DN621390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621390 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.230e-28 Identity = 67/84 (79.76%), Postives = 69/84 (82.14%), Query Frame = -3 Query: 179 AEIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA------APPGAD---GGSDPFASSAGGAEDDDLYS 403 AEIKA HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA A PGA GG DPFA+S G A+DDDLYS Sbjct: 732 AEIKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAPTGTTGAFPGAAATVGGVDPFATSGGAADDDDLYS 815
BLAST of DN621390 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.522e-27 Identity = 61/75 (81.33%), Postives = 67/75 (89.33%), Query Frame = -3 Query: 179 AEIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGGSDPFASSAGGAEDDDLYS 403 AEIKA HFEESMK+ARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP++ GSDPFA+SAGGA++DDLYS Sbjct: 734 AEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPESG-DRTTTGSDPFAASAGGADEDDLYS 807
BLAST of DN621390 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 1.860e-25 Identity = 59/78 (75.64%), Postives = 64/78 (82.05%), Query Frame = -3 Query: 179 AEIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGG---SDPFASSAGGAEDDDLYS 403 +EI+A HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF A G G +DPFA+SA A+DDDLYS Sbjct: 733 SEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFDSTAGVGRTTGVAAADPFATSAAAADDDDLYS 810
BLAST of DN621390 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.173e-25 Identity = 60/77 (77.92%), Postives = 67/77 (87.01%), Query Frame = -3 Query: 179 AEIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGG-SDPFASSAGGA-EDDDLYS 403 +EIKA HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF ++A GA G +DPFA+SA A +DDDLY+ Sbjct: 733 SEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFENSAGSGATTGVADPFATSAAAAGDDDDLYN 809
BLAST of DN621390 vs. ExPASy Swiss-Prot
Match: CDC48_CAPAN (Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.413e-25 Identity = 57/74 (77.03%), Postives = 62/74 (83.78%), Query Frame = -3 Query: 179 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGGSDPFASSAGGAEDDDLYS 400 EIK HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFG+EFRF D + GA +DPFA+S A+DDDLYS Sbjct: 733 EIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFADTS-GGATAAADPFATSNAAADDDDLYS 805
BLAST of DN621390 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 3.757e-18 Identity = 47/79 (59.49%), Postives = 56/79 (70.89%), Query Frame = -3 Query: 179 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPP-----GADGGSDPFASSAGGAEDDDLYS 400 EI HFEE+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+FP AP G +GGS GG +DDDLY+ Sbjct: 739 EITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFPGEAPSAGQPVGGNGGS-------GGNDDDDLYN 810
BLAST of DN621390 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.907e-18 Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = -3 Query: 179 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGGSDPFASSAGGAEDDDLYS 400 EI + HFEE+MK+ARRSVSD DIRKY+ FAQTLQQSRGFG FRFP + G++ +S G DDDLYS Sbjct: 728 EITSAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQNFRFPGQTGNTSGSGNNLPVNSPGDNGDDDLYS 801
BLAST of DN621390 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.086e-17 Identity = 43/74 (58.11%), Postives = 53/74 (71.62%), Query Frame = -3 Query: 179 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGGSDPFASSAGGAEDDDLYS 400 EI HFEE+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+F PG GSD ++ +DDDLY+ Sbjct: 741 EITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKF-----PGEQRGSDAPSAPVPAQDDDDLYN 809
BLAST of DN621390 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.209e-16 Identity = 47/80 (58.75%), Postives = 56/80 (70.00%), Query Frame = -3 Query: 182 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGGSDPFASSAGGA-------EDDDLY 400 EI+ HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRF P G GG+ P + GG+ E+DDLY Sbjct: 730 EIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF----PAGGQGGAGPSQGAGGGSGGSHFNEEEDDLY 804
BLAST of DN621390 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 1.209e-16 Identity = 47/76 (61.84%), Postives = 52/76 (68.42%), Query Frame = -3 Query: 182 EIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAPPGADGGSDPFASSAGG---AEDDDLY 400 EI+ HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP GA S GG EDDDLY Sbjct: 730 EIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPAGGQSGAGPSPGAGGGSGGGHFTEEDDDLY 804 The following BLAST results are available for this feature:
BLAST of DN621390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621390 ID=DN621390; Name=DN621390; organism=Citrus sinensis; type=EST; length=405bpback to top |