CX069546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_CITSI (Putative membrane protein ycf1 OS=Citrus sinensis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 556.599 bits (1433), Expect = 6.182e-158 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = -1 Query: 2 GKKEADLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 835 GKKEADLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL Sbjct: 1499 GKKEADLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 1776
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_GOSHI (Putative membrane protein ycf1 OS=Gossypium hirsutum GN=ycf1 PE=3 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 1.837e-85 Identity = 163/276 (59.06%), Postives = 203/276 (73.55%), Query Frame = -1 Query: 2 KEADLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 829 K+ D I+P +K+ L N+++EE E +G SDAQKQ SVLSNQEKD EE+Y SD K R KKKQ K TE +LDFFLKRYL QLRW S ++I+N+++VYC L+RLINP+++ I+SIQRGEM+L IL+ +K L+EL K G+LII+P RLSVKNDGQF LYQ + I LVHKNK +I +RYQEK Y+DK F EFIA+HQKMT N++KNHYDL VPE IL P RRELR I FNS+++NGM +N VF NN K G+VL KNK+L Sbjct: 1566 KKRDSLIAPNEKQIIGLENRNQEEKEPIGEGGLVSDAQKQGNFKSVLSNQEKDVEEDYDKSDKKKRRKKKQYKSNTEAELDFFLKRYLRFQLRWDD--SLNQRIINNIKVYCLLLRLINPNEIVISSIQRGEMNLDILMIQKDLTLRELMKKGILIIDPVRLSVKNDGQFILYQTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVLTKNKHL 1839
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_GOSBA (Putative membrane protein ycf1 OS=Gossypium barbadense GN=ycf1 PE=3 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 1.837e-85 Identity = 163/276 (59.06%), Postives = 203/276 (73.55%), Query Frame = -1 Query: 2 KEADLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 829 K+ D I+P +K+ L N+++EE E +G SDAQKQ SVLSNQEKD EE+Y SD K R KKKQ K TE +LDFFLKRYL QLRW S ++I+N+++VYC L+RLINP+++ I+SIQRGEM+L IL+ +K L+EL K G+LII+P RLSVKNDGQF LYQ + I LVHKNK +I +RYQEK Y+DK F EFIA+HQKMT N++KNHYDL VPE IL P RRELR I FNS+++NGM +N VF NN K G+VL KNK+L Sbjct: 1563 KKRDSLIAPNEKQIIGLENRNQEEKEPIGEGGLVSDAQKQGNFKSVLSNQEKDVEEDYDKSDKKKRRKKKQYKSNTEAELDFFLKRYLRFQLRWDD--SLNQRIINNIKVYCLLLRLINPNEIVISSIQRGEMNLDILMIQKDLTLRELMKKGILIIDPVRLSVKNDGQFILYQTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVLTKNKHL 1836
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_EUCGG (Putative membrane protein ycf1 OS=Eucalyptus globulus subsp. globulus GN=ycf1 PE=3 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 5.722e-79 Identity = 156/277 (56.32%), Postives = 198/277 (71.48%), Query Frame = -1 Query: 5 KKEADLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLL-VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKN 832 K + DLF+ +K+ EL N+++EE E A + SDAQ Q LGS+ SNQEKD E+Y SDMK R KKK+ K TEV+L FFLKRYL +QLRW S ++++N++++YC L+RLINP ++AI+SIQRGEMSL ILIT+K L EL K G+LIIEP RLS+KNDGQ +YQ + I+L HK+K KI + Y+EK YV K + D+ IA+H KM NR KN YDLL VPE +L KRRRELR ICFNS+ +NG+ KNPVF NN K G LDK K+ Sbjct: 1551 KNKRDLFLFSNEKKSIELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRRKKKEYKSNTEVELYFFLKRYLRIQLRWDD--SLNQRMINNIKIYCLLLRLINPREIAISSIQRGEMSLDILITQKDLTLTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYREKSYVAKINLDKSIARHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRIRICFNSRKRNGIHKNPVFCNNVKNWGEFLDKRKH 1825
