DN617980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_STAPU (Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum punctulatum GN=pdhB PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 1.976e-62 Identity = 118/153 (77.12%), Postives = 132/153 (86.27%), Query Frame = -2 Query: 131 FEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 589 FEHVLLYNLKE IPD EY+ LE+AE+VRPG +TILTYSRMR+HV+QA K+LV KGYDPE+IDI SLKP DL TI SIKKTH+VLIVEECMRTGGIGASL A I E+ D+LDAPI+CLSSQDVPTPY+G LEE TV+QPAQIV AVEQLC Sbjct: 171 FEHVLLYNLKETIPDNEYLVCLEKAEIVRPGTDITILTYSRMRHHVLQATKSLVYKGYDPEIIDIVSLKPVDLGTISTSIKKTHKVLIVEECMRTGGIGASLRATIMEHLFDFLDAPIMCLSSQDVPTPYSGPLEELTVIQPAQIVQAVEQLC 323
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_ZYGCR (Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema circumcarinatum GN=pdhB PE=3 SV=2) HSP 1 Score: 231.491 bits (589), Expect = 2.416e-60 Identity = 113/154 (73.38%), Postives = 133/154 (86.36%), Query Frame = -2 Query: 128 FEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 589 FEHVLLYNLKE + +EEY+ LE+AE+VRPG +TILTYSRMR++V+QA K+LV KGYDPE+IDI SLKPFDL TIG S+ KTH+VLIVEECMRTGGIGA+L AAI E+F DYLDAPI+CLSSQDVPTPY+ LEE TV+QP QI+ VEQLC+ Sbjct: 171 FEHVLLYNLKEDLAEEEYLVCLEKAEVVRPGNDITILTYSRMRHNVLQATKSLVYKGYDPEIIDIVSLKPFDLGTIGASVCKTHKVLIVEECMRTGGIGATLRAAIMEHFFDYLDAPILCLSSQDVPTPYSSPLEELTVIQPNQIIQVVEQLCE 324
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_CHAGL (Pyruvate dehydrogenase E1 component subunit beta OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 3.155e-60 Identity = 111/154 (72.08%), Postives = 132/154 (85.71%), Query Frame = -2 Query: 128 FEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 589 FEHVLLYNL E + ++EY+ LE+AE+VRPG +TILTYSRMR+HV+QAAK LVNKGYDPE+IDI SLKP D+ TI S++KTH+VLIVEECMRTGGIGASL AAI E+ DYLDAPI CLSSQDVPTPY+G LEE TV+QP QI+ AVE++C+ Sbjct: 171 FEHVLLYNLNENLIEQEYLLCLEKAEVVRPGNDITILTYSRMRHHVLQAAKVLVNKGYDPEIIDILSLKPLDMGTISLSVRKTHKVLIVEECMRTGGIGASLRAAILEDLFDYLDAPIQCLSSQDVPTPYSGPLEELTVIQPNQIIQAVEEMCK 324
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_CHAVU (Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris GN=pdhB PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.609e-56 Identity = 103/152 (67.76%), Postives = 127/152 (83.55%), Query Frame = -2 Query: 134 FEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 589 FEHVLLYN+KE IP +EY+ LE+AE+VR G +TILTYSRMRYHV+QAAKTL+ KGYDPE+IDI SLKP D+ TI S++KTH+VLIVEECM+TGGIG +L +AI E+ D+LD PI+ LSSQDVPTPY G LE+ TV+QP+QIV A E++ Sbjct: 171 FEHVLLYNIKENIPQKEYLVPLEKAELVRSGNQITILTYSRMRYHVLQAAKTLIEKGYDPEIIDIISLKPLDMGTISTSLRKTHKVLIVEECMKTGGIGTTLKSAILESLFDFLDTPIMSLSSQDVPTPYNGFLEDLTVIQPSQIVEAAEKI 322
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_PORPU (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra purpurea GN=pdhB PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 5.963e-51 Identity = 96/152 (63.16%), Postives = 123/152 (80.92%), Query Frame = -2 Query: 134 FEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 589 FEHVLLYNL+E IP++EY+ L++AE+VR G+ +TILTYSRMR+HV +A L+N GYDPEV+D+ SLKP D+ +I S+KKTHRVLIVEECM+T GIGA L A I E+ D LDAP+V LSSQD+PTPY G+LE+ TV+QP QI+ AV+ + Sbjct: 171 FEHVLLYNLQEEIPEDEYLIPLDKAEVVRKGKDITILTYSRMRHHVTEALPLLLNDGYDPEVLDLISLKPLDIDSISVSVKKTHRVLIVEECMKTAGIGAELIAQINEHLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPHQIIDAVKNI 322
