CX046894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046894 vs. ExPASy Swiss-Prot
Match: DPOLL_MACFA (DNA polymerase lambda OS=Macaca fascicularis GN=POLL PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30 Identity = 74/217 (34.10%), Postives = 119/217 (54.84%), Query Frame = -1 Query: 264 RTLDDLKNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKGFLSKYVKKLKEMKFLREDLIFSTHSEE-----------------------VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 845 R+L+D++++ SLT Q +GLK+++D R+PR E ++E+ +QKA + ++ + GSYRRGKA+CGD+DV+I HPD +SH+G S+ + L++ FL +DL+ + + V P +A L+ +TG+ NR +R LA++KG L + L A + + L TEK+VF LG P+ EP ER+ Sbjct: 358 RSLEDIRSQASLTTQQAIGLKHYNDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGPGWRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKMGPGRVLPTPTEKDVFRLLGLPYREPAERD 574
BLAST of CX046894 vs. ExPASy Swiss-Prot
Match: DPOLL_HUMAN (DNA polymerase lambda OS=Homo sapiens GN=POLL PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30 Identity = 75/217 (34.56%), Postives = 118/217 (54.38%), Query Frame = -1 Query: 264 RTLDDLKNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKGFLSKYVKKLKEMKFLREDLIFSTHSEE-----------------------VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 845 R+L+D++++ SLT Q +GLK++ D R+PR E ++E+ +QKA + ++ + GSYRRGKA+CGD+DV+I HPD +SH+G S+ + L++ FL +DL+ + + V P +A L+ +TG+ NR +R LA++KG L + L A + V L TEK+VF LG P+ EP ER+ Sbjct: 358 RSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERD 574
BLAST of CX046894 vs. ExPASy Swiss-Prot
Match: DPOLL_RAT (DNA polymerase lambda OS=Rattus norvegicus GN=Poll PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.103e-29 Identity = 73/217 (33.64%), Postives = 117/217 (53.92%), Query Frame = -1 Query: 264 RTLDDLKNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKGFLSKYVKKLKEMKFLREDLIFSTHSEE-----------------------VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 845 R+L+D++ SLT Q +GLK++DD R+PR E ++E++++ + + P ++ + GS+RRGK +CGD+DV+I HPD +SH+G S + L++ FL +DL+ + + V P +A L+ +TG+ NR +R LA++KG L + L A + V A L TEK+VF LG P+ EP ER+ Sbjct: 356 RSLEDIRGLASLTAQQAIGLKHYDDFLDRMPREEAAEIEQMVRVSAQAFNPGLLCVACGSFRRGKVTCGDVDVLITHPDGRSHQGIFSPLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGAGQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRNSQGVKVGAGQVLPTPTEKDVFKLLGLPYREPAERD 572
BLAST of CX046894 vs. ExPASy Swiss-Prot
Match: DPOLL_MOUSE (DNA polymerase lambda OS=Mus musculus GN=Poll PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.220e-28 Identity = 74/217 (34.10%), Postives = 115/217 (53.00%), Query Frame = -1 Query: 264 RTLDDLKNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKGFLSKYVKKLKEMKFLREDLIFSTHSEE-----------------------VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 845 R L+DL++ SLT Q +GLK++DD R+PR E ++E+ ++ + + P ++ + GSYRRGK +CGD+DV+I HPD +SH+G S + L++ FL +DL+ + + V P +A L+ +TG+ NR +R LA++KG L + L A + V L TEK+VF LG P+ EP ER+ Sbjct: 356 RNLEDLQSLGSLTAQQAIGLKHYDDFLDRMPREEAAEIEQTVRISAQAFNPGLLCVACGSYRRGKMTCGDVDVLITHPDGRSHRGIFSCLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGPGKRHRRLDIIVVPYCEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRNSQGVKVGPGQVLPTPTEKDVFKHLGLPYREPAERD 572
BLAST of CX046894 vs. ExPASy Swiss-Prot
Match: DPOLB_RAT (DNA polymerase beta OS=Rattus norvegicus GN=Polb PE=1 SV=4) HSP 1 Score: 120.168 bits (300), Expect = 1.491e-26 Identity = 74/221 (33.48%), Postives = 125/221 (56.56%), Query Frame = -1 Query: 264 RTLDDL-KNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKG----FLSKYVKKLKEMKFLREDL------------IFSTHSEEVY----------PRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 845 +TL+DL KNED L H QR+GLKYF+D + RIPR E+ QM+ ++ +++ PE I GS+RRG S GD+DV++ HP+ S L + V++L++++F+ + L + S + E Y P+D Y G++ +TG+D+ N+ +R A KG+ +++ + P G GV A L D+E+++FD++ + + EP +R+ Sbjct: 120 KTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSENDENEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPL-----GVTGV-AGEPLPVDSEQDIFDYIQWRYREPKDRS 334
BLAST of CX046894 vs. ExPASy Swiss-Prot
