CX047542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047542 vs. ExPASy Swiss-Prot
Match: TCPE_ARATH (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana GN=At1g24510 PE=2 SV=1) HSP 1 Score: 416.387 bits (1069), Expect = 1.080e-115 Identity = 209/226 (92.48%), Postives = 221/226 (97.79%), Query Frame = 1 Query: 7 LMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSEY 684 LMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAG+VREKSFGTT++RMLYIEHCANS+AVT+FIRGGNKMMIEETKRSIHDALCVARNLIRN SIVYGGGAAEIACS+AVDAAAD+YPGVEQYAIRAFA+ALD++PMALAENSGLQPIETLSAVK+QQI+EN P GIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS SEY Sbjct: 310 LMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGVVREKSFGTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGGAAEIACSLAVDAAADKYPGVEQYAIRAFAEALDSVPMALAENSGLQPIETLSAVKSQQIKENIPFYGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISNSEY 535
BLAST of CX047542 vs. ExPASy Swiss-Prot
Match: TCPE2_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 401.749 bits (1031), Expect = 2.752e-111 Identity = 201/226 (88.94%), Postives = 216/226 (95.58%), Query Frame = 1 Query: 7 LMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSEY 684 LM R LPAVRWVGGVELELIAIATGGRIVPRFQEL+ EKLGKAGLVREKSFGTT+DRMLYIE CANS+AVTIFIRGGNKMMIEETKRSIHDALCVARNLI NNSIVYGGG+AEI+CSIAV+AAADR+PGVEQYAIRAFADALDAIP+ALAENSGL PI+TL+ VK+Q ++ENN CGIDCNDVGTNDM+EQNVFETLIGKQQQILLATQVVKMILKIDDVI+PSEY Sbjct: 310 LMQRELPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGLVREKSFGTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKENNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVITPSEY 535
BLAST of CX047542 vs. ExPASy Swiss-Prot
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 401.749 bits (1031), Expect = 2.752e-111 Identity = 201/226 (88.94%), Postives = 216/226 (95.58%), Query Frame = 1 Query: 7 LMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSEY 684 LM R LPAVRWVGGVELELIAIATGGRIVPRFQEL+ EKLGKAGLVREKSFGTT+DRMLYIE CANS+AVTIFIRGGNKMMIEETKRSIHDALCVARNLI NNSIVYGGG+AEI+CSIAV+AAADR+PGVEQYAIRAFADALDAIP+ALAENSGL PI+TL+ VK+Q ++ENN CGIDCNDVGTNDM+EQNVFETLIGKQQQILLATQVVKMILKIDDVI+PSEY Sbjct: 310 LMQRELPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGLVREKSFGTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKENNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVITPSEY 535
BLAST of CX047542 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 2.506e-88 Identity = 160/225 (71.11%), Postives = 192/225 (85.33%), Query Frame = 1 Query: 7 LMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 681 L+ NLPAVRWVGG E+ELIAIATGGRIVPRF ELT EKLG AGLV+E SFGTT+D+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYGGGAAEI+C++AV AD+ P +EQYA+RAFADAL+ IPMAL+ENSG+ PI+T++ V+ +Q++E NP GIDC GTNDM++Q+V ETLIGK+QQI LATQ+V+MILKIDD+ P E Sbjct: 314 LLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538
BLAST of CX047542 vs. ExPASy Swiss-Prot
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 2.506e-88 Identity = 160/225 (71.11%), Postives = 192/225 (85.33%), Query Frame = 1 Query: 7 LMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 681 L+ NLPAVRWVGG E+ELIAIATGGRIVPRF ELT EKLG AGLV+E SFGTT+D+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYGGGAAEI+C++AV AD+ P +EQYA+RAFADAL+ IPMAL+ENSG+ PI+T++ V+ +Q++E NP GIDC GTNDM++Q+V ETLIGK+QQI LATQ+V+MILKIDD+ P E Sbjct: 314 LLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538
