DN620941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN620941 vs. ExPASy Swiss-Prot
Match: ISPE_SOLLC (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic (Fragment) OS=Solanum lycopersicum GN=ISPE PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 2.485e-54 Identity = 103/149 (69.13%), Postives = 123/149 (82.55%), Query Frame = 1 Query: 88 SIRPNGFSFFKPKINFRRTQLI-------KCTRKQVEVVYDPDERRNKLADEVDKEAPLSRLTLFSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGIPVDDSNLIIKALNLYRKKTESDNFFWIHL 513 S RP+G S+F I FRR + + ++KQVE+ Y+P+E+ NKLADEVD+EA LSRLTLFSPCKIN FLRIT+KR+DG+HDLASLFHVISLGD IKFSLSP KS+DRLSTNV G+P+D+ NLIIKALNLYRKKT +DN+FWIHL Sbjct: 28 SNRPHGSSYFNKNIQFRRNSFVIVKASGSRTSKKQVEITYNPEEKFNKLADEVDREAGLSRLTLFSPCKINVFLRITSKRDDGYHDLASLFHVISLGDKIKFSLSPSKSKDRLSTNVAGVPLDERNLIIKALNLYRKKTGTDNYFWIHL 176
BLAST of DN620941 vs. ExPASy Swiss-Prot
Match: ISPE_ARATH (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Arabidopsis thaliana GN=ISPE PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.233e-53 Identity = 105/143 (73.43%), Postives = 117/143 (81.82%), Query Frame = 1 Query: 88 SIRPNGFSFFKPKINFRRTQL-IKCTRKQVEVVYDPDERRNKLADEVDKEAPLSRLTLFSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGIPVDDSNLIIKALNLYRKKTESDNFFWIHL 513 S + + S F PK+ +K +RKQVE+V+DPDER NK+ D+VDKEAPLSRL LFSPCKIN FLRIT KREDGFHDLASLFHVISLGDTIKFSLSP KS+DRLSTNV G+PVD NLIIKALNLYRKKT S+ FFWIHL Sbjct: 18 SFKTSSSSSFSPKLLRPLLSFSVKASRKQVEIVFDPDERLNKIGDDVDKEAPLSRLKLFSPCKINVFLRITGKREDGFHDLASLFHVISLGDTIKFSLSPSKSKDRLSTNVQGVPVDGRNLIIKALNLYRKKTGSNRFFWIHL 160
BLAST of DN620941 vs. ExPASy Swiss-Prot
Match: ISPE_MENPI (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Mentha piperita GN=ISPE PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.194e-48 Identity = 97/149 (65.10%), Postives = 112/149 (75.17%), Query Frame = 1 Query: 88 SIRPNGFSFFKPKINFRRTQLIKCT-------RKQVEVVYDPDERRNKLADEVDKEAPLSRLTLFSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGIPVDDSNLIIKALNLYRKKTESDNFFWIHL 513 S +PNG S F+ K+ R +I+ R Q+EVVYD + + NKLADEVD+EA +SRLTLFSPCKIN FLRIT KREDGFHDLASLFHVISLGD IKFSLSP K TNVPG+P+D+ NLIIKALNL+RKKT +D FWIHL Sbjct: 37 SFKPNGSSSFRKKLQSSRIHIIRAAASDPTTGRNQLEVVYDLENKLNKLADEVDREAGISRLTLFSPCKINVFLRITGKREDGFHDLASLFHVISLGDKIKFSLSPSKFNGSFVTNVPGVPLDEKNLIIKALNLFRKKTGTDKHFWIHL 185
BLAST of DN620941 vs. ExPASy Swiss-Prot
Match: ISPE_PARUW (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Protochlamydia amoebophila (strain UWE25) GN=ispE PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.686e-16 Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 250 LTLFSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGIPVDDSNLIIKALNLYRKKTESDNFFWIHL 513 + LFSP KIN FL++ KR DG+H+L+SLF IS GD + F + D L+ + P +P DDSNL++KA+ L+R KT D IHL Sbjct: 15 IRLFSPAKINLFLKVIGKRADGYHELSSLFQTISAGDILTFQRQTI---DTLTCSDPYLPTDDSNLVLKAMRLFRSKTGLDLHLRIHL 99
BLAST of DN620941 vs. ExPASy Swiss-Prot
Match: ISPE_MARAV (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ispE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.086e-13 Identity = 36/83 (43.37%), Postives = 53/83 (63.86%), Query Frame = 1 Query: 241 LSRLTLFSPCKINAFLRITNKREDGFHDLASLFHVISLGDTIKFSLSPLKSRDRLSTNVPGIPVDDSNLIIKALNLYRKKTES 489 L+R+TL SP K+N FL I +R DG+H+L +LF + GD + F+L+P + RL+ VPG+P D NL+I+A TE+ Sbjct: 2 LTRITLPSPAKLNLFLHIVGRRPDGYHELQTLFQFLDYGDELTFTLTPEQPGIRLAEPVPGVP-DSDNLVIRAAKALAATTEN 83 The following BLAST results are available for this feature:
BLAST of DN620941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN620941 ID=DN620941; Name=DN620941; organism=Citrus sinensis; type=EST; length=515bpback to top |