DN617883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617883 vs. ExPASy Swiss-Prot
Match: TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.517e-29 Identity = 77/194 (39.69%), Postives = 115/194 (59.28%), Query Frame = 1 Query: 73 VQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWAAPNLISRKLTHHITTVLFFGFGLWSLWDAFS---DGGXXXXXXXXX--KKLDADFKANAGATKEGS-KADDELKKQRRPFLSQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAV 636 + F ++++ ++SE+GDKTFF AAI+AMR+ R VL+G + AL +MT LS + G+A +I R T++++TVLF FG+ L + D G KK D +F+ G + + ++ +L F SPIF++A ++TF EWGD+SQL TI LAA E+P+GV +GG +G LCT AV Sbjct: 94 IHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFGYAT-TVIPRVYTYYVSTVLFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPGDVETGTSITVPQKKWL-HFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAV 285
BLAST of DN617883 vs. ExPASy Swiss-Prot
Match: TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.282e-28 Identity = 75/193 (38.86%), Postives = 112/193 (58.03%), Query Frame = 1 Query: 73 VQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWAAPNLISRKLTHHITTVLFFGFGLWSLWDAFS---DGGXXXXXXXXX--KKLDADFKANAGATKEGSKADDELKKQRRPFLSQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAV 636 + F ++++ ++SE+GDKTFF AAI+AMR+ R VL+G + AL +MT LS + G+A +I R T++++T LF FG+ L + D G KK D +F+ + ++ +L F SPIF++A ++TF EWGD+SQL TI LAA E+P+GV +GG +G LCT AV Sbjct: 94 IHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFGYAT-TVIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPDVETGTSTAIPQKKWL-HFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAV 284
BLAST of DN617883 vs. ExPASy Swiss-Prot
Match: TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.282e-28 Identity = 75/193 (38.86%), Postives = 112/193 (58.03%), Query Frame = 1 Query: 73 VQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWAAPNLISRKLTHHITTVLFFGFGLWSLWDAFS---DGGXXXXXXXXX--KKLDADFKANAGATKEGSKADDELKKQRRPFLSQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAV 636 + F ++++ ++SE+GDKTFF AAI+AMR+ R VL+G + AL +MT LS + G+A +I R T++++T LF FG+ L + D G KK D +F+ + ++ +L F SPIF++A ++TF EWGD+SQL TI LAA E+P+GV +GG +G LCT AV Sbjct: 94 IHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFGYAT-TVIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPDVETGTSTAIPQKKWL-HFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAV 284
BLAST of DN617883 vs. ExPASy Swiss-Prot
Match: YD68_SCHPO (UPF0016 membrane protein C17G8.08c OS=Schizosaccharomyces pombe GN=SPAC17G8.08c PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.856e-28 Identity = 75/199 (37.69%), Postives = 107/199 (53.77%), Query Frame = 1 Query: 91 SLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWAAPNLISRKLTHHITTVLFFGFGLWSLWDAFSDGGXXXXXXXXXKKLDADFKANA--------GA---------TKEGSKADDELKKQRRPFLSQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAV 636 S++M EIGDKTF AA+LA + R V +G AL +MT+L ++G AAP L RKLT + VLF FG+ L +A + + + AN GA ++ G +LK + R ++ FSP+F+KAF++TF EWGD+SQ+ATI +AA +N +GV +G +G A CT AV Sbjct: 53 SISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLGHAAPLLFPRKLTDILGGVLFVIFGIKMLMEAKEVMDSKESMSDEFQNVRNEIAANGPIDQLLEEGAAPSHYTGHRSRSGHTLMSQLKSKGRNVMATLFSPLFIKAFALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAV 251
BLAST of DN617883 vs. ExPASy Swiss-Prot
Match: Y615_SYNY3 (UPF0016 membrane protein sll0615 OS=Synechocystis sp. (strain PCC 6803) GN=sll0615 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.600e-25 Identity = 72/189 (38.10%), Postives = 102/189 (53.97%), Query Frame = 1 Query: 70 VVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWAAPNLISRKLTHHITTVLFFGFGLWSLWDAFSDGGXXXXXXXXXKKLDADFKANAGATKEGSKADDELKKQRRPFLSQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAV 636 ++ FT L + +SE+GDKTFF A ILAMR+PRR VL G +G L MTILS ++G L +R + ++ LF FG LWDA K A+ + A K + + +LK R + I +++F++TF EWGD++Q+ATI LAA N +GV G I+G +C AV Sbjct: 1 MLTAFTAGLLLITVSELGDKTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFTFLPTRYI-NYAEVALFLIFGTKLLWDA------------RRIKATANLEEMEDAEKAIASGEKKLKIVPRGW------GIVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAV 170
BLAST of DN617883 vs. ExPASy Swiss-Prot
Match: YB37_YEAST (UPF0016 membrane protein YBR187W OS=Saccharomyces cerevisiae GN=YBR187W PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.767e-23 Identity = 71/209 (33.97%), Postives = 107/209 (51.20%), Query Frame = 1 Query: 55 SKMSSVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWAAPNLISRKLTHHITTVLFFGFGLWSLWDAF---SDGGXXXXXXXXXKKL-------DADFKANAGATK-----EGSKADDELKKQRRPFLSQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAV 636 S SS ++ F S++M LSEIGDKTF AA++AMRH R LV S +L +MTILS VVG +A +S + T +LF FG + D G +++ D D G T + + ++ + R S FSP++++ F + F GE GD+SQ++ I +A D + + V+ G +IG A+C+ AV Sbjct: 33 SGSSSHLKSFLMSVSMIGLSEIGDKTFLIAALMAMRHKRVLVFSAAATSLAIMTILSGVVGHSAVAFLSERYTAFFAGILFLVFGYKLTMEGLEMSKDAGVEEEMAEVEEEIAIKDMNQDMDDVEKGGDTAYDKQLKNASIGKKIVHRIRELASFMFSPVWVQIFLMVFLGELGDRSQISIIAMATDSDYWYVIAGAVIGHAICSGLAV 241
BLAST of DN617883 vs. ExPASy Swiss-Prot
Match: YLY5_SCHPO (UPF0016 membrane protein C186.05c OS=Schizosaccharomyces pombe GN=SPAC186.05c PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.600e-17 Identity = 64/204 (31.37%), Postives = 93/204 (45.59%), Query Frame = 1 Query: 73 VQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWAAPNLISRKLTHHITTVLFFGFGLWSLWDAFSDGGXXXXXXXXXKKL------DADFKANAGATKEGSKADDELKKQR----------RPFLSQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAV 636 VQ S++M + E+GDK+F A+LA ++ R V G AL MT + +VG AAP L + +TH + LF FG+ L ++ K+ + D K S K + + S+ FS F+KAF++ F E GD+SQ+ATI ++A E V +G IG LCT AV Sbjct: 24 VQNIGMSISMIIGCELGDKSFIVTALLAYQYGRASVFFGSYLALFFMTSFAVLVGRAAPFLFPKSITHILGGTLFLIFGVKMLKESKEVRESQQSLENEFDKVEKIIVNEEDMKKTLELGLPASNRSSSTLKDKFFKVFSMSCFKNLFSKKFSRAFIKAFALIFVSELGDRSQIATIVMSAKEKVLDVFIGVNIGHMLCTMVAV 227 The following BLAST results are available for this feature:
BLAST of DN617883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617883 ID=DN617883; Name=DN617883; organism=Citrus sinensis; type=EST; length=638bpback to top |