DN617388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_SOLTU (Aminomethyltransferase, mitochondrial OS=Solanum tuberosum GN=GDCST PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 1.201e-51 Identity = 94/118 (79.66%), Postives = 104/118 (88.14%), Query Frame = -3 Query: 116 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKP 469 EAGLTWAI KRRRAEGGFLGAE ILKQ++EGP +RRVGFF+ GPP RSHS++ D G IGEITSGGFSPCLKKNIAMGYVK+G HKAGT VKI +RGK+YDG +TKMPFVPTKYYKP Sbjct: 289 EAGLTWAIGKRRRAEGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRSHSEIQDSNGQNIGEITSGGFSPCLKKNIAMGYVKTGNHKAGTNVKIVIRGKSYDGVVTKMPFVPTKYYKP 406
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_ARATH (Aminomethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=GDCST PE=1 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 1.201e-51 Identity = 97/119 (81.51%), Postives = 106/119 (89.08%), Query Frame = -3 Query: 113 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 469 EAGLTWAI KRRRAEGGFLGA+ IL+QL +GP +RRVGFF+ GPPARSHS+VHDE GN IGEITSGGFSP LKKNIAMGYVKSG HK GTKVKI VRGK Y+G+ITKMPFV TKYYKP+ Sbjct: 290 EAGLTWAIGKRRRAEGGFLGADVILQQLKDGPTIRRVGFFSSGPPARSHSEVHDESGNKIGEITSGGFSPNLKKNIAMGYVKSGQHKTGTKVKILVRGKPYEGSITKMPFVATKYYKPT 408
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_FLATR (Aminomethyltransferase, mitochondrial OS=Flaveria trinervia GN=GDCST PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 2.676e-51 Identity = 92/119 (77.31%), Postives = 106/119 (89.08%), Query Frame = -3 Query: 113 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 469 EAGLTWAI KRRRAEGGFLGAE ILKQ+ +GP +RRVG F+ GPPARSHS++ +EQG IGE+TSGGFSPCLKKNI MGYVKSGLHK GTK+KI +RGK Y+G++TKMPFVPTKYYKP+ Sbjct: 289 EAGLTWAIGKRRRAEGGFLGAEVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEQGENIGEVTSGGFSPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKPA 407
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_PEA (Aminomethyltransferase, mitochondrial OS=Pisum sativum GN=GDCST PE=1 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 7.786e-51 Identity = 94/119 (78.99%), Postives = 105/119 (88.24%), Query Frame = -3 Query: 113 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 469 EAGLTWAI KRRRAEGGFLGA+ ILKQL +GP +RRVGF + GPP RSHS++ DE GN IGE+TSGGFSPCLKKNIA+GYVKSGLHKAGTKVKI +RGK +G +TKMPFVPTKYYKPS Sbjct: 290 EAGLTWAIGKRRRAEGGFLGADVILKQLADGPSIRRVGFISSGPPPRSHSEIQDEGGNNIGEVTSGGFSPCLKKNIAIGYVKSGLHKAGTKVKIIIRGKQNEGVVTKMPFVPTKYYKPS 408
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_FLAPR (Aminomethyltransferase, mitochondrial OS=Flaveria pringlei GN=GDCST PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.734e-50 Identity = 90/119 (75.63%), Postives = 106/119 (89.08%), Query Frame = -3 Query: 113 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 469 EAGLTWAI KRRRAEGGFLGA+ ILKQ+ +GP +RRVG F+ GPPARSHS++ +E+G IGE+TSGGFSPCLKKNI MGYVKSGLHK GTK+KI +RGK Y+G++TKMPFVPTKYYKP+ Sbjct: 289 EAGLTWAIGKRRRAEGGFLGADVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEKGENIGEVTSGGFSPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKPA 407
