DR403912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 2.232e-104 Identity = 174/190 (91.58%), Postives = 183/190 (96.32%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQSP+FIA+TFM QGGIPP+TNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRP FKGSAPINLSDRLNQVLRWALG +EILLSRHCPIWYGYNGRLKLLERLAYINTIVYP+TS+PLIAYC LPA CLLTNKFIIPEISN+A M+FILLF SIFATGILE+RW Sbjct: 718 GQSPIFIASTFMTQGGIPPSTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRW 907 HSP 2 Score: 26.9498 bits (58), Expect = 2.232e-104 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ EDWWRNEQ Sbjct: 909 GVGIEDWWRNEQ 920
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 2.232e-104 Identity = 174/190 (91.58%), Postives = 183/190 (96.32%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQSP+FIA+TFM QGGIPP+TNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRP FKGSAPINLSDRLNQVLRWALG +EILLSRHCPIWYGYNGRLKLLERLAYINTIVYP+TS+PLIAYC LPA CLLTNKFIIPEISN+A M+FILLF SIFATGILE+RW Sbjct: 718 GQSPIFIASTFMTQGGIPPSTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRW 907 HSP 2 Score: 26.9498 bits (58), Expect = 2.232e-104 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ EDWWRNEQ Sbjct: 909 GVGIEDWWRNEQ 920
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 372.474 bits (955), Expect = 3.800e-104 Identity = 173/190 (91.05%), Postives = 185/190 (97.37%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQSPVFIAATFMEQGGIPPTTNPA+LLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYC PPRPAFKGSAPINLSDRLNQVLRWALG IEILLSRHCPIWYGY+GRL+LLER+AYINTIVYP+TS+PLIAYC LPAFCL+T++FIIPEISN+AS+WFILLFISI TGILE+RW Sbjct: 723 GQSPVFIAATFMEQGGIPPTTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRW 912 HSP 2 Score: 27.335 bits (59), Expect = 3.800e-104 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ EDWWRNEQ Sbjct: 914 GVSIEDWWRNEQ 925
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 6.554e-98 Identity = 164/190 (86.32%), Postives = 179/190 (94.21%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQSPVFIAATFMEQGG+P TTNP +LLKEAIHVISCGYE KT+WGKEIGWIYGSVTEDILTGFKMHARGWISIYC+P RPAFKGSAPINLSDRLNQVLRWALG IEILLSRHCPIWYGYNGRLKLLER+AYINTIVYP+TS+PL+AYC LPAFCL+TN FIIPEISN AS+ F+LLF SI+A+ ILE++W Sbjct: 710 GQSPVFIAATFMEQGGLPSTTNPLTLLKEAIHVISCGYEAKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILELKW 899 HSP 2 Score: 25.7942 bits (55), Expect = 6.554e-98 Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 1 Query: 583 LVFEDWWRNEQ 615 + EDWWRNEQ Sbjct: 902 VALEDWWRNEQ 912
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 7.211e-94 Identity = 158/190 (83.16%), Postives = 168/190 (88.42%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQS F+A+T ME GG+P + P SLLKEAIHVISCGYEDKTEWG EIGWIYGSVTEDILTGFKMHARGW SIYCMP RPAFKGSAPINLSDRLNQVLRWALG +EIL SRHCPIWYGY GRLK LER AYINT +YPLTS+PL+ YC LPA CLLT KFIIPEISNFAS+WFI LFISIFATGILE+RW Sbjct: 724 GQSAAFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLFISIFATGILEMRW 913 HSP 2 Score: 24.2534 bits (51), Expect = 7.211e-94 Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ ++WWRNEQ Sbjct: 915 GVGIDEWWRNEQ 926
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 3.554e-93 Identity = 156/190 (82.11%), Postives = 169/190 (88.95%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQS VF+A+T ME GG+P + P SLLKEAIHVISCGYEDK++WG EIGWIYGSVTEDILTGFKMHARGW SIYCMP RPAFKGSAPINLSDRLNQVLRWALG +EIL SRHCPIWYGY GRLK LER AYINT +YPLTS+PL+ YC LPA CLLT KFIIPEISNFAS+WFI LF+SIFATGILE+RW Sbjct: 716 GQSSVFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRW 905 HSP 2 Score: 24.2534 bits (51), Expect = 3.554e-93 Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ ++WWRNEQ Sbjct: 907 GVGIDEWWRNEQ 918
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 3.554e-93 Identity = 156/190 (82.11%), Postives = 169/190 (88.95%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQS VF+A+T ME GG+P + P SLLKEAIHVISCGYEDK++WG EIGWIYGSVTEDILTGFKMHARGW SIYCMP RPAFKGSAPINLSDRLNQVLRWALG +EIL SRHCPIWYGY GRLK LER AYINT +YPLTS+PL+ YC LPA CLLT KFIIPEISNFAS+WFI LF+SIFATGILE+RW Sbjct: 716 GQSSVFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRW 905 HSP 2 Score: 24.2534 bits (51), Expect = 3.554e-93 Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ ++WWRNEQ Sbjct: 907 GVGIDEWWRNEQ 918
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 336.65 bits (862), Expect = 1.752e-92 Identity = 151/190 (79.47%), Postives = 170/190 (89.47%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQS VF+A+T ME GG+PP+ P +LLKEAIHVISCGYEDK++WG EIGWIYGSVTEDILTGFKMHARGW SIYCMP PAFKGSAPINLSDRLNQVLRWALG +EIL SRHCPIWYGYNGRLK LER AY+NT +YP+TS+PL+ YCTLPA CL TN+FIIP+ISN AS+WF+ LF+SIFATGILE+RW Sbjct: 708 GQSAVFVASTLMENGGVPPSATPENLLKEAIHVISCGYEDKSDWGMEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPITSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRW 897 HSP 2 Score: 24.2534 bits (51), Expect = 1.752e-92 Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ ++WWRNEQ Sbjct: 899 GVGIDEWWRNEQ 910
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 5.437e-90 Identity = 148/190 (77.89%), Postives = 169/190 (88.95%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 G SPVFIA+T ME GG+P TN +SL+KEAIHVISCGYE+KTEWGKEIGWIYGSVTEDILTGF+MH RGW S+YCMP RPAFKGSAPINLSDRL+QVLRWALG +EI SRHCP+WY + G+LK+LERLAYINTIVYP TS+PL+AYCT+PA CLLT KFIIP I+NFAS+WF+ LF+SI AT ILE+RW Sbjct: 691 GMSPVFIASTLMENGGLPEATNTSSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRW 880
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 4.270e-88 Identity = 145/192 (75.52%), Postives = 166/192 (86.46%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPP--TTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQSPVFIA+T +E GG+P +PA+L+KEAIHVISCGYE+KTEWGKEIGWIYGSVTEDILTGFKMH RGW S+YC P R AFKGSAPINLSDRL+QVLRWALG +EI +SRHCP+WY Y GRLK LER AY NTIVYP TS+PL+AYCT+PA CLLT KFIIP ++N AS+WFI LF+SI ATG+LE+RW Sbjct: 703 GQSPVFIASTLVEDGGLPQGAAADPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCTPARAAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGRLKWLERFAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSIIATGVLELRW 894 HSP 2 Score: 27.335 bits (59), Expect = 4.270e-88 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ EDWWRNEQ Sbjct: 896 GVSIEDWWRNEQ 907 The following BLAST results are available for this feature:
BLAST of DR403912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403912 ID=DR403912; Name=DR403912; organism=Citrus sinensis; type=EST; length=617bpback to top |