CX047085

Overview
NameCX047085
Unique NameCX047085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: Y4523_ARATH (Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 4.120e-109
Identity = 189/209 (90.43%), Postives = 198/209 (94.74%), Query Frame = 2
Query:  221 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            F+EFS ADL+AATNNFSSD IVSESGEKAPN+VYKGRLQ    NRRWIAVKKFTK AWP+PKQFA+EAWGVGKLRH RLANLIGYCCDGDERLLVAE+MPNDTLAKHLFHWENQTIEWAMRLRV  YIAEALDYCS+EGRPLYHDLNAYRVLFDE+GDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESV +SFGTVLLDL
Sbjct:   58 FSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQ----NRRWIAVKKFTKMAWPEPKQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVTYSFGTVLLDL 262          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: Y5126_ARATH (Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.973e-83
Identity = 145/209 (69.38%), Postives = 183/209 (87.56%), Query Frame = 2
Query:  221 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            F EFS+  +R AT+ F+++ IVSE GE+APNVVYKG+L+    N+R IAVK+F + +WPD +QF +EA  VG+LR+ R+ANL+G C + +ERLL+AE+MPN+TLAKHLFHWE+Q ++WAMRLRVAL+IA+AL+YC+S+GR LYHDLNAYRVLFD++ +PRLSCFGLMKNSRDGKSYSTNLA+TPPEYLR GRVTPESVI+SFGT+LLDL
Sbjct:   41 FREFSIETIRNATSGFAAENIVSEHGERAPNVVYKGKLE----NQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 245          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.302e-54
Identity = 109/207 (52.66%), Postives = 148/207 (71.50%), Query Frame = 2
Query:  227 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            +FS + L+ ATN+FS + IVS+   +  +VV+KGRLQ+G     ++A+K+F   AW DPK F +EA  VGKLRHKRL NLIGYCCDGD+R LVA++M NDTLAK LF  + QT++W++RLRVA ++AEALDYC++ G   Y++L+AY+VLFDE+GD  LSCFGLMK   +             + +  G V PE+VI+ FGTVL++L
Sbjct:   37 KFSFSALKTATNHFSPENIVSD---QTSDVVFKGRLQNGG----FVAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRLRVAYFVAEALDYCNTAGFASYNNLSAYKVLFDEDGDACLSCFGLMKEINN-------------DQITTGSVNPENVIYRFGTVLVNL 223          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.110e-29
Identity = 82/217 (37.79%), Postives = 121/217 (55.76%), Query Frame = 2
Query:  233 SLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH--AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIE---WAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-SYSTNLA----YTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            S+  LR+ TNNFSSD I+   G     VVYKG L DG      IAVK+      A     +F  E   + K+RH+ L  L+GYC DG+E+LLV EYMP  TL++HLF W  + ++   W  RL +AL +A  ++Y         ++ DL    +L  ++   +++ FGL++ + +GK S  T +A    Y  PEY   GRVT +  ++SFG +L++L
Sbjct:  577 SIQVLRSVTNNFSSDNILGSGGF---GVVYKGELHDGTK----IAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEL 786          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28
Identity = 83/221 (37.56%), Postives = 120/221 (54.30%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGN------DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-KSY-STNL----AYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            FS A+L++AT NF  D ++ E G      V+KG + + +           IAVKK  +  W   +++  E   +G+  H+ L  LIGYC + + RLLV E+MP  +L  HLF      Q + W +RL+VAL  A+ L +  SSE R +Y D     +L D   + +LS FGL K+   G KS+ ST +     Y  PEYL  G +T +S ++SFG VLL+L
Sbjct:   56 FSFAELKSATRNFRPDSVLGEGGF---GCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLEL 273          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28
Identity = 80/216 (37.04%), Postives = 118/216 (54.63%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-KSY-STNL----AYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            F+  +L AAT NF  D  + E G      VYKGRL   +   + +AVK+  ++     ++F  E   +  L H  L NLIGYC DGD+RLLV E+MP  +L  HL     + + ++W MR+++A   A+ L++   +  P  +Y D  +  +L DE   P+LS FGL K    G KS+ ST +     Y  PEY   G++T +S ++SFG V L+L
Sbjct:   74 FAFRELAAATMNFHPDTFLGEGGFGR---VYKGRL---DSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLEL 283          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.733e-27
Identity = 77/214 (35.98%), Postives = 111/214 (51.87%), Query Frame = 2
Query:  227 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDY--CSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK--NSRDGKSYST----NLAYTPPEYLRNGRVTPESVIFSFGTVLLD 844
            +F+LA++RAAT NF     +   G      VY+G L+DG      IA+K+ T H+     +F  E   + +LRH+ L +LIG+C + +E +LV EYM N TL  HLF      + W  RL   +  A  L Y    SE   ++ D+    +L DEN   ++S FGL K   S D    ST    +  Y  PEY R  ++T +S ++SFG VL +
