DN617477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCL11_ARATH (Cyclin-L1-1 OS=Arabidopsis thaliana GN=CYCL1-1 PE=2 SV=2) HSP 1 Score: 336.65 bits (862), Expect = 5.582e-92 Identity = 163/184 (88.59%), Postives = 175/184 (95.11%), Query Frame = 3 Query: 51 MIYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWNLANDSLR 602 MIYTAIDNFYL+DEQLK SPSRKDGIDE TE +LRIYGCDLIQE GILLKLPQAVMATGQVLF RFYCK+S A+FDVKIVAAS VWLASKLEE+P+KARQVIIVFHRMECRRE LP+EHLD+++KKFSELK+E+SRTERHILKEMGFVCHVEHPHKFISNYLATLETP ELRQEAWNLANDSLR Sbjct: 1 MIYTAIDNFYLSDEQLKASPSRKDGIDETTEISLRIYGCDLIQEGGILLKLPQAVMATGQVLFQRFYCKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRMECRRENLPLEHLDMYAKKFSELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATLETPPELRQEAWNLANDSLR 184
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCL11_ORYSJ (Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYCL1-1 PE=2 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 3.170e-87 Identity = 154/184 (83.70%), Postives = 169/184 (91.85%), Query Frame = 3 Query: 51 MIYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEAWNLANDSLR 602 MIYTAID FYLTDEQL+DSPSRKDGIDEATET LR+YGCDLIQESGILLKLPQAVMAT QVLFHRFYCK+SF RF VK VAAS VWLA KLEESPR+++ +IIVFHRMECRRE +PIEHLD+FSKK+S+LK ++ RTERH+LKEMGF+CHVEHPHKFISNYLATLE P EL QEAWNLANDSLR Sbjct: 1 MIYTAIDTFYLTDEQLRDSPSRKDGIDEATETALRVYGCDLIQESGILLKLPQAVMATAQVLFHRFYCKKSFVRFSVKRVAASCVWLAGKLEESPRRSKHIIIVFHRMECRRENVPIEHLDVFSKKYSDLKHDLVRTERHLLKEMGFICHVEHPHKFISNYLATLEAP-ELTQEAWNLANDSLR 183
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNL1_DANRE (Cyclin-L1 OS=Danio rerio GN=ccnl1 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.959e-40 Identity = 87/187 (46.52%), Postives = 121/187 (64.71%), Query Frame = 3 Query: 54 IYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRME--CRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE--LRQEAWNLANDSLR 602 ++ AIDN + +++L +PS DG+D TET LRI GC+ IQ +GILL+LPQ MATGQV+F RF+ +SF + + +IVA + V LASK+EESPR+ R VI VFH ++ ++ P+ + + + K ++ + ER ILKE+GF HV+HPHK I YL LE L Q AWN ND+LR Sbjct: 30 VFLAIDNSIIPEDRLSTTPSMLDGLDHETETDLRILGCERIQSAGILLRLPQVAMATGQVIFQRFFFSKSFVKHNFEIVAMACVNLASKIEESPRRVRDVINVFHHLKQGKGKKSTPL----ILDQNYINTKNQVIKAERRILKELGFCVHVKHPHKIIVMYLQVLECEKNQMLVQTAWNYMNDALR 212
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNL1_RAT (Cyclin-L1 OS=Rattus norvegicus GN=Ccnl1 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.105e-39 Identity = 87/181 (48.07%), Postives = 117/181 (64.64%), Query Frame = 3 Query: 66 IDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE--LRQEAWNLANDSLR 602 ID+ + +E+L +PS +DG+D +ET LRI GC+LIQ +GILL+LPQ MATGQVLFHRF+ +SF + +IVA + + LASK+EE+PR+ R VI VFH + R G + + + K ++ + ER +LKE+GF HV+HPHK I YL LE L Q AWN NDSLR Sbjct: 55 IDHSVIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLR-GKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLR 234
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNL1_MOUSE (Cyclin-L1 OS=Mus musculus GN=Ccnl1 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.105e-39 Identity = 87/181 (48.07%), Postives = 117/181 (64.64%), Query Frame = 3 Query: 66 IDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE--LRQEAWNLANDSLR 602 ID+ + +E+L +PS +DG+D +ET LRI GC+LIQ +GILL+LPQ MATGQVLFHRF+ +SF + +IVA + + LASK+EE+PR+ R VI VFH + R G + + + K ++ + ER +LKE+GF HV+HPHK I YL LE L Q AWN NDSLR Sbjct: 60 IDHSLIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLR-GKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLR 239
