DN621615
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621615 vs. ExPASy Swiss-Prot
Match: LCYE_SOLLC (Lycopene epsilon cyclase, chloroplastic OS=Solanum lycopersicum GN=CRTL-E-1 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.523e-62 Identity = 118/148 (79.73%), Postives = 131/148 (88.51%), Query Frame = -2 Query: 248 SMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWMWHGFLGSSLSSADLILFAFYMFIIAPNDLRKCLIRHLVSDPTGATMVRTYLT 691 SMVHPATGYSVVRSLSEAP AS +A IL+ +S+ LT S +IS QAWNTLWPQERKRQR+FFLFGLALILQLDIEGIR+FFR FFR+PKWMW GFLGSSLSSADL+LFAFYMFIIAPND+RK LIRHL+SDPTGAT++RTYLT Sbjct: 379 SMVHPATGYSVVRSLSEAPKCASVLANILRQHYSKNMLT-SSSIPSISTQAWNTLWPQERKRQRSFFLFGLALILQLDIEGIRSFFRAFFRVPKWMWQGFLGSSLSSADLMLFAFYMFIIAPNDMRKGLIRHLLSDPTGATLIRTYLT 525
BLAST of DN621615 vs. ExPASy Swiss-Prot
Match: LCYE_ARATH (Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana GN=LUT2 PE=1 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 1.061e-58 Identity = 110/147 (74.83%), Postives = 125/147 (85.03%), Query Frame = -2 Query: 251 SMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWMWHGFLGSSLSSADLILFAFYMFIIAPNDLRKCLIRHLVSDPTGATMVRTYL 691 SMVHPATGYSVVRSLSEAP YAS IA IL+ + T +Q N NIS QAW+TLWP ERKRQRAFFLFGLALI+Q D EGIR+FFRTFFRLPKWMW GFLGS+L+S DL+LFA YMF+I+PN+LRK LI HL+SDPTGATM++TYL Sbjct: 382 SMVHPATGYSVVRSLSEAPKYASVIAEILREE------TTKQINSNISRQAWDTLWPPERKRQRAFFLFGLALIVQFDTEGIRSFFRTFFRLPKWMWQGFLGSTLTSGDLVLFALYMFVISPNNLRKGLINHLISDPTGATMIKTYL 522
BLAST of DN621615 vs. ExPASy Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.079e-22 Identity = 55/125 (44.00%), Postives = 71/125 (56.80%), Query Frame = -2 Query: 314 MVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWMWHGFLGSSLSSADLILFAFYMFIIAPNDLR 688 MVHP+TGY V R+L+ AP A+AI L + S S + +S W LWP ER+RQR FF FG+ ++L+LD+ R FF FF L WHGFL S L +LI+F +F A N R Sbjct: 358 MVHPSTGYMVARTLAAAPVVANAIIQYLSSERSH-------SGDELSAAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFSHASNTSR 475
BLAST of DN621615 vs. ExPASy Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.037e-21 Identity = 54/122 (44.26%), Postives = 70/122 (57.38%), Query Frame = -2 Query: 323 MVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWMWHGFLGSSLSSADLILFAFYMFIIAPN 688 MVHP+TGY V R+L+ AP A++I L D S ++S W LWP ER+RQR FF FG+ ++L+LD+EG R FF FF L WHGFL S L +L+ F +F A N Sbjct: 363 MVHPSTGYMVARTLAAAPIVANSIVQYLVSDSGL-------SGNDLSADVWKDLWPIERRRQREFFCFGMDILLKLDLEGTRRFFDAFFDLEPRYWHGFLSSRLFLPELVPFGLSLFSHASN 477
BLAST of DN621615 vs. ExPASy Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21 Identity = 55/125 (44.00%), Postives = 70/125 (56.00%), Query Frame = -2 Query: 314 MVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWMWHGFLGSSLSSADLILFAFYMFIIAPNDLR 688 MVHP+TGY V R+L+ AP A+AI L + S S +S W LWP ER+RQR FF FG+ ++L+LD+ R FF FF L WHGFL S L +LI+F +F A N R Sbjct: 360 MVHPSTGYMVARTLAAAPVVANAIIQYLGSERSH-------SGNELSTAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFSHASNTSR 477