BLAST of CX047542 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 9.524e-88 Identity = 159/225 (70.67%), Postives = 191/225 (84.89%), Query Frame = 1 Query: 7 LMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 681 L+ NLPAVRWVGG E+ELIAIATGGRIVPRF ELT EKLG AGLV+E SFGTT+D+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYGGGAAE +C++AV AD+ P +EQYA+RAFADAL+ IPMAL+ENSG+ PI+T++ V+ +Q++E NP GIDC GTNDM++Q+V ETLIGK+QQI LATQ+V+MILKIDD+ P E Sbjct: 314 LLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAETSCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538
BLAST of CX047542 vs. ExPASy Swiss-Prot
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus GN=Cct5 PE=1 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 4.727e-87 Identity = 158/225 (70.22%), Postives = 191/225 (84.89%), Query Frame = 1 Query: 7 LMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 681 L+ LPAVRWVGG E+ELIAIATGGRIVPRF ELT EKLG AG+VRE SFGTT+D+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYGGGAAEI+C++AV AD+ P +EQYA+RAFADAL+ IPMAL+ENSG+ PI+T++ V+ +Q++E+NP GIDC G+NDM+ Q+V ETLIGK+QQI LATQ+V+MILKIDD+ P E Sbjct: 314 LLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVREISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538
BLAST of CX047542 vs. ExPASy Swiss-Prot
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus GN=Cct5 PE=1 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 1.796e-86 Identity = 157/225 (69.78%), Postives = 191/225 (84.89%), Query Frame = 1 Query: 7 LMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 681 L+ LPAVRWVGG E+ELIAIATGGRIVPRF ELT EKLG AG+V+E SFGTT+D+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYGGGAAEI+C++AV AD+ P +EQYA+RAFADAL+ IPMAL+ENSG+ PI+T++ V+ +Q++E+NP GIDC G+NDM+ Q+V ETLIGK+QQI LATQ+V+MILKIDD+ P E Sbjct: 314 LLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVQEISFGTTKDKMLVIEKCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538
BLAST of CX047542 vs. ExPASy Swiss-Prot
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum GN=cct5 PE=3 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 8.343e-84 Identity = 151/221 (68.33%), Postives = 182/221 (82.35%), Query Frame = 1 Query: 7 LMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 669 L+ NLPAVRWVGG++LE IA+ATGGRIV RF++++ +KLG+AGLVRE FGTTQDR L IE C N+ AVTIF+RGGNKM++EE KRSIHDALCV RNLIR+N ++YGGG++EI+C + + A AD +EQYA+RAFADALDAIP+ALAENSGL IE+LS VK QI+E NP GIDCN TNDM+ Q+VF+TL GK QQ LLA QVVKMILKIDD+I Sbjct: 310 LLQNNLPAVRWVGGLDLEKIAMATGGRIVARFEDVSADKLGRAGLVREVGFGTTQDRYLSIEDCPNTNAVTIFVRGGNKMIVEEAKRSIHDALCVTRNLIRDNRVIYGGGSSEISCGLKISAMADDIASIEQYAVRAFADALDAIPLALAENSGLPSIESLSTVKAMQIKEKNPRLGIDCNHRDTNDMKAQHVFDTLPGKTQQFLLANQVVKMILKIDDII 530
BLAST of CX047542 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 7.809e-82 Identity = 143/221 (64.71%), Postives = 186/221 (84.16%), Query Frame = 1 Query: 7 LMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 669 L+ NLPAVRWVGG E+ELIAIAT GRIVPRF++L+ +KLG AG+VRE SFGTT+D++L IE CANSRAVT+F+RG NKM+++E KR++HDALCV RNLIR+N +VYGGGAAEI+CS+AV A++ PG++QY++ AFADALD IP+ALAENSGL IE L+AVK + ++EN GIDC G+NDMR+Q V + LIGK+QQ+LLATQ+ +M+LK++D+I Sbjct: 316 LLQNNLPAVRWVGGPEIELIAIATNGRIVPRFEDLSSDKLGSAGIVREVSFGTTRDKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEISCSLAVTKEAEKIPGIDQYSMGAFADALDTIPLALAENSGLSSIEALTAVKARHVKENKAYLGIDCLQTGSNDMRKQFVIDPLIGKKQQLLLATQLCRMVLKVNDII 536 The following BLAST results are available for this feature:
BLAST of CX047542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047542 ID=CX047542; Name=CX047542; organism=Citrus sinensis; type=EST; length=879bpback to top |