CX047415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047415 vs. ExPASy Swiss-Prot
Match: CSGA_MYXXA (C-factor OS=Myxococcus xanthus GN=csgA PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.023e-17 Identity = 55/177 (31.07%), Postives = 96/177 (54.24%), Query Frame = -1 Query: 268 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGSGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLTKSVSVEFGRKKDPVICILLHPGTVDTDLSRPFQRNVPEGKLFTKEFSVQKLLNIINNVKSHDNGKFFAWDGQEIPW 798 G +++LIN +G+ + L V+ + + + +NA+GP+ V M P L+ G + VA++++R+GS+ N GG ++YR SKAALN +S+S + + + + +LLHPG V TD+ P +P SV+ +L +I+ + +G+FF + G E+PW Sbjct: 11 GPVDVLINNAGVSGL------WCALGDVDYADMARTFTINALGPLRVTSAMLPGLRQGA------LRRVAHVTSRMGSLAANTDGGAYAYRMSKAALNMAVRSMSTDL--RPEGFVTVLLHPGWVQTDMGGP-DATLPAPD------SVRGMLRVIDGLNPEHSGRFFDYQGTEVPW 166
BLAST of CX047415 vs. ExPASy Swiss-Prot
Match: YCP9_SCHPO (Uncharacterized oxidoreductase C663.09c OS=Schizosaccharomyces pombe GN=SPCC663.09c PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.960e-16 Identity = 64/209 (30.62%), Postives = 103/209 (49.28%), Query Frame = -1 Query: 268 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGSGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLTKSVSVEFGRKKDPVICILLHPGTVDTDLS----RPFQRNVPEGKLFTK------EFSVQKLLNIINNVKSHDNGKFFAWDGQEIPW 864 ++LD+T + + +A+S+ + +++L SGI Q T+ + + Y+ N +GPI V K PLL ++ V S+ GS+GD R G+ +Y SKAA+N K +SVE + I I HPG V TD++ + F PE + K E SV +L +++N+K +NG F+ +DG IP+ Sbjct: 59 VELDVTSQQSANEAAQSVAKAVDGIDVLWLNSGIC------QSYYTVMEAPEEVWNAHYQTNVLGPIHVFKAFYPLLT------KKKTRQVIFTSSECGSMGDFRATGFSAYGQSKAAINFTMKELSVELADEHFTFISI--HPGVVKTDMNADAIKKFTETSPEMLTYLKKVTIIPEESVSSMLKVVDNLKPENNGSFYRYDGTIIPF 253
BLAST of CX047415 vs. ExPASy Swiss-Prot
Match: YJNK_SCHPO (Uncharacterized oxidoreductase C24B10.20 OS=Schizosaccharomyces pombe GN=SPCC24B10.20 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13 Identity = 58/210 (27.62%), Postives = 104/210 (49.52%), Query Frame = -1 Query: 268 VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGSGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLTKSVSVEFGRKKDPVICILLHPGTVDTDL----SRPFQRNVPE------GKLFTKEFSVQKLLNIINNVKSHDNGKFFAWDGQEIPW 867 +++LD+T + + +A +++ +++L SGI QP + K M Y+ N +GPI V + LLK G +++ ++++A +G + N + +Y SKAALN K +S E +KD + + +HPG V+TD+ + PE + E S +L I++N+K+ DNG F+ DG ++P+ Sbjct: 59 IIKLDVTSLRSAKDAAMQVEKVVKCIDVLWVNSGI---SKSFQP---VLKTSDELWMSHYQTNVLGPIHVYQAFYHLLKEGKL---KNIVFTSSMAACMGGVRPNT---YSAYGQSKAALNYTMKEISFEL--EKDGFVVVSIHPGVVNTDMFVNAMQKLASKYPEMVESIKSNAISPEQSASSMLKIVDNLKTEDNGMFYNLDGTKLPF 254
BLAST of CX047415 vs. ExPASy Swiss-Prot