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_VITVI (Putative membrane protein ycf1 OS=Vitis vinifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 4.101e-77 Identity = 153/281 (54.45%), Postives = 202/281 (71.89%), Query Frame = -1 Query: 2 KKEADLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSD--MKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTK--GGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 832 K++ +LFIS +K+ +L N+++EE E A Q SD Q Q L SVLSN EKD EE+Y GSD M+ R KKKQ K TE +LD FLKRYL QLRW S +K++N+++VYC L+RLINP ++ I++IQRGEMSL ++ K L EL K G+ IIEP RLSVKNDGQF +YQ +GI+LVHK+K + +RY+E+ YVD K+ D+F A+ QKM GN++KNHYDLLVPE IL P+RRR+ R LICFN +N++G+ +NPVF NG + LD+NK+L Sbjct: 1560 KQKGNLFISSNEKKLLKLENRNQEEKESAGQVDLGSDVQNQGNLESVLSNHEKDIEEDYAGSDSDMQKRTKKKQFKNHTEAELDLFLKRYLLFQLRWDD--SLNQKMINNIKVYCLLLRLINPREICISAIQRGEMSLDLIPVHKDLTLTELMKMKRGIFIIEPIRLSVKNDGQFIMYQTIGISLVHKSKYQTNQRYREERYVDNKNCDKFSARCQKMIGNKDKNHYDLLVPENILSPRRRRKFRILICFNLRNRSGVARNPVFC-NGNSCNKFLDENKHL 1837
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_BUXMI (Putative membrane protein ycf1 OS=Buxus microphylla GN=ycf1-A PE=3 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 2.035e-76 Identity = 151/279 (54.12%), Postives = 199/279 (71.33%), Query Frame = -1 Query: 2 KKEADLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNG--KGGGRVLDKNKNL 832 K++ DL+I T+K+ EL N+++EE E QG SDAQ LG VLSNQ+KD EE+Y GS++K R KKKQ TE +L+F LKRYL QLRW F ++++N+++VYC L+RLINP +++I+SIQ GEMS I+ +K + EL K G+LIIEP RLS+K DGQF +YQ + I+LVHKNK++ R +EK YVDK FDE IA+H+KM G ++NHY+LLVPE I P+RRRELR ICFNS N+N + +NPVFFN K GR LD+NK+L Sbjct: 1532 KQKNDLWIPFTEKKSIELENRNQEEKETRGQGDLGSDAQNHGNLGYVLSNQQKDVEEDYAGSNIKKRRKKKQCTSNTEAELNFLLKRYLLFQLRWDDP--FNQRMINNIKVYCLLLRLINPKEISISSIQSGEMSPDII--QKDLTITELIKKGLLIIEPVRLSIKRDGQFIMYQTISISLVHKNKQQTNGRCREKRYVDKNYFDESIARHEKMVGTGDENHYELLVPENISSPRRRRELRIRICFNSGNKNFVDRNPVFFNENKVKHCGRFLDENKHL 1806
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_MORIN (Putative membrane protein ycf1 OS=Morus indica GN=ycf1 PE=3 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 9.454e-74 Identity = 150/278 (53.96%), Postives = 194/278 (69.78%), Query Frame = -1 Query: 8 GKKEADLFIS--PTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNK 835 GKK+ D+FIS +K+Y EL Q++ E E ++D + S LSNQEKD EENY S MK KKQS+ E + DF LKRYL QLRW S +K++++++VYC L+R IN ++ IASIQRGE++L +L+ +K F L EL K G+L+IEP RLS KN+GQF +YQ +GI+LVHK+K I +RY+EKG VD K+FDEFI+KHQKMT NR+KNHYDL VPETIL P+ RRELR LICFNS+N+NG+ N F N K VL+K+K Sbjct: 1542 GKKKRDIFISIFSNEKKYLELEKQNQVEKEYGI----KTDFE------STLSNQEKDIEENYAVSKMKKN--KKQSRTNMEAEFDFLLKRYLLFQLRWDD--SLNKKMIDNIKVYCSLLRPINLREITIASIQRGEINLDLLMIQKNFILTELIKKGILLIEPVRLSRKNEGQFIMYQTIGISLVHKSKHTINQRYREKGLVDTKNFDEFISKHQKMTENRDKNHYDLFVPETILSPRHRRELRILICFNSRNRNGIPSNAFFCNENKVKSPVLNKSK 1805
