DN618194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 3.523e-53 Identity = 104/113 (92.04%), Postives = 111/113 (98.23%), Query Frame = 3 Query: 3 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITI DGKTL+NELEVVEGMKLDRGYISPYFITNQKNQKCEL+DPLIL+HEKKIS++ +VV+VLELALKRQRPLLI Sbjct: 168 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTLFNELEVVEGMKLDRGYISPYFITNQKNQKCELDDPLILIHEKKISSINSVVKVLELALKRQRPLLI 280
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60A_ARATH (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60 PE=1 SV=2) HSP 1 Score: 202.216 bits (513), Expect = 6.644e-52 Identity = 101/113 (89.38%), Postives = 109/113 (96.46%), Query Frame = 3 Query: 3 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITI DGKTL+NELEVVEGMKLDRGY SPYFITNQK QKCEL+DPLIL+HEKKIS++ ++V+VLELALKRQRPLLI Sbjct: 167 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYTSPYFITNQKTQKCELDDPLILIHEKKISSINSIVKVLELALKRQRPLLI 279
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 2.525e-51 Identity = 101/113 (89.38%), Postives = 110/113 (97.35%), Query Frame = 3 Query: 3 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITI DGKT+ NELEVVEGMKLDRGYISPYFITNQKNQKCEL+DPLI+++EKKIS++ AVV+VLELALK+QRPLLI Sbjct: 168 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTMDNELEVVEGMKLDRGYISPYFITNQKNQKCELDDPLIIIYEKKISSINAVVKVLELALKKQRPLLI 280
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 3.297e-51 Identity = 100/113 (88.50%), Postives = 108/113 (95.58%), Query Frame = 3 Query: 3 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 MISTSEEIAQVGTISANG+REIGELIAKAME VGKEGVITI DGKTL+NELEVVEGMK+DRGYISPYFITN K QKCELEDPLIL+HEKKISN+ A+V+VLELALK+QRPLLI Sbjct: 168 MISTSEEIAQVGTISANGDREIGELIAKAMETVGKEGVITIQDGKTLFNELEVVEGMKIDRGYISPYFITNPKTQKCELEDPLILIHEKKISNINAMVKVLELALKKQRPLLI 280
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 4.306e-51 Identity = 100/113 (88.50%), Postives = 108/113 (95.58%), Query Frame = 3 Query: 3 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITI DG TLYNELEVVEGMKLDRGYISPYFITN K QKCELEDPLIL+H+KK++N+ AVV+VLE+ALK+QRPLLI Sbjct: 170 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFITNSKAQKCELEDPLILIHDKKVTNMHAVVKVLEMALKKQRPLLI 282
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 5.624e-51 Identity = 99/113 (87.61%), Postives = 108/113 (95.58%), Query Frame = 3 Query: 3 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITI DG TLYNELEVVEGMKLDRGYISPYFITN K QKCELEDPLIL+H+KK++N+ AVV+VLE+ALK+Q+PLLI Sbjct: 170 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFITNSKTQKCELEDPLILIHDKKVTNMHAVVKVLEMALKKQKPLLI 282
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60_BRANA (Chaperonin CPN60, mitochondrial OS=Brassica napus PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 2.445e-46 Identity = 95/113 (84.07%), Postives = 103/113 (91.15%), Query Frame = 3 Query: 3 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 MISTSEEIAQVGTISANG+RE+ KAME VGKEGVITI DGKTL+NELEVVEGMK+DRGYISPYFITNQKNQKCELEDPLIL+HEKKISNL ++V+VLELALK QR LLI Sbjct: 171 MISTSEEIAQVGTISANGDREL-VTDCKAMESVGKEGVITIQDGKTLFNELEVVEGMKIDRGYISPYFITNQKNQKCELEDPLILIHEKKISNLNSMVKVLELALKSQRSLLI 282
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH60C_ARATH (Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana GN=At3g13860 PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 1.136e-43 Identity = 87/113 (76.99%), Postives = 101/113 (89.38%), Query Frame = 3 Query: 3 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 MIST EEI QV TISANGEREIGELIA+AMEKVGKEGVIT+ DG TL NELEVVEGMKL RGYISPYFIT++K QKCELE+P+IL+HEKKIS++ ++++VLE A+K RPLLI Sbjct: 167 MISTPEEITQVATISANGEREIGELIARAMEKVGKEGVITVADGNTLDNELEVVEGMKLARGYISPYFITDEKTQKCELENPIILIHEKKISDINSLLKVLEAAVKSSRPLLI 279
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: CH601_MESSB (60 kDa chaperonin 1 OS=Mesorhizobium sp. (strain BNC1) GN=groL1 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.111e-36 Identity = 74/112 (66.07%), Postives = 91/112 (81.25%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I TSEE+AQVGTISANGE+EIG++IA+AM+KVG EGVIT+ + KT ELEVVEGM+ DRGY+SPYFITN + ELED IL+HEKK+SNL A++ VLE ++ RPLLI Sbjct: 138 IKTSEEVAQVGTISANGEKEIGQMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFITNPEKMVAELEDVYILLHEKKLSNLQAMLPVLEAVVQSGRPLLI 249
BLAST of DN618194 vs. ExPASy Swiss-Prot
Match: HSP60_CANAL (Heat shock protein 60, mitochondrial OS=Candida albicans GN=HSP60 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.717e-36 Identity = 75/112 (66.96%), Postives = 93/112 (83.04%), Query Frame = 3 Query: 6 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLI 341 I+TSEEIAQV TISANG++ IG+L+A AMEKVGKEGVIT+ +GKTL +ELEV EGMK DRG+ISPYFITN K K E E+PLIL+ EKKIS++ ++ LEL+ + +RPLLI Sbjct: 154 ITTSEEIAQVATISANGDKHIGDLLANAMEKVGKEGVITVKEGKTLEDELEVTEGMKFDRGFISPYFITNTKTGKVEFENPLILLSEKKISSIQDILPSLELSNQTRRPLLI 265 The following BLAST results are available for this feature:
BLAST of DN618194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN618194 ID=DN618194; Name=DN618194; organism=Citrus sinensis; type=EST; length=343bpback to top |