CX047082

Overview
NameCX047082
Unique NameCX047082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_PARUW (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Protochlamydia amoebophila (strain UWE25) GN=gpmA PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.183e-37
Identity = 72/118 (61.02%), Postives = 93/118 (78.81%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            LIL+RHG+S WN  NLFTG VD+PL+ KG+EEAIEAGK+I N P+D+I+TS+LIRAQMTAMLAM+ H   KVP+I+H    +   W+ I+S ++  Q+IPV+ AW LNERMYG LQG+
Sbjct:    4 LILMRHGQSQWNLANLFTGWVDIPLSFKGIEEAIEAGKQIKNYPIDLIFTSSLIRAQMTAMLAMSVHTSGKVPVILHTGEGRLEEWASIYSSESQSQTIPVIRAWELNERMYGELQGI 121          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_CHLPN (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia pneumoniae GN=gpmA PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.867e-32
Identity = 65/119 (54.62%), Postives = 91/119 (76.47%), Query Frame = 3
Query:  483 AALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            A LIL+RHG+S+WNEKNLF+G VD+PL+++G+EEA  AG+ I N+P+D I+TS L+R+ MTA+LAMT H  +K+P I+H E  +A+  S+I+S +     IP+  + ALNERMYG LQG
Sbjct:    2 ALLILLRHGQSVWNEKNLFSGWVDIPLSQQGIEEAFSAGRAIQNLPIDCIFTSTLVRSLMTALLAMTNHHSKKIPYIVH-EDPKAKEMSRIYSAEEENNMIPLYQSSALNERMYGELQG 119          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_CHLCV (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydophila caviae GN=gpmA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.998e-31
Identity = 67/119 (56.30%), Postives = 95/119 (79.83%), Query Frame = 3
Query:  483 AALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            A LIL+RHG+S+WNEKNLFTG VD+PL+++G++EAI AG+ I ++P+D I+TS+L+R+ MTA+LAMT H  +K+P I+H++ EQ +  S+I+S D  K  IP+  + ALNERMYG LQG
Sbjct:    2 AFLILLRHGKSVWNEKNLFTGWVDIPLSQQGIDEAIHAGQVIKDLPIDCIFTSSLVRSLMTALLAMTHHSSKKIPYIIHDD-EQQKLMSRIYS-DEEKSMIPLYRSSALNERMYGELQG 118          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_CHLMU (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia muridarum GN=gpmA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.408e-31
Identity = 64/117 (54.70%), Postives = 91/117 (77.78%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            LIL+RHG+S+WN+KNLFTG VD+PL+++G++EA+ AG+ I N+P+D I+TS L+R+ MTA+LAMT H  +K+P I+H   E+    S+I SE  ++Q IP+  + ALNERMYG LQG
Sbjct:    4 LILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEALTAGEAIKNLPIDCIFTSTLVRSLMTALLAMTNHSSKKIPYIIH---EERPDMSRIHSEKELEQMIPLFQSSALNERMYGELQG 117          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_CHLAB (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydophila abortus GN=gpmA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.408e-31
Identity = 66/119 (55.46%), Postives = 95/119 (79.83%), Query Frame = 3
Query:  483 AALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            A LIL+RHG+S+WNEKNLFTG VD+PL++KG++EA+ AG+ I ++P+D I+TS+L+R+ MTA+LAMT H  +K+P I+H++ EQ +  S+I+S D +   IP+  + ALNERMYG LQG
Sbjct:    2 AFLILLRHGKSVWNEKNLFTGWVDIPLSQKGIDEAMLAGEAIKDLPIDCIFTSSLVRSLMTALLAMTHHNSKKIPYIVHDDPEQ-KHMSKIYS-DEVNHMIPLYRSSALNERMYGELQG 118          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_CHLTB (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=gpmA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.593e-31
Identity = 65/117 (55.56%), Postives = 91/117 (77.78%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            LIL+RHG+S+WN+KNLFTG VD+PL+++G++EAI AG+ I ++P+D I+TS L+R+ MTA+LAMT H  +KVP I+H   E+    S+I S+  M+Q IP+  + ALNERMYG LQG
Sbjct:    4 LILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEAIAAGESIKHLPIDCIFTSTLVRSLMTALLAMTNHSSQKVPYIVH---EERPDMSRIHSQKEMEQMIPLFQSSALNERMYGELQG 117          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_CHLT2 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=gpmA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.593e-31
Identity = 65/117 (55.56%), Postives = 91/117 (77.78%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            LIL+RHG+S+WN+KNLFTG VD+PL+++G++EAI AG+ I ++P+D I+TS L+R+ MTA+LAMT H  +KVP I+H   E+    S+I S+  M+Q IP+  + ALNERMYG LQG
