHYNPSD+S W++SM Sbjct: 1 MKREHHHLHPRPDPPSMAAAPNGDTYLNTGKAKLWEEDAQLDGGMDELLAVLGYKVKSSDMAEVAQKLEQLEEAMCQVQDTGLSHLAFDTVHYNPSDLSTWLESM 105
BLAST of CX070143 vs. ExPASy Swiss-Prot
Match: GAI_ARATH (DELLA protein GAI OS=Arabidopsis thaliana GN=GAI PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.205e-22 Identity = 56/102 (54.90%), Postives = 64/102 (62.75%), Query Frame = -1 Query: 1 MKRDHQHXXXXXXXXXXXXXXXSTGNANKAKMWEEEQDTGGMDELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSM 306 MKRDH H K M EE D GMDELL VLGYKVRSSEMADVAQKLEQLE++M QED +S LAT+TVHYNP+++ W+ SM Sbjct: 1 MKRDHHHHHHQD---------------KKTMMMNEEDDGNGMDELLAVLGYKVRSSEMADVAQKLEQLEVMMSNVQEDDLSQLATETVHYNPAELYTWLDSM 87
BLAST of CX070143 vs. ExPASy Swiss-Prot
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.186e-22 Identity = 51/80 (63.75%), Postives = 63/80 (78.75%), Query Frame = -1 Query: 1 TGNANKAKMWEEE-QDTGGMDELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSM 237 T K KMW+ + Q GMDELL VLGY V++S+MA+VAQKLEQLE V+ AQEDG+SHLA++TVHYNPSD+S W+ SM Sbjct: 15 TSPTGKGKMWDADPQQDAGMDELLAVLGYNVKASDMAEVAQKLEQLEEVIVNAQEDGLSHLASETVHYNPSDLSNWLGSM 94
BLAST of CX070143 vs. ExPASy Swiss-Prot
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.544e-21 Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = -1 Query: 1 MKRDHQHXXXXXXXXXXXXXXXSTGNANKAKMWEEEQDTGGM--DELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSM 306 MKRDH H S+ + +K M ++E+D GG DELL VLGYKVRSSEMA+VA KLEQLE +M QEDG+SHLATDTVHYNPS++ W+ +M Sbjct: 1 MKRDH-HQFQGRLSNHGTSSSSSSISKDKMMMVKKEEDGGGNMDDELLAVLGYKVRSSEMAEVALKLEQLETMMSNVQEDGLSHLATDTVHYNPSELYSWLDNM 103
BLAST of CX070143 vs. ExPASy Swiss-Prot
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.918e-20 Identity = 49/75 (65.33%), Postives = 61/75 (81.33%), Query Frame = -1 Query: 1 NKAKMWEEEQDTGGMDELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSM 225 +K M +EE+D DELL VLGYKVRSSEMA+VA KLEQLE +MG AQEDG++HLATDTVHYNP+++ W+ +M Sbjct: 31 DKMMMVKEEED----DELLGVLGYKVRSSEMAEVALKLEQLETMMGNAQEDGLAHLATDTVHYNPAELYSWLDNM 101
BLAST of CX070143 vs. ExPASy Swiss-Prot
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.728e-20 Identity = 55/102 (53.92%), Postives = 69/102 (67.65%), Query Frame = -1 Query: 1 MKRDHQHXXXXXXXXXXXXXXXSTGNANKAKMWEEEQDTGGMDELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSM 306 MKR+H H G+++ + +EE G+DELL VLGYKVRSS+MADVA KLEQLEMV+G DGIS+L+ +TVHYNPSD+SGWV+SM Sbjct: 1 MKREHNHRESSAGEG---------GSSSMTTVIKEE--AAGVDELLVVLGYKVRSSDMADVAHKLEQLEMVLG----DGISNLSDETVHYNPSDLSGWVESM 87 The following BLAST results are available for this feature:
BLAST of CX070143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070143 ID=CX070143; Name=CX070143; organism=Citrus sinensis; type=EST; length=756bpback to top |