Sbjct:  507 KFTLAEIRAATKNFDDGLAIGVGGF---GKVYRGELEDGT----LIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFE 713          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.733e-27
Identity = 77/220 (35.00%), Postives = 117/220 (53.18%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGND-------NRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS--YSTNL----AYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            F+  +L+ AT NF  D ++ E G      V+KG + DG         +   +AVKK     +   K++  E   +G+L H  L  L+GYC +G+ RLLV E+MP  +L  HLF    Q + WA+R++VA+  A+ L +   ++ + +Y D  A  +L D   + +LS FGL K    G     ST +     Y  PEY+  GR+T +S ++SFG VLL+L
Sbjct:   71 FTFNELKNATRNFRPDSLLGEGGF---GYVFKGWI-DGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLEL 286          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.500e-26
Identity = 78/221 (35.29%), Postives = 119/221 (53.85%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRW------IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWEN--QTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-KSY-STNL----AYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            F+ A+L+AAT NF  D ++ E G  +   V+KG + +             IAVKK  +  W   +++  E   +G+  H  L  LIGYC + + RLLV E+MP  +L  HLF   +  Q + W +RL+VAL  A+ L +  ++E   +Y D     +L D   + +LS FGL K+   G KS+ ST +     Y  PEYL  G +T +S ++S+G VLL++
Sbjct:   57 FTFAELKAATRNFRPDSVLGEGGFGS---VFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEV 274          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.341e-26
Identity = 76/219 (34.70%), Postives = 111/219 (50.68%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQ---DGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD----GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA------YTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            FS  +L  AT  FS   ++ E G     +VYKG++    D +D    +A+KK  +      KQ+  E   +G + H  +  LIGYC +    G ERLLV EYM N +L  HLF   + T+ W  RL + L  AE L Y   + + +Y D  +  VL D+   P+LS FGL +   DG +     A      Y  PEY++ G +  +S ++SFG VL ++
Sbjct:   74 FSYEELSKATYVFSRKLVIGEGGF---GIVYKGKILSNGDSSDPPLVVAIKKLNRQGLQGHKQWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRSHTLPWKKRLEIMLGAAEGLTYL-HDLKVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEI 288          
The following BLAST results are available for this feature:
BLAST of CX047085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
Y4523_ARATH4.120e-10990.43Probable serine/threonine-protein kinase At4g35230... [more]
Y5126_ARATH2.973e-8369.38Probable serine/threonine-protein kinase At5g41260... [more]
SSP_ARATH1.302e-5452.66Probable inactive receptor-like kinase SSP OS=Arab... [more]
TMK1_ARATH1.110e-2937.79Probable receptor protein kinase TMK1 OS=Arabidops... [more]
APK1A_ARATH2.093e-2837.56Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
PBS1_ARATH2.733e-2837.04Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
Y1357_ARATH6.733e-2735.98Probable receptor-like protein kinase At1g30570 OS... [more]
APK2B_ARATH6.733e-2735.00Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
APK1B_ARATH1.500e-2635.29Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y5707_ARATH3.341e-2634.70Probable receptor-like protein kinase At5g47070 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_12A08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A08-A15-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047085 ID=CX047085; Name=CX047085; organism=Citrus sinensis; type=EST; length=849bp
TTCAGCTGCTGAGCTGGGGGGTTTGGTTGGTTCATTTCTTCTGAGTCAAC
TCGGCCGAGTTATGGGCTGTTGCGAATCAACCTTCTTAAAAGGACACCTC
TCGGTTGATACCAAAAATCGCCACCACCACCAACAGAATCACCGCAATCA
TCCGACTCAGCCGTCTAATGGTACTGAGGGCTCAGGCGGACTCGCTGCCG
GCTCAGATGGCGCGCCGGCTTTCGCCGAGTTCTCCTTAGCCGACCTCAGA
GCCGCTACGAATAACTTCAGTTCTGATTTTATCGTATCCGAGAGCGGCGA
AAAGGCTCCCAATGTCGTCTATAAAGGCCGCCTTCAAGACGGAAATGATA
ACCGCCGTTGGATCGCCGTTAAAAAATTCACCAAACATGCCTGGCCCGAT
CCCAAACAGTTTGCTGATGAGGCTTGGGGTGTTGGGAAGCTGAGGCATAA
GAGGCTGGCGAATTTGATTGGCTATTGTTGTGATGGTGATGAGAGATTGC
TGGTGGCTGAGTACATGCCAAATGATACTCTTGCTAAACATTTATTTCAC
TGGGAGAATCAAACCATTGAGTGGGCTATGCGTCTAAGAGTTGCTCTGTA
TATTGCTGAAGCTTTAGATTATTGCAGTAGTGAAGGACGTCCATTATACC
ATGATTTGAATGCTTATAGGGTTCTCTTTGATGAGAATGGTGATCCTCGG
CTTTCATGTTTTGGCTTGATGAAAAATAGTAGGGATGGAAAAAGTTACAG
CACAAATCTTGCCTATACTCCTCCAGAGTACCTAAGAAATGGAAGGGTCA
CTCCAGAAAGTGTTATTTTCAGCTTCGGGACTGTCCTTTTGGATCTTCT
back to top