Match: YCP6_SCHPO (Uncharacterized oxidoreductase C663.06c OS=Schizosaccharomyces pombe GN=SPCC663.06c PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12 Identity = 62/212 (29.25%), Postives = 100/212 (47.17%), Query Frame = -1 Query: 268 VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGSGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLTKSVSVEFGRKKDPVICILLHPGTVDTDLSRPFQRNVPEGK-----LFTKEF-----SVQKLLNIINNVKSHDNGKFFAWDGQEIPW 867 +++LD++ + +A+ + + G +++L SGI N + P+ N Y+ N +GPI V + PL+K G S I + S+ VGS+G Y SKAALN K +S E + + I I +HPG V TD ++ E K +F K+ S +L +++N+K +NG FF +DG IP+ Sbjct: 58 IIKLDISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNS--------HYKTNVLGPIHVYQAFYPLVKKGESKI------IVFTSSLVGSMGAFFPFNQSGYGQSKAALNFTMKEISFEL--QDEGFIVISIHPGMVRTDSAQEAVNQHAEAKPEILDIFAKQALAPDQSASDMLKVVDNLKPENNGFFFNYDGTTIPY 253
BLAST of CX047415 vs. ExPASy Swiss-Prot
Match: YCP8_SCHPO (Uncharacterized oxidoreductase C663.08c OS=Schizosaccharomyces pombe GN=SPCC663.08c PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.519e-12 Identity = 61/212 (28.77%), Postives = 102/212 (48.11%), Query Frame = -1 Query: 268 VLQLDLTVESTIEASAKSIKEKYGSLNLL-INASGILSI-PNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGSGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLTKSVSVEFGRKKDPVICILLHPGTVDTDLSRPFQRNVPEGK-----LFTK-----EFSVQKLLNIINNVKSHDNGKFFAWDGQEIPW 867 +++LD++ + +A+ + + ++++L +N++ S P V P+ N Y+ N +GPI V + PL+K G S I + S+ GS+G +Y SKAALN K +S E + + I I +HPG V TD ++ E K LF K E S +L +++N+K +NG F+ +DG IP+ Sbjct: 58 IIKLDVSSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNS--------HYKTNVLGPIHVYQAFYPLIKKGRSKI------IVFTSSLAGSMGAFFPSSQSAYGQSKAALNYTMKEISFEL--QDEGFIVISIHPGAVRTDSAQEIVNQHAEKKPEILDLFAKQALTPEKSASDMLKVVDNLKPENNGLFYNYDGTIIPF 253
BLAST of CX047415 vs. ExPASy Swiss-Prot
Match: YKH1_YEAST (Uncharacterized oxidoreductase YKL071W OS=Saccharomyces cerevisiae GN=YKL071W PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.113e-11 Identity = 61/211 (28.91%), Postives = 98/211 (46.45%), Query Frame = -1 Query: 277 ERLDVLQLDLTVESTIEASAKSIKEK--YGSLNLLINASGIL-SIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGSGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQLTKSVSVEFGRKKDPVICILLHPGTVDTDLSRPFQRNVPEGKL-------FTKEFSVQKLLNIINNVKSHDNGKFFAWDGQE 879 + + ++QLDLT + +I A IK+ + +++ I S + S VL+ KS + Y NA+GPIL ++ + PLL + + + +S+ GSI +Y SKAALN K++S E K + + HPG V TD+ + + E + T E S L+++ + DNGKFF +DG E Sbjct: 58 KNIHIVQLDLTKDESIGNIADEIKKTPFFLGIDIFIACSAVSDSYYKVLE-------TPKSVWLNHYSTNALGPILALQKVYPLLLL------KKTRKIFFISSVAGSINAFVPLSVSAYGQSKAALNYAVKTLSFEL--KPEGFTVVAFHPGMVSTDMGQYGLDHFKEKNIDISGVNIITPEESASALIDVFRKILPEDNGKFFNYDGSE 253 The following BLAST results are available for this feature:
BLAST of CX047415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047415 ID=CX047415; Name=CX047415; organism=Citrus sinensis; type=EST; length=879bpback to top |