DR403172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403172 vs. ExPASy Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.159e-25 Identity = 57/67 (85.07%), Postives = 59/67 (88.06%), Query Frame = 3 Query: 228 SSTLGNHISDCIMEKNDLTPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 428 ++ LG IMEKNDL PAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH Sbjct: 31 AAPLGTISRTGIMEKNDLRPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 97 HSP 2 Score: 75.485 bits (184), Expect = 2.294e-13 Identity = 39/40 (97.50%), Postives = 39/40 (97.50%), Query Frame = 1 Query: 139 MARSLFKAKLLLAPVADGISLSIGRRGYAAAAPLGTISRT 258 MARSLFKAKLLLAPVADGISLSI RRGYAAAAPLGTISRT Sbjct: 1 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRT 40
BLAST of DR403172 vs. ExPASy Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.045e-17 Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 264 MEKNDLTPAVREDSGA-----SSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRA 425 M K + A++E S + SSAWAPDP+TGYYRPEN EID AELREMLLNH+VR+ Sbjct: 46 MGKVERRDAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLLNHRVRS 104 HSP 2 Score: 36.5798 bits (83), Expect = 5.045e-17 Identity = 18/33 (54.55%), Postives = 23/33 (69.70%), Query Frame = 1 Query: 139 MARSLFKAKLLLAPVADGISLSIGRRGYAAAAP 237 MARS+ KLL A + DG+ +SI RRGY+ A P Sbjct: 1 MARSVSSFKLLGASIFDGLYVSISRRGYSGAPP 33
BLAST of DR403172 vs. ExPASy Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.366e-15 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 264 MEKNDLTPAVREDSGA-----SSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRA 425 M K + A++E S + SSAWAPDP+TGYYRPEN EID A+LREM+LNH+VR+ Sbjct: 46 MGKVERRYAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMMLNHRVRS 104 HSP 2 Score: 33.113 bits (74), Expect = 3.366e-15 Identity = 17/33 (51.52%), Postives = 21/33 (63.64%), Query Frame = 1 Query: 139 MARSLFKAKLLLAPVADGISLSIGRRGYAAAAP 237 MARS+ K L A V D + +SI RRGY+ A P Sbjct: 1 MARSVSSFKFLGASVFDALYVSISRRGYSGAPP 33 The following BLAST results are available for this feature:
BLAST of DR403172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403172 ID=DR403172; Name=DR403172; organism=Citrus sinensis; type=EST; length=597bpback to top |