CX046903
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2) HSP 1 Score: 322.398 bits (825), Expect = 1.745e-87 Identity = 147/167 (88.02%), Postives = 158/167 (94.61%), Query Frame = 3 Query: 294 SKHAVDNPDEIA----SMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKP 782 ++HAV NPDE+A ++ EMS RN TERRKLGYF+CGTGNPIDDCWRCD NWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDD+PVNP+PGTLRHAVIQD+PLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVI+HGLH+HDCKP Sbjct: 41 NQHAVTNPDEVADEVLALTEMSVRNHTERRKLGYFTCGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKP 207
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 2.134e-85 Identity = 158/246 (64.23%), Postives = 190/246 (77.24%), Query Frame = 3 Query: 126 TQRGICLCFAVVLMLFVSVLASVRNEQDVSVSRKMKAE---SSMNSTMAAKAEVVAEALS-------------------KHAV-DNPD----EIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKP 782 +Q+ I +C AV+++L ++ A + ++S+SRK+K E SS +STMAA ++ E +HAV D+PD E+A +V+MS +N T RRKLG+FSCGTGNPIDDCWRCD NWHKNRKRLADCGIGFGRNAIGGRDGRFY+VTDP D+D VNPKPGTLRHAVIQ++PLWIVFKRDMVI+LKQELI+NSFKTID RG+NVHIANG CITIQF+TNVIIHGLH+HDCKP Sbjct: 5 SQKLISVCVAVLVVL--ALTAMIFRNSEISLSRKLKTEVIQSSNSSTMAAIRKLKTEEFQSLNSSTMAATRLDGEPQQQQHAVADDPDMVADEVAKLVQMSEQNRTARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKP 248
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 4.919e-82 Identity = 136/166 (81.93%), Postives = 150/166 (90.36%), Query Frame = 3 Query: 285 EALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKP 782 E +HAV+NPDE+A+MV+MS RNSTERR+LGYFSC TGNPIDDCWRCD W RKRLADC IGFGRNAIGGRDGRFYVVTDP DDDPVNP PGTLRHAVIQD+PLWI+FKRDMVI LKQELI+NSFKTIDGRG NVHIANG C+TIQ+VTN+I+HG+HVHDCKP Sbjct: 29 ETWHEHAVENPDEVAAMVDMSIRNSTERRRLGYFSCATGNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHDCKP 194
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 2.285e-79 Identity = 140/222 (63.06%), Postives = 166/222 (74.77%), Query Frame = 3 Query: 117 MAVTQRGICLCFAVVLMLFVSVLASVRNEQDVSVSRKMKAESSMNSTMAAKAEVVAEALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKP 782 MAVTQ + A++L +F + + S R+ E +HAV+NP+E+A+MV+MS RNST RR+LGYFSC TGNPIDDCWRCD W RK LA+C IGFGRNAIGGRDGR+YVV+DP DD+PVNPKPGTLRHAVIQ++PLWIVFKRDMVI LK+ELI+NSFKTIDGRG NVHIANG CITIQFVTN+IIHG+H+HDC+P Sbjct: 1 MAVTQILVVFASALLLSMFFTGVDSTRSN---------------------------ETWHEHAVENPEEVAAMVDMSIRNSTARRRLGYFSCSTGNPIDDCWRCDRRWQSRRKHLANCAIGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPGTLRHAVIQEEPLWIVFKRDMVITLKEELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGIHIHDCRP 195
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2) HSP 1 Score: 290.426 bits (742), Expect = 7.351e-78 Identity = 137/221 (61.99%), Postives = 169/221 (76.47%), Query Frame = 3 Query: 117 MAVTQRGICLCFAVVLMLFVSVLASVRNEQDVSVSRKMKAESSMNSTMAAKAEVVAEALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCK 779 M + R +++L + + +S ++ + + + SS NS+ A K A ++HAV NP+E+A+MV+M +NSTERR+LG+FSC TGNPIDDCWRCD NWH RKRLA+C IGFGRNAIGGRDGR+YVVTDP D D VNP+PGTLRHAVIQD+PLWIVFKRDMVI L QELI+NSFKTIDGRG NV IA G CITIQ+VTN+IIHG++VHDC+ Sbjct: 1 MVIFSRSFLALSTTLIILALCINSSTMAQE----TEDLNSHSSSNSSTANKLPNDDGAWNEHAVKNPEEVAAMVDMKIKNSTERRRLGFFSCATGNPIDDCWRCDRNWHLRRKRLANCAIGFGRNAIGGRDGRYYVVTDPSDHDAVNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSFKTIDGRGVNVAIAGGACITIQYVTNIIIHGINVHDCR 217
