DN617641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL1O_ARATH (RING-H2 finger protein ATL1O OS=Arabidopsis thaliana GN=ATL1O PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 1.885e-27 Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 410 QEDFFDEDHGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWL 655 +E+F D + +DHPIW I T GL QS+I+SI + YK+ GLIE TDC VCL+EF+EDESLRLLPKC+HAFHISCIDTWL Sbjct: 131 EEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWL 209 HSP 2 Score: 24.6386 bits (52), Expect = 1.885e-27 Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 3 Query: 660 SHTNCPLC 683 SHTNCPLC Sbjct: 211 SHTNCPLC 218
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL5F_ARATH (RING-H2 finger protein ATL5F OS=Arabidopsis thaliana GN=ATL5F PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.357e-23 Identity = 50/81 (61.73%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 425 DEDHGPVLD----HPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWL 655 DED D H +W I T+GL +S I+SI V +KK G+I+GT+CSVCL+EF+EDESLRLLPKCSHAFH++CIDTWL Sbjct: 87 DEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWL 167
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL3A_ARATH (RING-H2 finger protein ATL3A OS=Arabidopsis thaliana GN=ATL3A PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.250e-20 Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 2 Query: 479 GLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLK 658 GL +S+I SI V+KY+K G +E +DCSVCLSEFQE+ESLRLLPKC+HAFH+ CIDTWLK Sbjct: 133 GLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLK 192
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL5G_ARATH (Probable RING-H2 finger protein ATL5G OS=Arabidopsis thaliana GN=ATL5G PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.245e-20 Identity = 43/63 (68.25%), Postives = 53/63 (84.13%), Query Frame = 2 Query: 470 NTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLK 658 N GL +S+I SI V+KYK G ++G+DCSVCLSEF+E+ESLRLLPKC+HAFH+ CIDTWLK Sbjct: 113 NGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK 175
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL1D_ARATH (RING-H2 finger protein ATL1D OS=Arabidopsis thaliana GN=ATL1D PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17 Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 416 DFFDEDHGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWL 655 +F D D +++++ GL Q++ID++ VF YK+ G E DC+VCL EF ED+ LRLLP CSHAFHI CIDTWL Sbjct: 97 EFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWL 176
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL2C_ARATH (Putative RING-H2 finger protein ATL2C OS=Arabidopsis thaliana GN=ATL2C PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.751e-16 Identity = 43/87 (49.43%), Postives = 59/87 (67.82%), Query Frame = 2 Query: 407 TQEDFFDED---HGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGL-IEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWL 655 ++ED+FD G + ++ ++ G+ QS+ID++ VF YK VGL I DC VCL EF+ ++ LRLLPKCSHAFH+ CIDTWL Sbjct: 74 SREDYFDNVTALQGQL--QQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWL 158 HSP 2 Score: 20.7866 bits (42), Expect = 1.751e-16 Identity = 6/8 (75.00%), Postives = 7/8 (87.50%), Query Frame = 3 Query: 660 SHTNCPLC 683 SH+ CPLC Sbjct: 160 SHSTCPLC 167
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL4H_ARATH (Putative RING-H2 finger protein ATL4H OS=Arabidopsis thaliana GN=ATL4H PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.082e-15 Identity = 39/65 (60.00%), Postives = 45/65 (69.23%), Query Frame = 2 Query: 470 NTIGLPQSVIDSIAVFKYKKDVG--LIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLK 658 +T GL ++I I FK KK I GTDCS+CL EF EDESLRLLPKC+H FH+ CID WLK Sbjct: 150 STAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLK 214
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL4K_ARATH (RING-H2 finger protein ATL4K OS=Arabidopsis thaliana GN=ATL4K PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.094e-15 Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 410 QEDFFDED---HGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEGT-DCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWL 655 +ED+FD G + +++++ G+ QS ID++ VF YK +GL DC+VCL EF+ ++ LRLLPKCSHAFH+ CIDTWL Sbjct: 83 REDYFDNVTALQGQL--QQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWL 166 HSP 2 Score: 20.7866 bits (42), Expect = 1.094e-15 Identity = 6/8 (75.00%), Postives = 7/8 (87.50%), Query Frame = 3 Query: 660 SHTNCPLC 683 SH+ CPLC Sbjct: 168 SHSTCPLC 175
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL5I_ARATH (RING-H2 finger protein ATL5I OS=Arabidopsis thaliana GN=ATL5I PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 2 Query: 458 IWYINTIGLPQSVIDSIAVFKYKKDVGLIEGT----------DCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLK 658 ++++N GL Q+ ID++ VF YK+ VG G DC+VCL EF E + LRLLP CSHAFH++CIDTWL+ Sbjct: 100 LFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQ 176
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL3I_ARATH (RING-H2 finger protein ATL3I OS=Arabidopsis thaliana GN=ATL3I PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.754e-14 Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 2 Query: 440 PVLDHPIWYINTIGLPQSVIDSIAVFKYKK-DVGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWL 655 P L H +++++ GL Q+ ID++ VF Y + L + DC+VCL+EF + + LRLLP CSHAFH+ CIDTWL Sbjct: 168 PQLQH-LFFLHDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWL 239 The following BLAST results are available for this feature:
BLAST of DN617641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617641 ID=DN617641; Name=DN617641; organism=Citrus sinensis; type=EST; length=684bpback to top |