BLAST of DN621615 vs. ExPASy Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.310e-21 Identity = 53/125 (42.40%), Postives = 72/125 (57.60%), Query Frame = -2 Query: 314 MVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWMWHGFLGSSLSSADLILFAFYMFIIAPNDLR 688 MVHP+TGY V R+L+ AP A+AI L S + + +S + W LWP ER+RQR FF FG+ ++L+LD++ R FF FF L WHGFL S L +L++F +F A N R Sbjct: 359 MVHPSTGYMVARTLAAAPIVANAIVRYLGSPSS-----NSLRGDQLSAEVWRDLWPIERRRQREFFCFGMDILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSHASNTSR 478
BLAST of DN621615 vs. ExPASy Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.357e-20 Identity = 52/125 (41.60%), Postives = 69/125 (55.20%), Query Frame = -2 Query: 314 MVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWMWHGFLGSSLSSADLILFAFYMFIIAPNDLR 688 +VHP+TGY V R+L+ AP A+AI + L + + +S W LWP ER+RQR FF FG+ ++L+LD+ R FF FF L WHGFL S L +LI F +F A N R Sbjct: 360 LVHPSTGYMVARTLAAAPVVANAIIHYLGSEK-------DLLGNELSAAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLYLPELIFFGLSLFSRASNTSR 477
BLAST of DN621615 vs. ExPASy Swiss-Prot
Match: CCS_CITSI (Capsanthin/capsorubin synthase, chromoplast OS=Citrus sinensis GN=CCS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.656e-19 Identity = 53/126 (42.06%), Postives = 72/126 (57.14%), Query Frame = -2 Query: 314 MVHPATGYSVVRSLSEAPNYASAIAYILKHDHS-RGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWMWHGFLGSSLSSADLILFAFYMFIIAPNDLR 688 ++HPATGY V R+++ AP A AIA L RGR H++ WN LWP +R+ R F+ FG+ +L+LD++G R FF FF L + WHGFL S LS A+L + +F A N R Sbjct: 363 LIHPATGYMVARTMALAPALADAIAECLGSTRMIRGRPLHQK--------VWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFLSSRLSLAELAGLSLSLFGHASNSSR 480
BLAST of DN621615 vs. ExPASy Swiss-Prot
Match: LCYB_SYNE7 (Lycopene beta cyclase OS=Synechococcus elongatus (strain PCC 7942) GN=crtL PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 50/126 (39.68%), Postives = 70/126 (55.56%), Query Frame = -2 Query: 314 SMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWMWHGFLGSSLSSADLILFAFYMFIIAPNDLR 691 SMVHPA+GY V L AP+ A+AIA L S + ++ QAW LWP E+ R+ + FGL +++ + F+TFF LPK W+GFL ++LS +LI +F APND+R Sbjct: 272 SMVHPASGYMVGALLRRAPDLANAIAAGLNASSSL-------TTAELATQAWRGLWPTEKIRKHYIYQFGLEKLMRFSEAQLNHHFQTFFGLPKEQWYGFLTNTLSLPELIQAMLRLFAQAPNDVR 390
BLAST of DN621615 vs. ExPASy Swiss-Prot
Match: CCS_CAPAN (Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum GN=CCS PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = -2 Query: 323 MVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWMWHGFLGSSLSSADLILFAFYMFIIAPN 688 +VHP++GY V RS++ AP A AI L T + + WN LWP +R+R R + FG+ +L+LD+EG R F FF + WHGFL S LS +L + + Y+F A N Sbjct: 358 IVHPSSGYMVARSMALAPVLAEAIVESLGS-------TRMIRGSQLYHRVWNGLWPSDRRRVRECYCFGMETLLKLDLEGTRRLFDAFFDVDPKYWHGFLSSRLSVKELAVLSLYLFGHASN 472 The following BLAST results are available for this feature:
BLAST of DN621615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621615 ID=DN621615; Name=DN621615; organism=Citrus sinensis; type=EST; length=692bpback to top |