DN617930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617930 vs. ExPASy Swiss-Prot
Match: PSMD6_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 6 OS=Arabidopsis thaliana GN=At4g24820 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 7.174e-71 Identity = 130/171 (76.02%), Postives = 152/171 (88.89%), Query Frame = 2 Query: 92 SEGTQQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERK 604 +EG+QQ HL+LA+K FLLTHPDV DIEKV LK EV +++H MA YETL+A SVL++DQS+L+SMR E+ELKKLD++IADAEENLGESEVREAHLAK+L++I+I DKEKALEQLK+TE KTVAVGQKMD+VFYTLQL FFYMDFDL+SKSIDKAK LFEEGGDWERK Sbjct: 5 AEGSQQPHLILANKLFLLTHPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDLDQSLLESMRAANEEELKKLDEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLKLTEGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERK 175
BLAST of DN617930 vs. ExPASy Swiss-Prot
Match: PSMD6_ORYSJ (26S proteasome non-ATPase regulatory subunit 6 OS=Oryza sativa subsp. japonica GN=RPN7 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 4.352e-68 Identity = 127/170 (74.71%), Postives = 149/170 (87.65%), Query Frame = 2 Query: 95 EGTQQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERK 604 EG QQ HLVLAHK FLL+HPDV D+ KV L+ +V + VK+ DMAS YE+L A VLE D ++L MR +IE+E++KLD++IADAEENLGESEVREAHLAKSL++I++G+KEKALEQLKVTE KTVAVGQKMDLVF+TLQ+GFFYMDFDLISKSIDKAK LFEEGGDWERK Sbjct: 8 EGKQQPHLVLAHKLFLLSHPDVDDLAKVDLRADVLAAVKSDDMASLYESLGAGGVLETDAALLAEMRGRIEEEIRKLDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGKTVAVGQKMDLVFHTLQIGFFYMDFDLISKSIDKAKKLFEEGGDWERK 177
BLAST of DN617930 vs. ExPASy Swiss-Prot
Match: PSMD6_BOVIN (26S proteasome non-ATPase regulatory subunit 6 OS=Bos taurus GN=PSMD6 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.510e-36 Identity = 78/174 (44.83%), Postives = 120/174 (68.97%), Query Frame = 2 Query: 86 MDSEGT-QQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERK 604 ++ EG + L +A RFLL+ P+ + ++ E+ + V+ ++MA +YE L +MD +L+ M+ EDELK+LD+ + DAE+NLGESE+R+A +AK+ + +IGDKE AL + T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL EEGGDW+R+ Sbjct: 6 LEEEGLPKNPDLRIAQLRFLLSLPEHRG--DAAVRDELMAAVRDNNMAPYYEALCKSLEWQMDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRRTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRR 177
BLAST of DN617930 vs. ExPASy Swiss-Prot
Match: PSMD6_MOUSE (26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus GN=Psmd6 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.972e-36 Identity = 78/174 (44.83%), Postives = 119/174 (68.39%), Query Frame = 2 Query: 86 MDSEGT-QQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERK 604 ++ EG + L +A RFLL+ P+ + ++ E+ + V+ ++MA +YE L +MD +L M+ E+ELK+LD+ + DAE+NLGESE+R+A +AK+ + QIGDKE AL + T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL EEGGDW+R+ Sbjct: 6 LEEEGLPKNPDLRIAQLRFLLSLPEHRG--DAAVREELMAAVRENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRR 177
BLAST of DN617930 vs. ExPASy Swiss-Prot
Match: PSMD6_HUMAN (26S proteasome non-ATPase regulatory subunit 6 OS=Homo sapiens GN=PSMD6 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.393e-36 Identity = 77/174 (44.25%), Postives = 120/174 (68.97%), Query Frame = 2 Query: 86 MDSEGT-QQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERK 604 ++ EG + L +A RFLL+ P+ + ++ E+ + V+ ++MA +YE L ++D +L+ M+ EDELK+LD+ + DAE+NLGESE+R+A +AK+ + +IGDKE AL + T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL EEGGDW+R+ Sbjct: 6 LEEEGLPKNPDLRIAQLRFLLSLPEHRG--DAAVRDELMAAVRDNNMAPYYEALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRR 177
BLAST of DN617930 vs. ExPASy Swiss-Prot