Sbjct:    4 LILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEAIAAGESIKHLPIDCIFTSTLVRSLMTALLAMTNHSSQKVPYIVH---EERPDMSRIHSQKEMEQMIPLFQSSALNERMYGELQG 117          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_CHLFF (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydophila felis (strain Fe/C-56) GN=gpmA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.593e-31
Identity = 67/119 (56.30%), Postives = 95/119 (79.83%), Query Frame = 3
Query:  483 AALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            A LIL+RHG+S+WNEKNLFTG VD+PL++KG++EAI AG+ I ++P+D I+TS+L+R+ MTA+LAMT H  +KVP I+H ++ Q +  S+I+SE+  +  IP+  + ALNERMYG LQG
Sbjct:    2 AFLILLRHGKSVWNEKNLFTGWVDIPLSQKGIDEAILAGQVIKDLPIDCIFTSSLVRSLMTALLAMTHHSSKKVPYIIH-DAPQQKQMSRIYSEEE-QHMIPLYRSSALNERMYGELQG 118          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_CHLTR (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia trachomatis GN=gpmA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.209e-30
Identity = 64/117 (54.70%), Postives = 91/117 (77.78%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            LIL+RHG+S+WN+KNLFTG VD+PL+++G++EAI AG+ I ++P+D I+TS L+R+ +TA+LAMT H  +KVP I+H   E+    S+I S+  M+Q IP+  + ALNERMYG LQG
Sbjct:    4 LILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEAIAAGESIKHLPIDCIFTSTLVRSLITALLAMTNHSSQKVPYIVH---EERPDMSRIHSQKEMEQMIPLFQSSALNERMYGELQG 117          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_CHLTA (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=gpmA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.209e-30
Identity = 64/117 (54.70%), Postives = 91/117 (77.78%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            LIL+RHG+S+WN+KNLFTG VD+PL+++G++EAI AG+ I ++P+D I+TS L+R+ +TA+LAMT H  +KVP I+H   E+    S+I S+  M+Q IP+  + ALNERMYG LQG
Sbjct:    4 LILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEAIAAGESIKHLPIDCIFTSTLVRSLITALLAMTNHSSQKVPYIVH---EERPDMSRIHSQKEMEQMIPLFQSSALNERMYGELQG 117          
The following BLAST results are available for this feature:
BLAST of CX047082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
GPMA_PARUW3.183e-3761.022,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLPN6.867e-3254.622,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLCV1.998e-3156.302,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLMU3.408e-3154.702,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLAB3.408e-3155.462,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLTB7.593e-3155.562,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLT27.593e-3155.562,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLFF7.593e-3156.302,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLTR2.209e-3054.702,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLTA2.209e-3054.702,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A07-A13-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047082 ID=CX047082; Name=CX047082; organism=Citrus sinensis; type=EST; length=843bp
GAACGAAGGTTTCACTTTCGCTTTCCCTCTTGCCTTGTGTTTGTTGCACT
TTAGTACTTAAATATTTTTGCCAGTTGAAAATGGACATGTAAAATTCCAA
CTTCTATATAATCACCTCCATCTTCTTCTCCGTCAACTTTCTTCATTATT
AGTCTCATTTGCTATTTCCTGCCTCGGTTTCTTCGCTCGGTTCCCGTCTA
TATAAAATGTCTGCACAGGTATTTCACCAAGCTATGGGGACTCTCCAATC
CAATCGACTTCTTAACAACTCTGGCACTCACCATGAACTTGGAAATATTA
GGGTGCAATTGATTCCAAAATGTTTCAAGCTTAATATTGAATTGTCAAGA
AACAGGAATTTTAGATTTGGGAAGAAGAATTTTGGCATAATTCAGGCCAC
AGCTTCTCAAACTTCAGTTATTGAATCTGCTTCATCTCCCTCAAATCACG
ACACCAGTGACTCCAAAAAGAAATCAAATGAAGCAGCTTTGATACTGGTT
CGACATGGTGAGTCTCTCTGGAATGAAAAGAACCTGTTTACAGGTTGCGT
TGATGTGCCATTAACCAAGAAGGGTGTAGAAGAGGCAATTGAAGCTGGAA
AGAGAATAAGCAACATACCTGTCGACATGATATATACATCAGCACTAATT
CGCGCGCAGATGACTGCTATGCTCGCCATGACACAGCACCGACGCAGGAA
GGTCCCTATCATTATGCATAATGAAAGTGAACAGGCAAGGACCTGGAGTC
AGATCTTCAGCGAAGACACCATGAAGCAGTCCATTCCCGTTGTAACAGCT
TGGGCATTGAATGAAAGAATGTATGGGTAATTACAGGGTCTAA
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