DN617614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617614 vs. ExPASy Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2) HSP 1 Score: 308.916 bits (790), Expect = 9.176e-85 Identity = 141/159 (88.68%), Postives = 152/159 (95.60%), Query Frame = -2 Query: 141 LGAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAYQLGTAPVYMAFLRFMGDETEARSYSYSLEVGGNGRKLSWEGTPRSIRDCHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPDAGVCIPNLCS 617 L AHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVF CFGQYFCLHFEA+QLG APVYMAFLRFMGDE +AR+Y+YSLEVGG+GRK +WEGTPRS+RD HRKVRDSHDGLIIQRNMALFFSGGD+KELKLRVTGRIWKEQQNPD+GVCI ++CS Sbjct: 150 LVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQQNPDSGVCITSMCS 308 HSP 2 Score: 26.1794 bits (56), Expect = 9.176e-85 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = -3 Query: 611 AGSDCSVVGDIPYLV 655 AGS+C+ VGDI +LV Sbjct: 137 AGSECAAVGDITFLV 151
BLAST of DN617614 vs. ExPASy Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 2.036e-84 Identity = 143/161 (88.82%), Postives = 148/161 (91.93%), Query Frame = -2 Query: 147 PILGAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAYQLGTAPVYMAFLRFMGDETEARSYSYSLEVGGNGRKLSWEGTPRSIRDCHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQ--NPDAGVCIPNL 623 P L AHLRDDHKVDMH+GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEA+QLG APVYMAFLRFMGDETEAR+Y+YSLEVGG GRKL WEGTPRS+RD HRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQ G CIPNL Sbjct: 165 PFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQQSGEGGGACIPNL 325 HSP 2 Score: 30.4166 bits (67), Expect = 2.036e-84 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = -3 Query: 611 AGSDCSVVGDIPYLV 655 AGS+CSV GDIP+LV Sbjct: 154 AGSECSVTGDIPFLV 168
BLAST of DN617614 vs. ExPASy Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 4.518e-84 Identity = 141/161 (87.58%), Postives = 150/161 (93.17%), Query Frame = -2 Query: 141 PILGAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAYQLGTAPVYMAFLRFMGDETEARSYSYSLEVGGNGRKLSWEGTPRSIRDCHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPDAGVCIPNLCS 623 P L AHLRDDHKVDMH G TFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEA+QLG PVYMAFLRFMGDE +ARSYSYSLEVGG+GRKL+WEGTPRSIRD HRKVRDS+DGLIIQRNMALFFSGGDRKELKLRVTG+IWKEQ +PD+G+ IPNL S Sbjct: 166 PFLVAHLRDDHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKELKLRVTGKIWKEQHSPDSGLSIPNLSS 326 HSP 2 Score: 30.0314 bits (66), Expect = 4.518e-84 Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = -3 Query: 611 AGSDCSVVGDIPYLV 655 AGS+C +VGDIP+LV Sbjct: 155 AGSECGIVGDIPFLV 169
BLAST of DN617614 vs. ExPASy Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.000e-71 Identity = 120/147 (81.63%), Postives = 133/147 (90.48%), Query Frame = -2 Query: 183 PILGAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAYQLGTAPVYMAFLRFMGDETEARSYSYSLEVGGNGRKLSWEGTPRSIRDCHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 623 P L HL+DDHKVDMH GCTFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEA+QLG APVYMAFLRFMGDE EA+ +SYSLEVG +GRKL+W+G PRSIRD HRKVRDS DGLII RN+AL+FSGGDR+ELKLRVTGRIWKE+ Sbjct: 162 PTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308 HSP 2 Score: 28.4906 bits (62), Expect = 1.000e-71 Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = -3 Query: 611 AGSDCSVVGDIPYLV 655 AGS+CSV GDIP LV Sbjct: 151 AGSECSVTGDIPTLV 165
BLAST of DN617614 vs. ExPASy Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 9.133e-70 Identity = 117/147 (79.59%), Postives = 131/147 (89.12%), Query Frame = -2 Query: 183 PILGAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAYQLGTAPVYMAFLRFMGDETEARSYSYSLEVGGNGRKLSWEGTPRSIRDCHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 623 P L HL+DDHKVDMH GCTFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEA+QLG APVYMAFLRFMGDE EA+ +SYSLEVG + RKL+W+G PRSIRD HRKVRDS DGLII RN+AL+FSG D++ELKLRVTGRIWKE+ Sbjct: 159 PTLVDHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVTGRIWKEE 305 HSP 2 Score: 28.4906 bits (62), Expect = 9.133e-70 Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = -3 Query: 611 AGSDCSVVGDIPYLV 655 AGS+CSV GDIP LV Sbjct: 148 AGSECSVTGDIPTLV 162 The following BLAST results are available for this feature:
BLAST of DN617614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617614 ID=DN617614; Name=DN617614; organism=Citrus sinensis; type=EST; length=657bpback to top |