Match: PSMD6_DICDI (26S proteasome non-ATPase regulatory subunit 6 OS=Dictyostelium discoideum GN=psmD6 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.256e-32 Identity = 63/133 (47.37%), Postives = 97/133 (72.93%), Query Frame = 2 Query: 206 VKAHDMASFYETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERK 604 ++ H M Y+ LV + DQ ++ ++ + E ELK LD++I D+ EN GESE+REA+LAKS FY +IGDK+ A+E + T KTV +GQK+D+VF +++G F+MD D+++++++KA+SL EEGGDW+RK Sbjct: 38 IETHKMLPLYKILVEQLKWTEDQGLVSKLKAENESELKALDNKITDSVENFGESEIREAYLAKSDFYCRIGDKDTAVEMYRQTFEKTVPLGQKLDIVFTLIRMGIFWMDHDIVTRNLEKAQSLVEEGGDWDRK 170
BLAST of DN617930 vs. ExPASy Swiss-Prot
Match: PSMD6_DROME (26S proteasome non-ATPase regulatory subunit 6 OS=Drosophila melanogaster GN=Rpn7 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.120e-31 Identity = 71/174 (40.80%), Postives = 115/174 (66.09%), Query Frame = 2 Query: 86 MDSEGTQQ-AHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERK 604 ++ +G ++ +L LA +FLLT + + + LK ++ ++ +MA +YE + +E +D+ +L M+ E+++LD I DAE+NLGE EVREA+L KS + +IGDK A + T KTV++G ++D+VF+ ++LG FY+D DLI+++IDKAK L EEGGDW+R+ Sbjct: 6 LEEQGLEKNPNLELAQTKFLLTLAEYK--QDAALKAKLLEAIRTENMAPWYEHICSELGWTVDKDLLARMKENNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYLCRIGDKAAAETAFRKTYEKTVSLGHRLDIVFHLIRLGLFYLDHDLITRNIDKAKYLIEEGGDWDRR 177
BLAST of DN617930 vs. ExPASy Swiss-Prot
Match: PSMD6_CAEEL (26S proteasome non-ATPase regulatory subunit 6 OS=Caenorhabditis elegans GN=rpn-7 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.495e-31 Identity = 68/163 (41.72%), Postives = 103/163 (63.19%), Query Frame = 2 Query: 116 LVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERK 604 L L+ RF+L HP+V K ++ +K DMA FYE + A+ + +D + L +M+ + ++ ++ + DAE+NLGESEVR+ L K +Y QIGDK+ AL+ T KTV +G ++D+VF +++G F++D LI+K I KAK L E+GGDWERK Sbjct: 29 LELSQTRFMLNHPEVDSSVKEAKLEKLQETIKEFDMAPFYELVCADFKIVVDATQLAAMKAANQKKIDEITAEVEDAEKNLGESEVRQGLLRKFEYYCQIGDKDNALKAYTATYEKTVGMGYRIDVVFAMIRVGLFFLDHHLINKFITKAKELMEQGGDWERK 191
BLAST of DN617930 vs. ExPASy Swiss-Prot
Match: RPN7_SCHPO (Probable 26S proteasome regulatory subunit rpn7 OS=Schizosaccharomyces pombe GN=rpn7 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.284e-19 Identity = 54/177 (30.51%), Postives = 97/177 (54.80%), Query Frame = 2 Query: 86 MDSEGTQQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLV----AESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERK 604 M + + L ++ F L+ P +++ + L +FS ++ HD+A Y+ L + ++ D + L+SM K E++L + D I DA+E GE E+ EA K+ +Y I D+E+ ++ T + G K+D++F ++L + Y D ++ + ++K K L E+GGDWERK Sbjct: 13 MTEKARTVSDLTISQAIFELSSPFLENKSQKALD-TLFSAIRDHDLAPLYKYLSENPKTSASIDFDSNFLNSMIKKNEEKLAEFDKAIEDAQELNGEHEILEAMKNKADYYTNICDRERGVQLCDETFERATLTGMKIDVLFSKIRLAYVYADMRVVGQLLEKLKPLIEKGGDWERK 188
BLAST of DN617930 vs. ExPASy Swiss-Prot
Match: RPN7_YEAST (26S proteasome regulatory subunit RPN7 OS=Saccharomyces cerevisiae GN=RPN7 PE=1 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 7.791e-17 Identity = 53/182 (29.12%), Postives = 94/182 (51.65%), Query Frame = 2 Query: 122 LAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESV--------------------LEMDQSVLDSMRTKIEDELKKLDDRIADAEEN-LGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERK 604 ++ K FLLT V ++ V + +K +MA +Y+ L E + ++ DQ + + + K E ++K+L+++I EE+ GE E +A + +Y QIGDK+ A + L + SK ++ G K+D++ +LGFFY D + + ++ S+ E+GGDWER+ Sbjct: 26 VSEKAFLLTQSKVSIEQRKEAAEFVLAKIKEEEMAPYYKYLCEEYLVNNGQSDLEHDEKSDSLNEWIKFDQELYNELCKKNESKIKELNEKIQKLEEDDEGELEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERR 207 The following BLAST results are available for this feature:
BLAST of DN617930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617930 ID=DN617930; Name=DN617930; organism=Citrus sinensis; type=EST; length=605bpback to top |