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_GRATL (Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria tenuistipitata var. liui GN=pdhB PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 7.788e-51 Identity = 95/152 (62.50%), Postives = 122/152 (80.26%), Query Frame = -2 Query: 134 FEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 589 FEHVLLYNLK+ +P++EY L++AE+VR G VTILTYSRMR+HVMQA LVN GY+PEVID+ SLKP D+ +I S+ KTH+++IVEECM+TGGIGA + A I +N+ D+LDAPIV LSSQD+PTPY G LE+ TV+ P QI+ AV+ + Sbjct: 171 FEHVLLYNLKDELPNDEYFLPLDKAELVRDGLDVTILTYSRMRHHVMQAVVDLVNDGYNPEVIDLISLKPLDITSIAQSLMKTHKLIIVEECMKTGGIGAEIIAQINDNYFDFLDAPIVRLSSQDIPTPYNGKLEKATVIYPQQIIEAVKSI 322
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_PORYE (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra yezoensis GN=pdhB PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 6.593e-50 Identity = 96/152 (63.16%), Postives = 119/152 (78.29%), Query Frame = -2 Query: 134 FEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 589 FEHVLLYNL+E IP EEY L + E VR G+ +TILTYSRMR+HV+QA L+ +GYDPEVID+ SLKP D+ +I S+KKTH+VLIVEECM+T GIGA L A I E D LDAP+V LSSQD+PTPY G+LE+ TV+QP+QIV +V+ + Sbjct: 171 FEHVLLYNLQEEIPQEEYFLPLNKVEFVRKGKDITILTYSRMRHHVIQALPALLKEGYDPEVIDLISLKPLDIDSISISVKKTHKVLIVEECMKTAGIGAELIAQINEYLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPSQIVDSVKSI 322
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_MESVI (Pyruvate dehydrogenase E1 component subunit beta OS=Mesostigma viride GN=pdhB PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.274e-49 Identity = 96/151 (63.58%), Postives = 118/151 (78.15%), Query Frame = -2 Query: 134 EHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 586 EHVLLYNLK +PD +Y+ LE+AE+VR G +TILTYSRMRY+V+QA K LV KGYDPE+ID+ SLKPFD+ TIG SI+KTH+VLIVEE M TGGI L + I ENF D LD +CLSS +VPTPY+G LEE ++VQ A I+ +VEQ+ Sbjct: 172 EHVLLYNLKAEVPDNDYVLPLEKAEIVRQGNDITILTYSRMRYNVIQAVKVLVEKGYDPEIIDLISLKPFDIETIGKSIQKTHKVLIVEESMMTGGISNVLQSLILENFFDDLDNRPMCLSSPNVPTPYSGPLEEVSIVQTADIIESVEQI 322
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_CHLAT (Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus atmophyticus GN=pdhB PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.796e-47 Identity = 93/149 (62.42%), Postives = 114/149 (76.51%), Query Frame = -2 Query: 140 EHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVE 586 EHVLLYNLK +PD +Y+ LE+AE+VR G +T+LTYSR RY+V+QA K LV +GYDPEVID+ SLKPFD+ TIG SI+KTH+VLIVEECM TGGI L + I +NF D LDA + LSS +VPTPY G LEE TVVQ I+ ++E Sbjct: 172 EHVLLYNLKGEVPDNDYLLPLEKAELVREGSDITVLTYSRQRYNVIQAVKVLVEEGYDPEVIDLISLKPFDMETIGKSIQKTHKVLIVEECMMTGGISNVLQSLIIDNFFDALDAAPLILSSPNVPTPYTGPLEEATVVQTIDIIESIE 320
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_CYACA (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidium caldarium GN=pdhB PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 7.544e-46 Identity = 92/153 (60.13%), Postives = 113/153 (73.86%), Query Frame = -2 Query: 128 EHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 586 EHVLLYNLK +PDEEY L++AE+VR G VTI+TYSRMRYHV+ A + LV G DPE+ID+ SLKP DL+TI SIKKTH+++IVEEC +TGGI A L + I +D LD+P V LSS+DVP PY G LE+ T++QP QIV V L Q Sbjct: 172 EHVLLYNLKGFVPDEEYYLPLDKAEVVRSGSDVTIVTYSRMRYHVLAAVEKLVLNGQDPEIIDLISLKPLDLHTISKSIKKTHKIVIVEECAQTGGIAAELISLINTYLYDELDSPAVRLSSKDVPIPYNGNLEKSTLIQPDQIVDVVTNLLQ 324 The following BLAST results are available for this feature:
BLAST of DN617980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617980 ID=DN617980; Name=DN617980; organism=Citrus sinensis; type=EST; length=590bpback to top |