DN621401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 3.939e-71 Identity = 121/141 (85.82%), Postives = 132/141 (93.62%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN LSNDNGGWCNPPLQHFD+AEPAFLQIAQYRAGIVP+SFRR+PC KKGGIRFT+NGHSYFNLVL++NVGGAGDVH+VSIKGSKT WQAMSRNWGQNWQSNSY+N QSLSFQVT SDGRT+ SN+V P+NW Sbjct: 102 TATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNW 242
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 259.225 bits (661), Expect = 1.401e-68 Identity = 118/140 (84.29%), Postives = 124/140 (88.57%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATN CPPN AL ND+GGWCNPP HFDMAEPAFLQI YRAGIVP+S+RR+PC KKGGIRFT+NGHSYFNLVLVTNV G GDV SVSIKGS TGWQ MSRNWGQNWQSNSYL+GQSLSFQV SDGRTVTSNNVVPA W Sbjct: 101 TATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGW 240
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.121e-68 Identity = 117/140 (83.57%), Postives = 126/140 (90.00%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN L +D+GGWCNPP HFDMAEPAFL IAQYRAGIVP+SFRR+PC KKGG+RFTVNGHSYFNLVLVTNV GAGDV SVSIKGS+TGWQ MSRNWGQNWQSN++L+GQSLSFQVTASDGRTVTSNNV W Sbjct: 96 TATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGW 235
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.121e-68 Identity = 117/140 (83.57%), Postives = 126/140 (90.00%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN L +D+GGWCNPP HFDMAEPAFL IAQYRAGIVP+SFRR+PC KKGG+RFTVNGHSYFNLVLVTNV GAGDV SVSIKGS+TGWQ MSRNWGQNWQSN++L+GQSLSFQVTASDGRTVTSNNV W Sbjct: 96 TATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGW 235
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 2.642e-67 Identity = 111/140 (79.29%), Postives = 128/140 (91.43%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN AL+N+NGGWCNPPL+HFD+A+P F +IAQYRAGIVP+S+RR+PC ++GGIRFT+NGHSYFNLVL+TNVGGAGDVHS +IKGS+T WQAMSRNWGQNWQSNSYLNGQ+LSF+VT SDGRTV S N PA W Sbjct: 98 TATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGW 237
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 3.815e-66 Identity = 108/140 (77.14%), Postives = 126/140 (90.00%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN AL N+ GGWCNPP QHFD+++P F +IAQYRAGIVP+++RR+PC ++GGIRFT+NGHSYFNLVL+TNVGGAGDVHS +KGS+TGWQAMSRNWGQNWQSNSYLNGQSLSF+VT SDG+T+ SNNV A W Sbjct: 99 TATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGW 238
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 249.98 bits (637), Expect = 8.499e-66 Identity = 107/140 (76.43%), Postives = 128/140 (91.43%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPN AL N+ GGWCNPPL HFD+++P F +IAQY+AG+VP+S+RR+PC ++GGIRFT+NGHSYFNLVLVTNVGGAGDVHSV++KGS+T WQ MSRNWGQNWQSN+ LNGQ+LSF+VTASDGRTV SNN+ PA+W Sbjct: 102 TATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASW 241
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 247.284 bits (630), Expect = 5.509e-65 Identity = 111/141 (78.72%), Postives = 129/141 (91.49%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 +ATNFCPPN AL+NDNGGWCNPPL+HFD+AEPAFLQIAQYRAGIVP++FRR+PC K GGIRFT+NG+ YF+LVL+TNVGGAGD+ +VS+KGSKT WQ+MSRNWGQNWQSN+YL GQSLSFQVT SDGRTV S +VVP +W Sbjct: 104 SATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDW 244
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 2.829e-61 Identity = 102/140 (72.86%), Postives = 122/140 (87.14%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 TATNFCPPNLA +DNGGWCNPP +HFD+A P FL+IAQYRAGIVP+S+RR+PC K+GGIRFT+NGH YFNLVL+TNV GAGD+ S+KGS+TGW ++SRNWGQNWQSN+ L GQ+LSF+VT SD RT TS N+VP+NW Sbjct: 105 TATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNW 244
BLAST of DN621401 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.232e-61 Identity = 101/140 (72.14%), Postives = 120/140 (85.71%), Query Frame = -2 Query: 255 TATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 674 T TNFCPPN A +N+ GGWCNPP HFD+A+P FL+IAQY+AG+VP+ +RR+ C +KGGIRFT+NGHSYFNLVL+TNV GAGDV SVSIKG+ T WQ+MSRNWGQNWQSN+ L+GQ+LSF+VT SDGRTV SNN P NW Sbjct: 101 TGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNW 240 The following BLAST results are available for this feature:
BLAST of DN621401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621401 ID=DN621401; Name=DN621401; organism=Citrus sinensis; type=EST; length=675bpback to top |