DN618136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618136 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.936e-42 Identity = 62/91 (68.13%), Postives = 70/91 (76.92%), Query Frame = -3 Query: 311 ALRARVYDDEVRNWXXXXXXXXXXXSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 583 ALRARVY DEVR W LVNSKE P+FEQP+MT++KLL YG M+VQEQENVKRVQLADKY+SEAALG+AN DAI+ G FYG Sbjct: 347 ALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437 HSP 2 Score: 67.781 bits (164), Expect = 2.936e-42 Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = -1 Query: 166 GGKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQY 276 GG+AAQQ+ NVPVPEGCTDP A N+DPTARSDDGSC Y Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474
BLAST of DN618136 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 2.936e-42 Identity = 61/91 (67.03%), Postives = 68/91 (74.73%), Query Frame = -3 Query: 311 ALRARVYDDEVRNWXXXXXXXXXXXSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 583 ALRARVYDDEVR + LVNS+E P FEQP MT EKL+EYGNM+V EQENVKRVQLA+ YLS+AALG+ANADAI G FYG Sbjct: 347 ALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437 HSP 2 Score: 71.633 bits (174), Expect = 2.936e-42 Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = -1 Query: 166 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQY 273 GK AQQ+N+PVPEGCTDP AENFDPTARSDDG+C Y Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVY 472
BLAST of DN618136 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 6.497e-42 Identity = 60/91 (65.93%), Postives = 74/91 (81.32%), Query Frame = -3 Query: 311 ALRARVYDDEVRNWXXXXXXXXXXXSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 583 ALRARVYDDEVR W LVNS+E P FEQP+MT+EKL+EYG M+V+EQENVKRVQLA++YLSEAALG+AN+DA+++G+FYG Sbjct: 338 ALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 428 HSP 2 Score: 66.2402 bits (160), Expect = 6.497e-42 Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = -1 Query: 163 GKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQYT 273 G+ AQQ N+PVPEGCTDP A+NFDPTARSDDGSC YT Sbjct: 428 GQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYT 465
BLAST of DN618136 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.179e-41 Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = -3 Query: 311 ALRARVYDDEVRNWXXXXXXXXXXXSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 583 ALRARVY DEVR W LVNSK+ P FEQP MT++KL+EYGNM+VQEQENVKRVQLAD+Y+S AALG+AN DAI G F+G Sbjct: 345 ALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435 HSP 2 Score: 67.0106 bits (162), Expect = 3.179e-41 Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = -1 Query: 160 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYTL 273 GKAAQQ+++PV +GCTDP A+N+DPTARSDDGSC Y L Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472
BLAST of DN618136 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 5.398e-41 Identity = 59/91 (64.84%), Postives = 73/91 (80.22%), Query Frame = -3 Query: 311 ALRARVYDDEVRNWXXXXXXXXXXXSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 583 ALRARVYDDEVR W LVNS++ TFEQP+MT+EKLLEYG+M+VQEQ+NVKRVQLAD Y+S+AALG+AN DA+++G+FYG Sbjct: 337 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427 HSP 2 Score: 65.0846 bits (157), Expect = 5.398e-41 Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = -1 Query: 163 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYT 273 GK AQQ +PVPEGCTD A+N+DPTARSDDGSC YT Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYT 463
BLAST of DN618136 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.033e-31 Identity = 67/91 (73.63%), Postives = 74/91 (81.32%), Query Frame = -3 Query: 311 ALRARVYDDEVRNWXXXXXXXXXXXSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 583 ALRARVYDDEVR W LVNSKE PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLADKYLSEAALG+AN+DA+ +G FYG Sbjct: 347 ALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
BLAST of DN618136 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 9.665e-30 Identity = 63/91 (69.23%), Postives = 74/91 (81.32%), Query Frame = -3 Query: 311 ALRARVYDDEVRNWXXXXXXXXXXXSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 583 ALRARVYDDEVR W LVNS+E PTF+QP+MT+EKL+EYG+M+VQEQENVKRVQLADKYLSEAALG+AN DA+++G FYG Sbjct: 334 ALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424
BLAST of DN618136 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 2.812e-29 Identity = 62/90 (68.89%), Postives = 73/90 (81.11%), Query Frame = -3 Query: 314 ALRARVYDDEVRNWXXXXXXXXXXXSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFY 583 ALRARVYDDEVR W LVNSKE PTF+QP+M+++KLL+YGNM+VQEQENVKRVQLADKYL+EAALG AN DAI+SG+F+ Sbjct: 349 ALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
BLAST of DN618136 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.812e-29 Identity = 63/90 (70.00%), Postives = 72/90 (80.00%), Query Frame = -3 Query: 314 ALRARVYDDEVRNWXXXXXXXXXXXSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFY 583 ALRARVYDDEVR W L+NS + PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLADKYL EAALG+ANADAI +G+F+ Sbjct: 351 ALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440
BLAST of DN618136 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29 Identity = 62/89 (69.66%), Postives = 71/89 (79.78%), Query Frame = -3 Query: 317 ALRARVYDDEVRNWXXXXXXXXXXXSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNF 583 ALRARVYDDEVR W LVNSKE PTFEQP+MT++KLL+YGNM+V+EQENVKRVQLADKY+SEAALG+AN DAI+ G F Sbjct: 347 ALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435 The following BLAST results are available for this feature:
BLAST of DN618136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618136 ID=DN618136; Name=DN618136; organism=Citrus sinensis; type=EST; length=585bpback to top |