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 5.268e-76 Identity = 140/220 (63.64%), Postives = 171/220 (77.73%), Query Frame = 3 Query: 147 CFAVVLMLFVSVLASVRN--EQDVSVSRKMKAESSMN---STMAAKAEVVAEALSKHAVDNPD----EIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCK 779 CF V+L +FV + + N ++S SRK+K E S + S M + + V E L++HAV +PD E+++++ MS +N T RRKLG+FSCG GN IDDCWRCD NW+KNRK LADCG+GFG A GGR+G +YVVTD DDD VNPKPGTLRHAVIQ +PLWI+FKRDMVI+LKQELI+NSFKTID RGANVHIANG CITIQ +TNVI+HGLH+HDCK Sbjct: 12 CF-VLLFIFVGCVLTATNLRNNEISRSRKLKTEDSKSFNSSPMTTRLDGVVE-LNEHAVTDPDKVAHEVSNLIHMSEQNITARRKLGFFSCGNGNLIDDCWRCDRNWNKNRKHLADCGMGFGSKAFGGRNGSYYVVTDHSDDDVVNPKPGTLRHAVIQVEPLWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACITIQNITNVIVHGLHIHDCK 229
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 5.824e-75 Identity = 125/162 (77.16%), Postives = 145/162 (89.51%), Query Frame = 3 Query: 297 KHAVDNPDEIASMVEMSTRNSTERRKLGYFS-CGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCK 779 +HAV +P+EIA+MV+MS RNST RRKLG+FS C TGNPIDDCWRCD WH+ RKRLADC IGFGRNA+GGRDGR+Y+VTDP D DPV PKPGTLR+AVIQD+PLWIVFKRDMVI L QELI+NSFKTIDGRG NVHIA G C+T+Q+VTN+IIHG+++HDCK Sbjct: 34 EHAVKDPEEIAAMVDMSIRNSTYRRKLGFFSSCSTGNPIDDCWRCDKKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCK 195
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 8.703e-71 Identity = 117/158 (74.05%), Postives = 137/158 (86.71%), Query Frame = 3 Query: 306 VDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCK 779 V +P+ + V S RRKLG+FSCG+GNPIDDCWRCD +W KNRKRLADCGIGFG+NAIGGRDG YVVTDP +DDPVNP+PGTLR+AVIQD+PLWI+FKRDM IQLK+ELI+NSFKT+DGRGA+VHI+ G CITIQ+VTN+IIHGLH+HDCK Sbjct: 50 VSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCK 207
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2) HSP 1 Score: 250.751 bits (639), Expect = 6.454e-66 Identity = 112/159 (70.44%), Postives = 135/159 (84.91%), Query Frame = 3 Query: 306 VDNPDEIASMVEMSTRNSTE-RRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCK 779 V +P+ + V S S RRKLGY SC TGNPIDDCWRCD +W ++R+RLADC IGFG+NAIGGRDGR YVVTD +D+PV+PKPGTLRHAV+QD+PLWI+F+RDM IQLK+ELI+NSFKTIDGRGA+VHI+ G CITIQ+VTN+IIHG+H+HDCK Sbjct: 27 VPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCK 185
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL_ZINEL (Pectate lyase OS=Zinnia elegans PE=1 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.453e-65 Identity = 112/155 (72.26%), Postives = 129/155 (83.23%), Query Frame = 3 Query: 315 PDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCK 779 P I + V S S RR LGY SCGTGNPIDDCWRCD NW NR+RLADC IGFG+NA+GGR+GR YVVTDP +DDPVNP PGTLR+AVIQD+PLWI+FKRDMVIQL+QEL++NS KTIDGRG NVHI NG CITI + +N+IIHG+H+HDCK Sbjct: 26 PHAIVNEVHKSINAS--RRNLGYLSCGTGNPIDDCWRCDPNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDEPLWIIFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHDCK 178 The following BLAST results are available for this feature:
BLAST of CX046903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046903 ID=CX046903; Name=CX046903; organism=Citrus sinensis; type=EST; length=782bpback to top |