DR403314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403314 vs. ExPASy Swiss-Prot
Match: RNF5_CAEEL (RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.384e-28 Identity = 73/189 (38.62%), Postives = 96/189 (50.79%), Query Frame = 1 Query: 109 TSRSAQNPYSNNNSNSEAGNFECNICFDLTQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKSSTDPKSKSIPGVNIPNRPTGQRPETAPPPEPSXXXXXXXXXXXXXLCGFAPMAAARFGNFTLSAAFGGLIPPLFNLQVHGFPDPTMYGPAASFPYGFTNSFHGGHAHG 675 T ++ P S++N + E+ FECNIC D +D +V+LCGHLFCWPCL +WL N + CPVCK+ I+ K+VP+YGRG S+DP+ K +P RP GQR E P P + G P FG T++ GL P +F L P + G FP F SF G G Sbjct: 5 TKAPSEEPTSSSNKD-ESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIYGRGGDSSDPRKK------VPPRPKGQRSE----PPPQSFAGFNWGGDGGMMGGGGPNVHFSFGIGTVN----GLFPLMFML-------PFIQG---IFPLSFVASFFGNGNQG 168
BLAST of DR403314 vs. ExPASy Swiss-Prot
Match: RN185_RAT (RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.359e-26 Identity = 57/121 (47.11%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 91 SSFGESTSRSAQN-----PYSNNNSNSEAGN----FECNICFDLTQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKS-STDPKSKSIPGVNIPNRPTGQRPE 423 +S G S S S +N P ++N E+G FECNIC D +D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG + DP+ K+ P RP GQRPE Sbjct: 2 ASKGPSASASTENSSAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE 116
BLAST of DR403314 vs. ExPASy Swiss-Prot
Match: RN185_MOUSE (RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.359e-26 Identity = 57/121 (47.11%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 91 SSFGESTSRSAQN-----PYSNNNSNSEAGN----FECNICFDLTQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKS-STDPKSKSIPGVNIPNRPTGQRPE 423 +S G S S S +N P ++N E+G FECNIC D +D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG + DP+ K+ P RP GQRPE Sbjct: 2 ASKGPSASASTENSNAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE 116
BLAST of DR403314 vs. ExPASy Swiss-Prot
Match: RN185_PONAB (RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.194e-25 Identity = 57/121 (47.11%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 91 SSFGESTSRSAQN-----PYSNNNSNSEAGN----FECNICFDLTQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKS-STDPKSKSIPGVNIPNRPTGQRPE 423 +S G S S S +N P ++N E+G FECNIC D +D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG + DP+ K+ P RP GQRPE Sbjct: 2 ASKGPSASSSPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE 116
BLAST of DR403314 vs. ExPASy Swiss-Prot
Match: RN185_HUMAN (RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.194e-25 Identity = 57/121 (47.11%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 91 SSFGESTSRSAQN-----PYSNNNSNSEAGN----FECNICFDLTQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKS-STDPKSKSIPGVNIPNRPTGQRPE 423 +S G S S S +N P ++N E+G FECNIC D +D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG + DP+ K+ P RP GQRPE Sbjct: 2 ASKGPSASASPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE 116
BLAST of DR403314 vs. ExPASy Swiss-Prot
Match: RN185_DANRE (RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.194e-25 Identity = 56/120 (46.67%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 88 ASSFGESTSRSAQNPYSNNNSNSEAGN-------FECNICFDLTQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKS-STDPKSKSIPGVNIPNRPTGQRPE 423 A+S S+S S+ +N S E+G FECNIC D ++D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG + DP+ K+ P RP GQRPE Sbjct: 5 AASESSSSSSSSSAGAANGQSAGESGGGGAQDSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE 118
BLAST of DR403314 vs. ExPASy Swiss-Prot
Match: RN185_CHICK (RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.036e-25 Identity = 54/112 (48.21%), Postives = 73/112 (65.18%), Query Frame = 1 Query: 91 SSFGESTSRSAQNPYSNNNSNSEAGNFECNICFDLTQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKS-STDPKSKSIPGVNIPNRPTGQRPE 423 SS TS S+ + + +N+N + FECNIC D +D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG + DP+ K+ P RP GQRPE Sbjct: 14 SSSTGGTSGSSSSNGAGDNTNQD-NTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE 118
BLAST of DR403314 vs. ExPASy Swiss-Prot
Match: RNF5_RAT (E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.613e-22 Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = 1 Query: 139 NNNSNSEAGNFECNICFDLTQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRG-KSSTDPKSKSIPGVNIPNRPTGQRP 420 N + FECNIC + ++ +V++CGHL+CWPCL++WL + +ECPVCKA I EK+VPLYGRG + DP+ K+ P RP GQRP Sbjct: 15 NRERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGSQKPQDPRLKT------PPRPQGQRP 103
BLAST of DR403314 vs. ExPASy Swiss-Prot
Match: RNF5_MOUSE (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.613e-22 Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = 1 Query: 139 NNNSNSEAGNFECNICFDLTQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRG-KSSTDPKSKSIPGVNIPNRPTGQRP 420 N + FECNIC + ++ +V++CGHL+CWPCL++WL + +ECPVCKA I EK+VPLYGRG + DP+ K+ P RP GQRP Sbjct: 15 NRERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGSQKPQDPRLKT------PPRPQGQRP 103
BLAST of DR403314 vs. ExPASy Swiss-Prot
Match: RNF5_HUMAN (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22 Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 130 PYSNNNSNSEAG-NFECNICFDLTQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRG-KSSTDPKSKSIPGVNIPNRPTGQRP 420 P N AG FECNIC + ++ +V++CGHL+CWPCL++WL +ECPVCKA I EK+VPLYGRG + DP+ K+ P RP GQRP Sbjct: 11 PEGPNRERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVPLYGRGSQKPQDPRLKT------PPRPQGQRP 103 The following BLAST results are available for this feature:
BLAST of DR403314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403314 ID=DR403314; Name=DR403314; organism=Citrus sinensis; type=EST; length=693bpback to top |