Match: DPOLB_BOVIN (DNA polymerase beta OS=Bos taurus GN=POLB PE=2 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 1.491e-26 Identity = 75/221 (33.94%), Postives = 124/221 (56.11%), Query Frame = -1 Query: 264 RTLDDL-KNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKG----FLSKYVKKLKEMKFLREDL------------IFSTHSEEVY----------PRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 845 +TL+DL KNED L H QR+GLKYF+D + RIPR E+ QM+ ++ ++V E I GS+RRG S GD+DV++ HP S L + V++L++++F+ + L + S + E+ Y P+D Y G++ +TG+D+ N+ +R A KG+ +++ + P G GV A L D+EK++FD++ + + EP +R+ Sbjct: 120 KTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLSEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPL-----GVTGV-AGEPLPVDSEKDIFDYIQWKYREPKDRS 334
BLAST of CX046894 vs. ExPASy Swiss-Prot
Match: DPOLB_XENLA (DNA polymerase beta OS=Xenopus laevis GN=polb PE=1 SV=3) HSP 1 Score: 118.627 bits (296), Expect = 4.338e-26 Identity = 73/220 (33.18%), Postives = 119/220 (54.09%), Query Frame = -1 Query: 264 RTLDDLKN-EDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKG----FLSKYVKKLKEMKFLREDLI-----------FSTHSEEVY----------PRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 845 +TLDDL+N E L H Q++GLK+FDD + RIPR E+ QM+ ++ + PE I GS+RRG S GD+D+++ HPD S L + V+ L++ F+ + L+ S++ Y P+D Y G++ +TG+D+ N+ +R A KG+ L++ L P G G+ A L D+EK++FD++ + + EP +R+ Sbjct: 120 KTLDDLRNNEHKLNHHQKIGLKHFDDFEKRIPRKEMLQMQEIILDKVNNLDPEYIATVCGSFRRGAESSGDMDILLTHPDFTSESAKQPRLLHQVVQCLEDCNFITDTLVKGDTKFMGVCQLPCESDQDYPYRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTLRPL-----GVTGI-AGEPLPIDSEKDIFDYIQWKYREPKDRS 333
BLAST of CX046894 vs. ExPASy Swiss-Prot
Match: DPOLB_HUMAN (DNA polymerase beta OS=Homo sapiens GN=POLB PE=1 SV=3) HSP 1 Score: 116.701 bits (291), Expect = 1.648e-25 Identity = 75/221 (33.94%), Postives = 122/221 (55.20%), Query Frame = -1 Query: 264 RTLDDL-KNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHK----GFLSKYVKKLKEMKFLREDL------------IFSTHSEEVY----------PRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 845 +TL+DL KNED L H QR+GLKYF D + RIPR E+ QM+ ++ ++V E I GS+RRG S GD+DV++ HP S L + V++L+++ F+ + L + S + E+ Y P+D Y G++ +TG+D+ N+ +R A KG+ +++ + P G GV A L D+EK++FD++ + + EP +R+ Sbjct: 120 KTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPL-----GVTGV-AGEPLPVDSEKDIFDYIQWKYREPKDRS 334
BLAST of CX046894 vs. ExPASy Swiss-Prot
Match: DPOLB_MOUSE (DNA polymerase beta OS=Mus musculus GN=Polb PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 4.796e-25 Identity = 73/221 (33.03%), Postives = 123/221 (55.66%), Query Frame = -1 Query: 264 RTLDDL-KNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKG----FLSKYVKKLKEMKFLREDL---------IFSTHSEE-------------VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 845 +TL+DL KNED L H QR+GLKYF+D + RIPR E+ QM+ ++ ++V E I GS+RRG S GD+DV++ HP+ S L + V++L+++ F+ + L + SE+ + P+D Y G++ +TG+D+ N+ +R A KG+ +++ + P G GV A L D+E+++FD++ + + EP +R+ Sbjct: 120 KTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEIKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQLPSEKDGKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPL-----GVTGV-AGEPLPVDSEQDIFDYIQWRYREPKDRS 334
BLAST of CX046894 vs. ExPASy Swiss-Prot
Match: DPOLB_DANRE (DNA polymerase beta OS=Danio rerio GN=polb PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.060e-24 Identity = 73/223 (32.74%), Postives = 117/223 (52.47%), Query Frame = -1 Query: 264 RTLDDLKN-EDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHK-----------------GFLSKYVKK-----------LKEMKFLREDLIFSTHSEEVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 845 R L+DLK E L H Q++GLKYF++ + RIPR E+++ME L+ K + V PE I GSYRRG S GD+D+++ HPD S GF++ + K KE + E+ + + P+D Y G++ +TG+D+ N+ +R A KG+ L++ + P G GV A L D+EK++F+++ + + EP +R+ Sbjct: 119 RNLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRSEMQKMEALILKELDIVDPEYIGTICGSYRRGAESSGDIDILLTHPDFTSQSEKQPKLLHAVVDHLESIGFITDTLSKGDTKFMGVCQLQKEKEEEEEESLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIRPL-----GVTGV-AGEPLLVDSEKDIFEYIQWKYREPKDRS 335 The following BLAST results are available for this feature:
BLAST of CX046894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046894 ID=CX046894; Name=CX046894; organism=Citrus sinensis; type=EST; length=845bpback to top |