DN621606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621606 vs. ExPASy Swiss-Prot
Match: RN185_PONAB (RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 9.424e-29 Identity = 77/187 (41.18%), Postives = 97/187 (51.87%), Query Frame = 3 Query: 39 MASGFSESTSVPSQN----PSCVGNSANDAGG----FECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKT-QTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG------GLFPSLFNIQFHGFPDATVYGT 554 MAS ++S P + PS N A ++GG FECNIC + A+D +++LCGHLFCWPCL++WL + Q CPVCKA + +K++PLYGRG T Q DPR K+ P RP GQRPE P F G F M FG G+F + FNI G P V GT Sbjct: 1 MASKGPSASSSPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE---PENRGGFQGFGFGD------------GGFQMSFGIGAFPFGIFATAFNIN-DGRPPPAVPGT 165
BLAST of DN621606 vs. ExPASy Swiss-Prot
Match: RNF5_CAEEL (RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.608e-28 Identity = 75/207 (36.23%), Postives = 102/207 (49.28%), Query Frame = 3 Query: 54 SESTSVPSQNPSCVGNSANDAGGFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKTQTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG---GLFPSLFNIQF---------------HGFPDATVYGTTSGFPN----GFSAFHGGHVHG 608 + T PS+ P+ N +++ FECNIC + A+D +V+LCGHLFCWPCL +WL ++Q CPVCK+ + K+VP+YGRG +DPR K +P RP GQR E PPP++ N +F+ G G GLFP +F + F +G A G +G N G A GH HG Sbjct: 2 ASETKAPSEEPTSSSNK-DESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIYGRGGDSSDPRKK------VPPRPKGQRSE--PPPQSFAGFNWGGDGGMMGGGGPNV---HFSFGIGTVNGLFPLMFMLPFIQGIFPLSFVASFFGNGNQGAAAAGGGNGGGNDGNDGTHAHTHGHTHG 196
BLAST of DN621606 vs. ExPASy Swiss-Prot
Match: RN185_RAT (RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.608e-28 Identity = 73/178 (41.01%), Postives = 91/178 (51.12%), Query Frame = 3 Query: 42 ASGFSESTSVPSQNPSCVGNSANDAGGFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKT-QTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG------GLFPSLFNIQFHGFPDATVYGT 554 AS + S PS + + G S FECNIC + A+D +++LCGHLFCWPCL++WL + Q CPVCKA + +K++PLYGRG T Q DPR K+ P RP GQRPE P F G F M FG G+F + FNI G P V GT Sbjct: 10 ASTENSSAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE---PENRGGFQGFGFGD------------GGFQMSFGIGAFPFGIFATAFNIN-DGRPPPAVPGT 165
BLAST of DN621606 vs. ExPASy Swiss-Prot
Match: RN185_MOUSE (RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.608e-28 Identity = 76/185 (41.08%), Postives = 95/185 (51.35%), Query Frame = 3 Query: 42 ASGFSESTSVPSQN---PSCVGNSANDAGG----FECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKT-QTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG------GLFPSLFNIQFHGFPDATVYGT 554 + G S S S + N PS N ++GG FECNIC + A+D +++LCGHLFCWPCL++WL + Q CPVCKA + +K++PLYGRG T Q DPR K+ P RP GQRPE P F G F M FG G+F + FNI G P V GT Sbjct: 3 SKGPSASASTENSNAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE---PENRGGFQGFGFGD------------GGFQMSFGIGAFPFGIFATAFNIN-DGRPPPAVPGT 165
BLAST of DN621606 vs. ExPASy Swiss-Prot
Match: RN185_HUMAN (RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.608e-28 Identity = 73/178 (41.01%), Postives = 91/178 (51.12%), Query Frame = 3 Query: 42 ASGFSESTSVPSQNPSCVGNSANDAGGFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKT-QTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG------GLFPSLFNIQFHGFPDATVYGT 554 AS + S PS + + G S FECNIC + A+D +++LCGHLFCWPCL++WL + Q CPVCKA + +K++PLYGRG T Q DPR K+ P RP GQRPE P F G F M FG G+F + FNI G P V GT Sbjct: 10 ASPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE---PENRGGFQGFGFGD------------GGFQMSFGIGAFPFGIFATAFNIN-DGRPPPAVPGT 165
