DN621544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.022e-66 Identity = 124/126 (98.41%), Postives = 124/126 (98.41%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 680 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDLEDYVSRPDKISAAEI AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK Sbjct: 288 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 413
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.022e-66 Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 680 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCT+KMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR NVKKPDTDFEFYK Sbjct: 283 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTDFEFYK 408
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.636e-56 Identity = 105/125 (84.00%), Postives = 115/125 (92.00%), Query Frame = -2 Query: 306 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 680 LNQMDGFD +VNVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRL+FQV T+KMNLSDEVDLEDYVSRPDK+S AEI +ICQEAGMHA+RKNRYVILPKDFEKGY+ ++KK +F FY Sbjct: 278 LNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFEKGYKASIKKNTHEFNFY 402
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 6.215e-56 Identity = 100/126 (79.37%), Postives = 118/126 (93.65%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 680 LNQMDGFDQT NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F TAKMNLS+EVDLE++V+RPD++S A+I AICQEAGM+AVR+NRY++LPKDFEKGY+ N+KK ++++EFYK Sbjct: 290 LNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDFEKGYKNNIKKDESEYEFYK 415
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.432e-53 Identity = 99/126 (78.57%), Postives = 113/126 (89.68%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 680 LNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F T+KMNLS+EVDLEDYV+RPDKIS A+I +ICQE+GM AVR+NRY++L KDFEK Y+T +KK + + EFYK Sbjct: 293 LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.432e-53 Identity = 99/126 (78.57%), Postives = 113/126 (89.68%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 680 LNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F T+KMNLS+EVDLEDYV+RPDKIS A+I +ICQE+GM AVR+NRY++L KDFEK Y+T +KK + + EFYK Sbjct: 293 LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 6.432e-53 Identity = 99/126 (78.57%), Postives = 113/126 (89.68%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 680 LNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F T+KMNLS+EVDLEDYV+RPDKIS A+I +ICQE+GM AVR+NRY++L KDFEK Y+T +KK + + EFYK Sbjct: 293 LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.432e-53 Identity = 99/126 (78.57%), Postives = 113/126 (89.68%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 680 LNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F T+KMNLS+EVDLEDYV+RPDKIS A+I +ICQE+GM AVR+NRY++L KDFEK Y+T +KK + + EFYK Sbjct: 293 LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.702e-51 Identity = 98/126 (77.78%), Postives = 109/126 (86.51%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 680 LNQMDGFDQ+ NVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRLVF ++MNLSD+VDLED+V+RPDKIS A+I +ICQEAGM AVR+NRYV+L KD EK Y+ VKK DFEFYK Sbjct: 289 LNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDTNDFEFYK 414
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.341e-50 Identity = 96/126 (76.19%), Postives = 109/126 (86.51%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 680 LNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F T+KMNLS+EVDLEDYV+RPDKIS A+I +ICQ GM AVR+ Y++L KDFEK Y+T +KK + + EFYK Sbjct: 293 LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDFEKAYKTVIKKDEQEHEFYK 418 The following BLAST results are available for this feature:
BLAST of DN621544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621544 ID=DN621544; Name=DN621544; organism=Citrus sinensis; type=EST; length=681bpback to top |