CX070033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070033 vs. ExPASy Swiss-Prot
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.570e-32 Identity = 71/87 (81.61%), Postives = 74/87 (85.06%), Query Frame = 1 Query: 1 FDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETKK 261 FDD TRE+P GHCLVAGIKK P KVI KDSAKKTAK SRVKAFVKLV+YQHLMPTRYTLDVDLK V D LQSKDKK+ A KETKK Sbjct: 29 FDDGTREKPYGHCLVAGIKKFPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKK 115
BLAST of CX070033 vs. ExPASy Swiss-Prot
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 3.868e-31 Identity = 66/86 (76.74%), Postives = 72/86 (83.72%), Query Frame = 1 Query: 1 FDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETK 258 FDD R+RP GHCLVAG+KK P KVI KDSAKKTAK SRVK F+KLV+YQHLMPTRYTLDVDLK V T D+LQSKDKK+ A KE K Sbjct: 29 FDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAK 114
BLAST of CX070033 vs. ExPASy Swiss-Prot
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 1.625e-29 Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 1 Query: 1 FDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETK 258 FDD T +R GHCLVAG+KK P KVI KDSAKKTAK SRVK F+KLV+YQHLMPTRYTLDVDLK V T D+L+SKDKK+ A KE K Sbjct: 29 FDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAK 114
BLAST of CX070033 vs. ExPASy Swiss-Prot
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.828e-28 Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = 1 Query: 1 FDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETK 258 FDD T E+ GHCLVAG+KK P KVI KDSAKKTAK SRVK F K+++YQH+MPTRYTLD+DLK VV+AD++ SKDKK+ A KE K Sbjct: 29 FDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAK 114
BLAST of CX070033 vs. ExPASy Swiss-Prot
Match: RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum GN=RPL27 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.507e-24 Identity = 57/85 (67.06%), Postives = 66/85 (77.65%), Query Frame = 1 Query: 1 FDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDL----KVVVTADSLQSKDKKMIA 243 FD+ TR+RP GHCLVAGI + P KVI KDSAKK K SRVKAF+KLV+Y H+MPTRYTLD DL K VV AD LQ++DKK+ A Sbjct: 29 FDEGTRDRPYGHCLVAGISRYPKKVIRKDSAKKAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTA 113
BLAST of CX070033 vs. ExPASy Swiss-Prot
Match: RL27_PYRST (60S ribosomal protein L27 OS=Pyrobotrys stellata GN=RPL27 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.904e-18 Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 1 FDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETKK 261 FDD T RP GH LV G++K P KV + S KK AK S +K F+K V+Y HLMPTRYTLDVD K V A++ ++ KK+ A KE KK Sbjct: 29 FDDGTSSRPYGHALVVGLQKEPRKVTKRQSQKKQAKKSTLKTFIKTVNYNHLMPTRYTLDVDFK-GVAAEAQENPTKKVEARKECKK 114
BLAST of CX070033 vs. ExPASy Swiss-Prot
Match: RL27B_YEAST (60S ribosomal protein L27-B OS=Saccharomyces cerevisiae GN=RPL27B PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.975e-15 Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 4 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVD-LKVVVTADSLQSKDKKMIACKETKK 261 D+ ++ P GH LVAGI++ P KV K AKK AK +++K F+K+V+Y HL+PTRYTLDV+ K VV+ ++ + ++ A K KK Sbjct: 30 DEGSKSHPFGHALVAGIERYPSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKK 116
BLAST of CX070033 vs. ExPASy Swiss-Prot
Match: RL27A_YEAST (60S ribosomal protein L27-A OS=Saccharomyces cerevisiae GN=RPL27A PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.657e-15 Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 4 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVD-LKVVVTADSLQSKDKKMIACKETKK 261 D+ ++ P GH LVAGI++ P KV K AKK AK +++K F+K+V+Y HL+PTRYTLDV+ K VV+ ++ + ++ A K KK Sbjct: 30 DEGSKSHPFGHALVAGIERYPLKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKK 116
BLAST of CX070033 vs. ExPASy Swiss-Prot
Match: RL27_CANAL (60S ribosomal protein L27 OS=Candida albicans GN=RPL27 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.929e-14 Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 4 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVD-LKVVVTADSLQSKDKKMIACKETKK 261 D+ T+ P H +VAGI++ P KV K AKK K ++VK FVKLV+Y HLMPTRY+LDV+ K VT+++L+ ++ A K KK Sbjct: 30 DEGTKSHPFPHAIVAGIERAPLKVTKKMDAKKVTKRTKVKPFVKLVNYNHLMPTRYSLDVESFKSAVTSEALEEPSQREEAKKVVKK 116
BLAST of CX070033 vs. ExPASy Swiss-Prot
Match: RL27A_SCHPO (60S ribosomal protein L27-A OS=Schizosaccharomyces pombe GN=rpl27a PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 3.290e-14 Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 4 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVD-LKVVVTADSLQSKDKKMIACKETKK 261 D ++ P GH +VAG+++ P KV AK+ A+ SRVK F+K+V+Y HLMPTRY L++D LK ++TAD+ + ++ A K KK Sbjct: 30 DQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKK 116 The following BLAST results are available for this feature:
BLAST of CX070033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070033 ID=CX070033; Name=CX070033; organism=Citrus sinensis; type=EST; length=262bpback to top |