BLAST of DN621606 vs. ExPASy Swiss-Prot
Match: RN185_DANRE (RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.677e-28 Identity = 74/185 (40.00%), Postives = 95/185 (51.35%), Query Frame = 3 Query: 42 ASGFSESTSVPSQNPSCVGNSANDAGG-------FECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKT-QTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG------GLFPSLFNIQFHGFPDATVYGT 554 A+ S S+S S + G SA ++GG FECNIC + ++D +++LCGHLFCWPCL++WL + Q CPVCKA + +K++PLYGRG T Q DPR K+ P RP GQRPE P F G F M FG G+F + FNI G P GT Sbjct: 5 AASESSSSSSSSSAGAANGQSAGESGGGGAQDSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE---PENRGGFQGFGFGD------------GGFQMSFGIGAFPFGIFATAFNIN-DGRPPPAAPGT 167
BLAST of DN621606 vs. ExPASy Swiss-Prot
Match: RN185_CHICK (RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.677e-28 Identity = 75/180 (41.67%), Postives = 93/180 (51.67%), Query Frame = 3 Query: 42 ASGFSESTSVPSQNPSC--VGNSANDAGGFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKT-QTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG------GLFPSLFNIQFHGFPDATVYGT 554 AS S ST S + S G++ N FECNIC + A+D +++LCGHLFCWPCL++WL + Q CPVCKA + +K++PLYGRG T Q DPR K+ P RP GQRPE P F G F M FG G+F + FNI G P V GT Sbjct: 10 ASTKSSSTGGTSGSSSSNGAGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE---PENRGGFQGFGFGD------------GGFQMSFGIGAFPFGIFATAFNIN-DGRPPPAVPGT 167
BLAST of DN621606 vs. ExPASy Swiss-Prot
Match: RNF5_RAT (E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.989e-24 Identity = 58/125 (46.40%), Postives = 72/125 (57.60%), Query Frame = 3 Query: 39 MASGFSESTSVPSQNPSCVGNSANDAGGFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKTQ-TDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFP 410 MA+ E N G SA FECNIC E A++ +V++CGHL+CWPCL++WL QECPVCKA + EK+VPLYGRG + DPR K+ P RP GQRP AP + P Sbjct: 1 MAAAEEEDGGPEGPNRERGGASAT----FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGSQKPQDPRLKT------PPRPQGQRP--APESRGGFQP 113
BLAST of DN621606 vs. ExPASy Swiss-Prot
Match: RNF5_MOUSE (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.989e-24 Identity = 58/125 (46.40%), Postives = 72/125 (57.60%), Query Frame = 3 Query: 39 MASGFSESTSVPSQNPSCVGNSANDAGGFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKTQ-TDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFP 410 MA+ E N G SA FECNIC E A++ +V++CGHL+CWPCL++WL QECPVCKA + EK+VPLYGRG + DPR K+ P RP GQRP AP + P Sbjct: 1 MAAAEEEDGGPEGPNRERGGASAT----FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGSQKPQDPRLKT------PPRPQGQRP--APESRGGFQP 113
BLAST of DN621606 vs. ExPASy Swiss-Prot
Match: RNF5_HUMAN (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.989e-24 Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 3 Query: 123 FECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKTQ-TDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFP 410 FECNIC E A++ +V++CGHL+CWPCL++WL QECPVCKA + EK+VPLYGRG + DPR K+ P RP GQRP AP + P Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVPLYGRGSQKPQDPRLKT------PPRPQGQRP--APESRGGFQP 113 The following BLAST results are available for this feature:
BLAST of DN621606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621606 ID=DN621606; Name=DN621606; organism=Citrus sinensis; type=EST; length=627bpback to top |