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_CALFG (Putative membrane protein ycf1 OS=Calycanthus floridus var. glaucus GN=ycf1 PE=3 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 3.041e-72 Identity = 146/280 (52.14%), Postives = 195/280 (69.64%), Query Frame = -1 Query: 2 GKKEADLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 835 G K+ +L IS QK+Y EL N+++EE E QG SD Q NQ+KD E++Y SD+K R KK+QSK +L FFLKRYL QLRW ++ ++++N+++VYC L+RLINP ++AI+SIQRGEM L +++ +K L EL K G+LIIEP RLS+K DGQF +YQ +GI+LVHKNK + +RY+EK YVD+ FD IA+H KM NR +N YDLLVPE IL P+RRRELR LI FNS N+N + +N VFF NN K G+ LD++K++ Sbjct: 1507 GNKKGELPISSNQKDYLELENRNQEEKEEFGQGNLGSDTQ----------NQQKDVEKDYAKSDIKKRGKKRQSKSNKGAELQFFLKRYLLFQLRWDDPLN--QRMMNNVKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTELIKRGILIIEPVRLSIKWDGQFIMYQTIGISLVHKNKHQTNRRYREKRYVDENYFDGSIAQHGKMLVNRAENDYDLLVPENILSPRRRRELRILISFNSGNRNVVDRNLVFFNGNNVKNFGQFLDEDKHI 1774
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_PLAOC (Putative membrane protein ycf1 OS=Platanus occidentalis GN=ycf1 PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.972e-72 Identity = 144/289 (49.83%), Postives = 197/289 (68.17%), Query Frame = -1 Query: 2 KKEADLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILG----------SVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 832 KK L + +K+ EL N+++EE E + QG S+AQ Q LG SVL NQ+K+ EE+Y GSD+K KKKQ K + EV+LD LK+YL QLRW G S ++ILN++++YC L+RLINP ++ I+SIQ+GEMSL I++ K+ EL K G+ IIEP RLS+K DGQF +YQ +GI+LVHK+K + +RY+EK +DK F+ FIA+H+ M GN ++NHYDLLVPE I P+RRRELR L CF+ N N + +NPVF NN K G+ L+++K+L Sbjct: 1574 KKNLPLSSNKNKKKSLELENRNQEEKESSSQGDLGSNAQNQGNLGPNAQNQGNLGSVLPNQQKNLEEDYAGSDIKKVRKKKQFKSKAEVELDLLLKKYLLFQLRWNG--SLNQRILNNIKIYCFLLRLINPKEITISSIQKGEMSLGIMLIKRDLTFTELIKRGIFIIEPVRLSIKWDGQFIMYQTIGISLVHKSKHQTNQRYREKRCIDKNHFEGFIARHENMLGNGDENHYDLLVPENISSPRRRRELRILTCFHFLNGNVLDRNPVFCNGNNVKNCGQFLNEDKHL 1860
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_DRIGR (Putative membrane protein ycf1 OS=Drimys granadensis GN=ycf1 PE=3 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 8.849e-72 Identity = 141/280 (50.36%), Postives = 194/280 (69.29%), Query Frame = -1 Query: 2 GKKEADLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 835 G ++ DL IS QKEY EL N++KE+ E QG RSDA+ Q L S N++K E++Y SD+K R KK++ K E +L+FFLKRYL QLRW S ++++N+++VYC L+RLINP ++AI+SIQRGEM L +++ K L EL K G+ IIEP RLS+K DGQF +YQ +GI+L+HK+K + + +EK YVD+ FD IA+H KM N ++NHYDLL+ E IL P+RRR LR L+CFNS N+N + NP+FF NN + G+ LD++K L Sbjct: 1528 GNQKKDLRISSNQKEYLELENRNKEK-EQPGQGDIRSDARNQENLESDAQNKKKYVEKDYAESDIKKRRKKRKYKSNKEAELEFFLKRYLLFQLRWDD--SLNQRMINNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIHKDLTLTELIKRGIFIIEPARLSIKRDGQFIMYQTIGISLIHKSKHQTNRECREKKYVDENSFDGSIAQHGKMLVNGDENHYDLLISENILSPRRRRNLRILMCFNSSNENIVDINPIFFNENNVRNSGQFLDEDKCL 1804 The following BLAST results are available for this feature:
BLAST of CX069546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069546 ID=CX069546; Name=CX069546; organism=Citrus sinensis; type=EST; length=835bpback to top |