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_FLAAN (Aminomethyltransferase, mitochondrial OS=Flaveria anomala GN=GDCST PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.734e-50 Identity = 90/119 (75.63%), Postives = 106/119 (89.08%), Query Frame = -3 Query: 113 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 469 EAGLTWAI KRRRAEGGFLGA+ ILKQ+ +GP +RRVG F+ GPPARSHS++ +E+G IGE+TSGGFSPCLKKNI MGYVKSGLHK GTK+KI +RGK Y+G++TKMPFVPTKYYKP+ Sbjct: 289 EAGLTWAIGKRRRAEGGFLGADVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEKGENIGEVTSGGFSPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKPA 407
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_MESCR (Aminomethyltransferase, mitochondrial OS=Mesembryanthemum crystallinum GN=GDCST PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 1.468e-49 Identity = 92/117 (78.63%), Postives = 102/117 (87.18%), Query Frame = -3 Query: 119 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 469 EAGLTWA+ KRRRAEGGFLGAE ILKQ+ +GPP RRVGF + GPPAR HS++ +E+G IGEITSGGFSPCLKKNIAMGYVKSG HKAGTKV I VRGK Y+G +TKMPFVPTKYYK Sbjct: 290 EAGLTWAVGKRRRAEGGFLGAEVILKQIADGPPQRRVGFISSGPPARGHSEIQNEKGESIGEITSGGFSPCLKKNIAMGYVKSGNHKAGTKVNILVRGKPYEGVVTKMPFVPTKYYK 406
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_SCHPO (Probable aminomethyltransferase, mitochondrial OS=Schizosaccharomyces pombe GN=gcv1 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.210e-27 Identity = 60/117 (51.28%), Postives = 77/117 (65.81%), Query Frame = -3 Query: 119 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 469 E L+W I KRRR EGGF+G+ +ILK+L +GP RRVGF PAR H + G +G++TSG SP L KNIAMGY+ +GLH+ GT I+VR K + + +MPFV T YYK Sbjct: 272 EGSLSWIIGKRRRKEGGFVGSSRILKELKDGPSRRRVGFIVEKVPAR-HGSAVEVDGVEVGQVTSGCPSPTLGKNIAMGYISTGLHQVGTPAHIKVRNKLHPAQVVRMPFVETHYYK 387
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_CHICK (Aminomethyltransferase, mitochondrial OS=Gallus gallus GN=AMT PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 2.788e-24 Identity = 56/116 (48.28%), Postives = 74/116 (63.79%), Query Frame = -3 Query: 122 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 469 EAGL W + KRRR F GA I++Q+ E P +RVG + GPP R + + +G P+G +TSG SP L KNIAMGYV++ + GT + +EVR K + +TKMPFVPT YY Sbjct: 274 EAGLLWTLGKRRRTAMDFPGAAIIMEQVKEKPKRKRVGLTSVGPPLRPPAAILGPEGTPVGTVTSGCPSPSLGKNIAMGYVQAAHSRPGTTLTVEVRKKQHPALVTKMPFVPTHYY 389
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_DICDI (Aminomethyltransferase, mitochondrial OS=Dictyostelium discoideum GN=gcvT PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.060e-23 Identity = 59/119 (49.58%), Postives = 73/119 (61.34%), Query Frame = -3 Query: 119 EAGLTWAIEKRRRAEGGFLGAEKILKQLD-EGPPVRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 469 EA L W I KRRR EGGF GA I KQL +G P +RVG G PAR + D N IG++TSG SP +++I+M YVK+ K GT+V + +RGK I+KMPFVPT Y K Sbjct: 284 EASLNWLISKRRREEGGFPGASIIQKQLQKDGCPQKRVGVIINGAPAREGCLILDPSTNQEIGKVTSGTISPITRQSISMAYVKTPFSKIGTQVNVSIRGKPITATISKMPFVPTNYKK 402 The following BLAST results are available for this feature:
BLAST of DN617388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617388 ID=DN617388; Name=DN617388; organism=Citrus sinensis; type=EST; length=471bpback to top |