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNL1_HUMAN (Cyclin-L1 OS=Homo sapiens GN=CCNL1 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.105e-39 Identity = 87/181 (48.07%), Postives = 117/181 (64.64%), Query Frame = 3 Query: 66 IDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE--LRQEAWNLANDSLR 602 ID+ + +E+L +PS +DG+D +ET LRI GC+LIQ +GILL+LPQ MATGQVLFHRF+ +SF + +IVA + + LASK+EE+PR+ R VI VFH + R G + + + K ++ + ER +LKE+GF HV+HPHK I YL LE L Q AWN NDSLR Sbjct: 54 IDHSLIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLR-GKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLR 233
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNL2_MOUSE (Cyclin-L2 OS=Mus musculus GN=Ccnl2 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.443e-39 Identity = 87/185 (47.03%), Postives = 120/185 (64.86%), Query Frame = 3 Query: 54 IYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP--LELRQEAWNLANDSLR 602 + ++N L D++L+ +PS G+D TET LR+ GC+LIQ +GILL+LPQ MATGQVLF RF+ +SF + ++ V+ + V LASK+EE+PR+ R VI VFHR+ RE L + +++ LK ++ + ER +LKE+GF HV+HPHK I YL LE L Q AWN NDSLR Sbjct: 43 VLITLENCLLPDDKLRFTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPL-VLDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWNYMNDSLR 226
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNL2_RAT (Cyclin-L2 OS=Rattus norvegicus GN=Ccnl2 PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 1.884e-39 Identity = 87/185 (47.03%), Postives = 120/185 (64.86%), Query Frame = 3 Query: 54 IYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP--LELRQEAWNLANDSLR 602 + ++N L D++L+ +PS G+D TET LR+ GC+LIQ +GILL+LPQ MATGQVLF RF+ +SF + ++ V+ + V LASK+EE+PR+ R VI VFHR+ RE L + +++ LK ++ + ER +LKE+GF HV+HPHK I YL LE L Q AWN NDSLR Sbjct: 43 VLITLENCLLPDDKLRFTPSMSSGLDIDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPL-VLDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWNYMNDSLR 226
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNL2_HUMAN (Cyclin-L2 OS=Homo sapiens GN=CCNL2 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.214e-39 Identity = 86/186 (46.24%), Postives = 121/186 (65.05%), Query Frame = 3 Query: 54 IYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRM-ECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP--LELRQEAWNLANDSLR 602 + ++N L D++L+ +PS G+D TET LR+ GC+LIQ +GILL+LPQ MATGQVLF RF+ +SF + ++ V+ + V LASK+EE+PR+ R VI VFHR+ + R + P+ L + + LK ++ + ER +LKE+GF HV+HPHK I YL LE L Q +WN NDSLR Sbjct: 45 VLITLENCLLPDDKLRFTPSMSSGLDTDTETDLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRQLRDKKKPVPL--LLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTSWNYMNDSLR 228
BLAST of DN617477 vs. ExPASy Swiss-Prot
Match: CCNL1_XENLA (Cyclin-L1 OS=Xenopus laevis GN=ccnl1 PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 3.214e-39 Identity = 87/188 (46.28%), Postives = 117/188 (62.23%), Query Frame = 3 Query: 54 IYTAIDNFYLTDEQLKDSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFH---RMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE--LRQEAWNLANDSLR 602 +Y ID + +E+L +PS DG+D TET LRI GC+LIQ +GILL+LPQ MATGQVLFHRF+ +SF + +I+A + + LASK+EE+PR+ R VI V H ++ +R P+ + + + K + + ER ILKE+GF HV+HPHK I YL LE L Q AWN ND LR Sbjct: 30 VYLTIDYSLIPEERLSPTPSMSDGLDLNTETDLRILGCELIQSAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIIAMACINLASKIEEAPRRIRDVINVCHHLRQIRAKRTPSPL----ILDQSYINTKNHVIKAERRILKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDCLR 213 The following BLAST results are available for this feature:
BLAST of DN617477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617477 ID=DN617477; Name=DN617477; organism=Citrus sinensis; type=EST; length=602bpback to top |